Experiment: Cobalt chloride 80 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_04410 and IAI46_04415 are separated by 324 nucleotides IAI46_04415 and IAI46_04420 are separated by 144 nucleotides IAI46_04420 and IAI46_04425 are separated by 60 nucleotides IAI46_04425 and IAI46_04430 are separated by 115 nucleotides
IAI46_04410: IAI46_04410 - beta-Ala-His dipeptidase, at 943,554 to 945,014
_04410
IAI46_04415: IAI46_04415 - xanthine phosphoribosyltransferase, at 945,339 to 945,797
_04415
IAI46_04420: IAI46_04420 - esterase FrsA, at 945,942 to 947,189
_04420
IAI46_04425: IAI46_04425 - sigma factor-binding protein Crl, at 947,250 to 947,651
_04425
IAI46_04430: IAI46_04430 - glutamate 5-kinase, at 947,767 to 948,870
_04430
Position (kb) 945
946
947
948 Strain fitness (log2 ratio) -2
-1
0
1
2 at 944.951 kb on + strand at 944.952 kb on - strand at 944.952 kb on - strand at 945.017 kb on + strand at 945.017 kb on + strand at 945.110 kb on + strand at 945.170 kb on + strand at 945.171 kb on - strand at 945.220 kb on + strand at 945.238 kb on + strand at 945.267 kb on + strand at 945.298 kb on + strand at 945.298 kb on + strand at 945.299 kb on - strand at 945.306 kb on - strand at 945.306 kb on - strand at 945.338 kb on + strand at 945.338 kb on + strand at 945.339 kb on - strand at 945.415 kb on + strand, within IAI46_04415 at 945.511 kb on + strand, within IAI46_04415 at 945.511 kb on + strand, within IAI46_04415 at 945.512 kb on - strand, within IAI46_04415 at 945.525 kb on + strand, within IAI46_04415 at 945.526 kb on - strand, within IAI46_04415 at 945.526 kb on - strand, within IAI46_04415 at 945.526 kb on - strand, within IAI46_04415 at 945.624 kb on - strand, within IAI46_04415 at 945.648 kb on + strand, within IAI46_04415 at 945.649 kb on - strand, within IAI46_04415 at 945.649 kb on - strand, within IAI46_04415 at 945.649 kb on - strand, within IAI46_04415 at 945.712 kb on - strand, within IAI46_04415 at 945.818 kb on - strand at 945.849 kb on - strand at 945.872 kb on + strand at 945.876 kb on + strand at 945.876 kb on + strand at 945.877 kb on - strand at 945.877 kb on - strand at 945.877 kb on - strand at 945.881 kb on + strand at 945.882 kb on - strand at 945.882 kb on - strand at 945.882 kb on - strand at 945.896 kb on - strand at 945.911 kb on + strand at 945.911 kb on + strand at 945.912 kb on - strand at 945.912 kb on - strand at 945.923 kb on + strand at 945.924 kb on - strand at 945.986 kb on + strand at 945.986 kb on + strand at 945.987 kb on - strand at 945.987 kb on - strand at 946.094 kb on + strand, within IAI46_04420 at 946.094 kb on + strand, within IAI46_04420 at 946.437 kb on + strand, within IAI46_04420 at 946.438 kb on - strand, within IAI46_04420 at 946.439 kb on + strand, within IAI46_04420 at 946.440 kb on - strand, within IAI46_04420 at 946.653 kb on + strand, within IAI46_04420 at 946.654 kb on - strand, within IAI46_04420 at 946.654 kb on - strand, within IAI46_04420 at 946.654 kb on - strand, within IAI46_04420 at 946.654 kb on - strand, within IAI46_04420 at 946.783 kb on + strand, within IAI46_04420 at 946.794 kb on + strand, within IAI46_04420 at 946.795 kb on - strand, within IAI46_04420 at 946.893 kb on + strand, within IAI46_04420 at 946.893 kb on + strand, within IAI46_04420 at 946.894 kb on - strand, within IAI46_04420 at 946.894 kb on - strand, within IAI46_04420 at 946.894 kb on - strand, within IAI46_04420 at 946.894 kb on - strand, within IAI46_04420 at 946.894 kb on - strand, within IAI46_04420 at 946.894 kb on - strand, within IAI46_04420 at 946.968 kb on + strand, within IAI46_04420 at 946.968 kb on + strand, within IAI46_04420 at 946.968 kb on + strand, within IAI46_04420 at 946.969 kb on - strand, within IAI46_04420 at 946.969 kb on - strand, within IAI46_04420 at 947.127 kb on + strand at 947.127 kb on + strand at 947.231 kb on - strand at 947.381 kb on + strand, within IAI46_04425 at 947.381 kb on + strand, within IAI46_04425 at 947.454 kb on + strand, within IAI46_04425 at 947.455 kb on - strand, within IAI46_04425 at 947.460 kb on + strand, within IAI46_04425 at 947.511 kb on - strand, within IAI46_04425 at 947.669 kb on + strand at 947.669 kb on + strand at 947.669 kb on + strand at 947.669 kb on + strand at 947.669 kb on + strand at 947.670 kb on - strand at 947.670 kb on - strand at 947.670 kb on - strand at 947.670 kb on - strand at 947.719 kb on + strand at 947.720 kb on - strand at 947.739 kb on + strand at 947.739 kb on + strand at 947.740 kb on - strand at 947.750 kb on + strand at 947.750 kb on + strand at 947.751 kb on - strand at 947.763 kb on + strand at 947.763 kb on + strand at 947.763 kb on + strand at 947.764 kb on - strand at 947.766 kb on + strand at 947.835 kb on + strand at 947.836 kb on - strand at 947.861 kb on + strand at 947.862 kb on - strand at 948.151 kb on - strand, within IAI46_04430 at 948.151 kb on - strand, within IAI46_04430 at 948.151 kb on - strand, within IAI46_04430
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 80 uM, aerobic remove 944,951 + +0.6 944,952 - -0.3 944,952 - -0.8 945,017 + +0.3 945,017 + -1.4 945,110 + +0.3 945,170 + +0.0 945,171 - +0.8 945,220 + +0.2 945,238 + +0.0 945,267 + +0.3 945,298 + -0.5 945,298 + +0.5 945,299 - -0.1 945,306 - -0.2 945,306 - +0.0 945,338 + +0.8 945,338 + +0.1 945,339 - -0.8 945,415 + IAI46_04415 0.17 +1.9 945,511 + IAI46_04415 0.37 +0.1 945,511 + IAI46_04415 0.37 -0.7 945,512 - IAI46_04415 0.38 +0.6 945,525 + IAI46_04415 0.41 -0.1 945,526 - IAI46_04415 0.41 -0.6 945,526 - IAI46_04415 0.41 +0.9 945,526 - IAI46_04415 0.41 -0.2 945,624 - IAI46_04415 0.62 -1.0 945,648 + IAI46_04415 0.67 -1.1 945,649 - IAI46_04415 0.68 -0.4 945,649 - IAI46_04415 0.68 +0.2 945,649 - IAI46_04415 0.68 +0.5 945,712 - IAI46_04415 0.81 -0.4 945,818 - -0.1 945,849 - +1.1 945,872 + +0.9 945,876 + +0.3 945,876 + +0.4 945,877 - +0.1 945,877 - +0.2 945,877 - -1.7 945,881 + +0.6 945,882 - -1.5 945,882 - +0.3 945,882 - +0.9 945,896 - -0.0 945,911 + -0.2 945,911 + -2.1 945,912 - -0.3 945,912 - +0.0 945,923 + -0.7 945,924 - -0.7 945,986 + -0.5 945,986 + +1.0 945,987 - -0.8 945,987 - +0.6 946,094 + IAI46_04420 0.12 -0.4 946,094 + IAI46_04420 0.12 +0.7 946,437 + IAI46_04420 0.40 -0.3 946,438 - IAI46_04420 0.40 +0.3 946,439 + IAI46_04420 0.40 -0.0 946,440 - IAI46_04420 0.40 -0.4 946,653 + IAI46_04420 0.57 -0.3 946,654 - IAI46_04420 0.57 +1.3 946,654 - IAI46_04420 0.57 +0.3 946,654 - IAI46_04420 0.57 +0.7 946,654 - IAI46_04420 0.57 -0.0 946,783 + IAI46_04420 0.67 -0.3 946,794 + IAI46_04420 0.68 +1.2 946,795 - IAI46_04420 0.68 +0.7 946,893 + IAI46_04420 0.76 -0.9 946,893 + IAI46_04420 0.76 -0.3 946,894 - IAI46_04420 0.76 +0.8 946,894 - IAI46_04420 0.76 -0.0 946,894 - IAI46_04420 0.76 -0.5 946,894 - IAI46_04420 0.76 +0.0 946,894 - IAI46_04420 0.76 -0.3 946,894 - IAI46_04420 0.76 +0.7 946,968 + IAI46_04420 0.82 +0.1 946,968 + IAI46_04420 0.82 +0.6 946,968 + IAI46_04420 0.82 +0.9 946,969 - IAI46_04420 0.82 -0.6 946,969 - IAI46_04420 0.82 +0.1 947,127 + +0.1 947,127 + -0.3 947,231 - -0.3 947,381 + IAI46_04425 0.33 +0.0 947,381 + IAI46_04425 0.33 +0.7 947,454 + IAI46_04425 0.51 +0.5 947,455 - IAI46_04425 0.51 +0.2 947,460 + IAI46_04425 0.52 +0.6 947,511 - IAI46_04425 0.65 +2.2 947,669 + +0.4 947,669 + -0.2 947,669 + +1.6 947,669 + -0.1 947,669 + +0.0 947,670 - -0.1 947,670 - -0.7 947,670 - -0.2 947,670 - +0.3 947,719 + +0.0 947,720 - -0.7 947,739 + -0.4 947,739 + -0.3 947,740 - -0.1 947,750 + -0.1 947,750 + +0.3 947,751 - -0.2 947,763 + -0.1 947,763 + -0.2 947,763 + +0.0 947,764 - -0.0 947,766 + -0.5 947,835 + -0.2 947,836 - -0.5 947,861 + -0.2 947,862 - +0.9 948,151 - IAI46_04430 0.35 +0.8 948,151 - IAI46_04430 0.35 -0.0 948,151 - IAI46_04430 0.35 -0.8
Or see this region's nucleotide sequence