Strain Fitness in Serratia liquefaciens MT49 around IAI46_00045

Experiment: Cobalt chloride 80 uM, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cobalt chloride 80 uM, aerobic
9,573	+		IAI46_00040	0.27	+0.1
9,604	+		IAI46_00040	0.29	-0.1
9,604	+		IAI46_00040	0.29	-0.2
9,605	-		IAI46_00040	0.29	+0.5
9,605	-		IAI46_00040	0.29	-0.5
9,605	-		IAI46_00040	0.29	-0.2
9,605	-		IAI46_00040	0.29	+0.1
9,606	+		IAI46_00040	0.29	+0.3
9,606	+		IAI46_00040	0.29	+0.3
9,607	-		IAI46_00040	0.30	-0.3
9,607	-		IAI46_00040	0.30	+0.0
9,607	-		IAI46_00040	0.30	+0.2
9,607	-		IAI46_00040	0.30	+0.4
9,638	+		IAI46_00040	0.32	-0.0
9,639	-		IAI46_00040	0.32	+0.2
9,639	-		IAI46_00040	0.32	+1.0
9,675	+		IAI46_00040	0.35	+0.2
9,675	+		IAI46_00040	0.35	-0.0
9,675	+		IAI46_00040	0.35	+0.6
9,676	-		IAI46_00040	0.35	+0.3
9,676	-		IAI46_00040	0.35	+1.1
9,679	+		IAI46_00040	0.35	-0.1
9,679	+		IAI46_00040	0.35	+0.4
9,679	+		IAI46_00040	0.35	+0.3
9,679	+		IAI46_00040	0.35	+0.8
9,679	+		IAI46_00040	0.35	+0.1
9,679	+		IAI46_00040	0.35	+0.3
9,680	-		IAI46_00040	0.35	-0.2
9,680	-		IAI46_00040	0.35	-0.4
9,680	-		IAI46_00040	0.35	-1.1
9,680	-		IAI46_00040	0.35	-0.1
9,681	+		IAI46_00040	0.35	+0.4
9,727	-		IAI46_00040	0.39	+0.5
9,788	-		IAI46_00040	0.44	-1.1
9,802	+		IAI46_00040	0.45	+0.3
9,802	+		IAI46_00040	0.45	-0.4
9,802	+		IAI46_00040	0.45	+0.6
9,803	-		IAI46_00040	0.45	+0.2
9,826	-		IAI46_00040	0.47	-0.9
9,898	+		IAI46_00040	0.52	+0.8
9,898	+		IAI46_00040	0.52	-0.5
9,898	+		IAI46_00040	0.52	+0.2
9,898	+		IAI46_00040	0.52	+0.0
9,899	-		IAI46_00040	0.52	-0.7
9,899	-		IAI46_00040	0.52	+0.1
9,902	+		IAI46_00040	0.53	+0.3
9,902	+		IAI46_00040	0.53	+0.3
9,903	-		IAI46_00040	0.53	-0.2
9,903	-		IAI46_00040	0.53	-0.9
9,903	-		IAI46_00040	0.53	-1.6
9,903	-		IAI46_00040	0.53	+0.2
9,903	-		IAI46_00040	0.53	+0.4
9,903	-		IAI46_00040	0.53	-0.4
9,903	-		IAI46_00040	0.53	+0.2
9,943	-		IAI46_00040	0.56	+0.2
9,986	+		IAI46_00040	0.59	+0.3
10,021	+		IAI46_00040	0.62	-1.5
10,021	+		IAI46_00040	0.62	-0.2
10,197	-		IAI46_00040	0.76	-0.5
10,197	-		IAI46_00040	0.76	-0.6
10,197	-		IAI46_00040	0.76	-0.4
10,220	+		IAI46_00040	0.77	+0.9
10,221	-		IAI46_00040	0.77	-0.2
10,221	-		IAI46_00040	0.77	+0.2
10,221	-		IAI46_00040	0.77	-1.4
10,425	+				+0.1
10,425	+				-0.6
10,430	+				+0.1
10,462	-				+0.3
10,547	+				-0.2
10,548	-				-0.1
10,673	+		IAI46_00045	0.37	+1.3
10,674	-		IAI46_00045	0.37	-1.1
10,681	+		IAI46_00045	0.39	+0.5
10,684	+		IAI46_00045	0.40	+0.9
10,684	+		IAI46_00045	0.40	+0.2
10,684	+		IAI46_00045	0.40	-2.0
10,684	+		IAI46_00045	0.40	-0.6
10,684	+		IAI46_00045	0.40	+0.7
10,685	-		IAI46_00045	0.40	+0.6
10,685	-		IAI46_00045	0.40	-1.4
10,685	-		IAI46_00045	0.40	-0.5
10,685	-		IAI46_00045	0.40	-0.2
10,685	-		IAI46_00045	0.40	+0.3
10,749	+		IAI46_00045	0.59	-0.1
10,750	-		IAI46_00045	0.59	-0.3
10,750	-		IAI46_00045	0.59	+1.1
10,750	-		IAI46_00045	0.59	+0.5
10,767	+		IAI46_00045	0.64	+0.0
10,768	-		IAI46_00045	0.64	+0.1
10,768	-		IAI46_00045	0.64	-0.4
10,768	-		IAI46_00045	0.64	-0.4
10,793	+		IAI46_00045	0.72	+0.1
10,793	+		IAI46_00045	0.72	-0.7
10,793	+		IAI46_00045	0.72	-0.2
10,794	-		IAI46_00045	0.72	+0.1
10,796	+		IAI46_00045	0.72	-0.1
10,796	+		IAI46_00045	0.72	-0.2
10,797	-		IAI46_00045	0.73	+1.1
10,825	+		IAI46_00045	0.81	-0.4
10,825	+		IAI46_00045	0.81	+0.6
10,825	+		IAI46_00045	0.81	-0.1
10,826	-		IAI46_00045	0.81	-1.0
10,826	-		IAI46_00045	0.81	-0.1
10,849	+		IAI46_00045	0.88	+0.1
10,870	+				+0.2
10,870	+				+0.0
10,871	-				-1.1
10,871	-				-0.2
10,871	-				-0.2
10,879	+				-1.0
10,932	+				+1.1
10,932	+				-0.8
10,932	+				+0.0
10,932	+				+1.6
10,932	+				-2.4
10,933	-				-0.9
10,933	-				-0.2
10,933	-				+0.1
10,933	-				-0.1
10,933	-				-0.9
10,933	-				+0.0
10,933	-				-0.2
10,934	+				+0.1
10,934	+				-0.4
10,954	-				+0.2
10,994	+				-0.0
10,994	+				-2.2
10,995	-				+0.1
11,000	-				+0.2
11,084	+				+0.3
11,084	+				+0.2
11,084	+				+0.7
11,130	+				-0.1
11,130	+				-0.0
11,131	-				-0.4
11,153	+				-0.2
11,153	+				-1.3
11,154	-				+0.1
11,154	-				-1.0
11,157	+				-1.3
11,158	-				+0.2
11,180	+				-0.1
11,193	+				-0.4
11,199	+				-0.9
11,200	-				-0.4
11,222	-				+0.1
11,302	+		IAI46_00050	0.26	-0.2
11,302	+		IAI46_00050	0.26	+0.7
11,302	+		IAI46_00050	0.26	+0.1
11,302	+		IAI46_00050	0.26	+0.0
11,303	-		IAI46_00050	0.26	+0.2
11,303	-		IAI46_00050	0.26	+0.1
11,304	+		IAI46_00050	0.27	-0.5
11,305	-		IAI46_00050	0.27	+0.4
11,405	+		IAI46_00050	0.51	+0.3
11,421	+		IAI46_00050	0.55	+0.2
11,446	+		IAI46_00050	0.61	-0.1
11,447	-		IAI46_00050	0.61	+0.2
11,450	+		IAI46_00050	0.62	-0.0
11,450	+		IAI46_00050	0.62	-0.6
11,450	+		IAI46_00050	0.62	-1.2
11,451	-		IAI46_00050	0.62	+0.2
11,451	-		IAI46_00050	0.62	+0.1
11,451	-		IAI46_00050	0.62	-0.2
11,451	-		IAI46_00050	0.62	+0.6
11,451	-		IAI46_00050	0.62	-0.0
11,452	+		IAI46_00050	0.62	+0.4
11,452	+		IAI46_00050	0.62	+0.1
11,452	+		IAI46_00050	0.62	-0.6
11,453	-		IAI46_00050	0.63	-0.1
11,453	-		IAI46_00050	0.63	-0.0
11,515	-		IAI46_00050	0.78	-0.1
11,515	-		IAI46_00050	0.78	+1.3
11,545	+		IAI46_00050	0.85	-0.7
11,545	+		IAI46_00050	0.85	+0.3
11,545	+		IAI46_00050	0.85	-1.2
11,546	-		IAI46_00050	0.85	+0.1
11,546	-		IAI46_00050	0.85	+0.1
11,553	+		IAI46_00050	0.87	+0.6
11,592	+				+0.1
11,594	+				-1.5
11,594	+				+0.2
11,612	+				-0.6
11,613	-				+0.2
11,669	+				+0.8
11,669	+				+0.8
11,674	+				+0.7
11,675	-				+0.6
11,675	-				-0.1
11,679	+				+0.2
11,684	+				-0.6
11,685	-				+0.2
11,687	-				+1.1
11,698	+				-0.1
11,704	+				+0.2
11,719	+				-0.1
11,719	+				+0.1
11,720	-				+0.4
11,720	-				-1.2
11,720	-				-0.4
11,720	-				+0.2
11,720	-				-0.1
11,730	+				-0.1
11,730	+				+1.1
11,730	+				-0.3
11,730	+				-0.9
11,731	-				+1.4
11,741	+				-1.1
11,741	+				+1.6
11,741	+				-1.1
11,741	+				-0.5
11,835	+		IAI46_00055	0.23	-0.3