Experiment: m.b. Thallium(I) acetate 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4565 and Echvi_4566 are separated by 91 nucleotides Echvi_4566 and Echvi_4567 are separated by 342 nucleotides
Echvi_4565: Echvi_4565 - Fe2+-dicitrate sensor, membrane component, at 5,466,077 to 5,467,051
_4565
Echvi_4566: Echvi_4566 - RNA polymerase sigma-70 factor, Bacteroides expansion family 1, at 5,467,143 to 5,467,706
_4566
Echvi_4567: Echvi_4567 - Outer membrane receptor proteins, mostly Fe transport, at 5,468,049 to 5,470,421
_4567
Position (kb)
5467
5468 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 5466.228 kb on + strand, within Echvi_4565 at 5466.250 kb on + strand at 5466.255 kb on + strand, within Echvi_4565 at 5466.255 kb on + strand, within Echvi_4565 at 5466.255 kb on + strand, within Echvi_4565 at 5466.256 kb on - strand, within Echvi_4565 at 5466.259 kb on - strand, within Echvi_4565 at 5466.383 kb on + strand, within Echvi_4565 at 5466.655 kb on + strand, within Echvi_4565 at 5466.656 kb on - strand, within Echvi_4565 at 5466.676 kb on + strand, within Echvi_4565 at 5466.676 kb on + strand, within Echvi_4565 at 5466.837 kb on + strand, within Echvi_4565 at 5466.838 kb on - strand, within Echvi_4565 at 5466.892 kb on + strand, within Echvi_4565 at 5466.951 kb on + strand, within Echvi_4565 at 5466.951 kb on + strand, within Echvi_4565 at 5466.951 kb on + strand, within Echvi_4565 at 5466.952 kb on - strand, within Echvi_4565 at 5466.953 kb on + strand, within Echvi_4565 at 5466.954 kb on - strand at 5467.069 kb on + strand at 5467.099 kb on - strand at 5467.131 kb on - strand at 5467.264 kb on - strand, within Echvi_4566 at 5467.277 kb on + strand, within Echvi_4566 at 5467.278 kb on - strand, within Echvi_4566 at 5467.300 kb on + strand, within Echvi_4566 at 5467.301 kb on - strand, within Echvi_4566 at 5467.356 kb on + strand, within Echvi_4566 at 5467.367 kb on + strand, within Echvi_4566 at 5467.368 kb on - strand, within Echvi_4566 at 5467.400 kb on + strand, within Echvi_4566 at 5467.401 kb on - strand, within Echvi_4566 at 5467.401 kb on - strand, within Echvi_4566 at 5467.431 kb on + strand, within Echvi_4566 at 5467.431 kb on + strand, within Echvi_4566 at 5467.432 kb on - strand, within Echvi_4566 at 5467.509 kb on + strand, within Echvi_4566 at 5467.509 kb on + strand, within Echvi_4566 at 5467.510 kb on - strand, within Echvi_4566 at 5467.603 kb on + strand, within Echvi_4566 at 5467.604 kb on - strand, within Echvi_4566 at 5467.679 kb on - strand at 5467.716 kb on + strand at 5467.716 kb on + strand at 5467.716 kb on + strand at 5467.717 kb on - strand at 5467.717 kb on - strand at 5467.717 kb on - strand at 5467.846 kb on + strand at 5467.847 kb on - strand at 5467.935 kb on + strand at 5467.936 kb on - strand at 5468.021 kb on + strand at 5468.022 kb on - strand at 5468.028 kb on + strand at 5468.041 kb on - strand at 5468.048 kb on + strand at 5468.048 kb on + strand at 5468.058 kb on - strand at 5468.084 kb on - strand at 5468.096 kb on - strand at 5468.262 kb on + strand at 5468.263 kb on - strand at 5468.345 kb on + strand, within Echvi_4567 at 5468.345 kb on + strand, within Echvi_4567 at 5468.345 kb on + strand, within Echvi_4567 at 5468.346 kb on - strand, within Echvi_4567 at 5468.346 kb on - strand, within Echvi_4567 at 5468.346 kb on - strand, within Echvi_4567 at 5468.346 kb on - strand, within Echvi_4567 at 5468.346 kb on - strand, within Echvi_4567 at 5468.543 kb on + strand, within Echvi_4567 at 5468.543 kb on + strand, within Echvi_4567 at 5468.543 kb on + strand, within Echvi_4567 at 5468.543 kb on + strand, within Echvi_4567 at 5468.543 kb on + strand, within Echvi_4567 at 5468.544 kb on - strand, within Echvi_4567 at 5468.587 kb on + strand, within Echvi_4567 at 5468.642 kb on + strand, within Echvi_4567 at 5468.676 kb on + strand, within Echvi_4567 at 5468.676 kb on + strand, within Echvi_4567 at 5468.677 kb on - strand, within Echvi_4567 at 5468.678 kb on + strand, within Echvi_4567 at 5468.678 kb on + strand, within Echvi_4567
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.05 mg/ml remove 5,466,228 + Echvi_4565 0.15 +1.3 5,466,250 + +0.9 5,466,255 + Echvi_4565 0.18 +0.3 5,466,255 + Echvi_4565 0.18 -1.9 5,466,255 + Echvi_4565 0.18 -1.1 5,466,256 - Echvi_4565 0.18 +1.3 5,466,259 - Echvi_4565 0.19 +0.2 5,466,383 + Echvi_4565 0.31 -0.6 5,466,655 + Echvi_4565 0.59 -0.5 5,466,656 - Echvi_4565 0.59 +0.1 5,466,676 + Echvi_4565 0.61 -0.7 5,466,676 + Echvi_4565 0.61 -0.2 5,466,837 + Echvi_4565 0.78 -1.2 5,466,838 - Echvi_4565 0.78 +1.0 5,466,892 + Echvi_4565 0.84 -0.3 5,466,951 + Echvi_4565 0.90 +1.2 5,466,951 + Echvi_4565 0.90 -1.1 5,466,951 + Echvi_4565 0.90 -0.8 5,466,952 - Echvi_4565 0.90 +0.1 5,466,953 + Echvi_4565 0.90 +0.8 5,466,954 - +0.3 5,467,069 + -0.7 5,467,099 - +0.7 5,467,131 - +0.9 5,467,264 - Echvi_4566 0.21 -0.5 5,467,277 + Echvi_4566 0.24 -1.3 5,467,278 - Echvi_4566 0.24 +0.1 5,467,300 + Echvi_4566 0.28 +1.1 5,467,301 - Echvi_4566 0.28 +0.2 5,467,356 + Echvi_4566 0.38 -0.1 5,467,367 + Echvi_4566 0.40 +0.1 5,467,368 - Echvi_4566 0.40 -0.2 5,467,400 + Echvi_4566 0.46 -1.5 5,467,401 - Echvi_4566 0.46 -1.6 5,467,401 - Echvi_4566 0.46 -0.1 5,467,431 + Echvi_4566 0.51 -1.5 5,467,431 + Echvi_4566 0.51 -0.0 5,467,432 - Echvi_4566 0.51 -1.2 5,467,509 + Echvi_4566 0.65 -0.5 5,467,509 + Echvi_4566 0.65 -0.7 5,467,510 - Echvi_4566 0.65 +0.2 5,467,603 + Echvi_4566 0.82 +1.3 5,467,604 - Echvi_4566 0.82 +0.9 5,467,679 - -0.2 5,467,716 + -0.4 5,467,716 + -2.2 5,467,716 + +0.6 5,467,717 - +0.7 5,467,717 - -0.1 5,467,717 - -0.1 5,467,846 + -1.4 5,467,847 - -0.4 5,467,935 + +0.9 5,467,936 - -0.3 5,468,021 + +0.4 5,468,022 - -3.0 5,468,028 + -0.4 5,468,041 - +0.6 5,468,048 + -0.5 5,468,048 + -1.3 5,468,058 - -0.4 5,468,084 - +0.3 5,468,096 - +0.0 5,468,262 + +0.8 5,468,263 - -0.4 5,468,345 + Echvi_4567 0.12 -0.3 5,468,345 + Echvi_4567 0.12 +0.5 5,468,345 + Echvi_4567 0.12 +0.3 5,468,346 - Echvi_4567 0.13 -2.5 5,468,346 - Echvi_4567 0.13 +1.0 5,468,346 - Echvi_4567 0.13 -1.4 5,468,346 - Echvi_4567 0.13 +1.5 5,468,346 - Echvi_4567 0.13 +1.3 5,468,543 + Echvi_4567 0.21 -0.3 5,468,543 + Echvi_4567 0.21 -0.2 5,468,543 + Echvi_4567 0.21 -0.1 5,468,543 + Echvi_4567 0.21 -2.5 5,468,543 + Echvi_4567 0.21 -0.3 5,468,544 - Echvi_4567 0.21 +0.3 5,468,587 + Echvi_4567 0.23 +0.4 5,468,642 + Echvi_4567 0.25 +0.0 5,468,676 + Echvi_4567 0.26 +0.2 5,468,676 + Echvi_4567 0.26 +0.8 5,468,677 - Echvi_4567 0.26 +1.0 5,468,678 + Echvi_4567 0.27 -0.3 5,468,678 + Echvi_4567 0.27 -0.5
Or see this region's nucleotide sequence