Experiment: m.b. Thallium(I) acetate 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3928 and Echvi_3929 are separated by 95 nucleotides Echvi_3929 and Echvi_3930 are separated by 85 nucleotides
Echvi_3928: Echvi_3928 - Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 4,703,628 to 4,704,386
_3928
Echvi_3929: Echvi_3929 - Transcriptional regulator, at 4,704,482 to 4,705,063
_3929
Echvi_3930: Echvi_3930 - Alpha-L-fucosidase, at 4,705,149 to 4,706,615
_3930
Position (kb)
4704
4705
4706 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4703.614 kb on + strand at 4703.615 kb on - strand at 4703.615 kb on - strand at 4703.627 kb on + strand at 4703.639 kb on - strand at 4703.762 kb on - strand, within Echvi_3928 at 4703.776 kb on + strand, within Echvi_3928 at 4703.972 kb on + strand, within Echvi_3928 at 4703.972 kb on + strand, within Echvi_3928 at 4704.042 kb on + strand, within Echvi_3928 at 4704.069 kb on + strand, within Echvi_3928 at 4704.069 kb on + strand, within Echvi_3928 at 4704.069 kb on + strand, within Echvi_3928 at 4704.069 kb on + strand, within Echvi_3928 at 4704.070 kb on - strand, within Echvi_3928 at 4704.070 kb on - strand, within Echvi_3928 at 4704.292 kb on + strand, within Echvi_3928 at 4704.340 kb on - strand at 4704.340 kb on - strand at 4704.379 kb on + strand at 4704.380 kb on - strand at 4704.384 kb on + strand at 4704.454 kb on + strand at 4704.455 kb on - strand at 4704.455 kb on - strand at 4704.473 kb on + strand at 4704.474 kb on - strand at 4704.477 kb on - strand at 4704.494 kb on - strand at 4704.494 kb on - strand at 4704.554 kb on + strand, within Echvi_3929 at 4704.557 kb on + strand, within Echvi_3929 at 4704.558 kb on - strand, within Echvi_3929 at 4704.568 kb on + strand, within Echvi_3929 at 4704.568 kb on + strand, within Echvi_3929 at 4704.569 kb on - strand, within Echvi_3929 at 4704.615 kb on - strand, within Echvi_3929 at 4704.615 kb on - strand, within Echvi_3929 at 4704.666 kb on - strand, within Echvi_3929 at 4704.667 kb on + strand, within Echvi_3929 at 4704.667 kb on + strand, within Echvi_3929 at 4704.667 kb on + strand, within Echvi_3929 at 4704.667 kb on + strand, within Echvi_3929 at 4704.667 kb on + strand, within Echvi_3929 at 4704.667 kb on + strand, within Echvi_3929 at 4704.667 kb on + strand, within Echvi_3929 at 4704.668 kb on - strand, within Echvi_3929 at 4704.668 kb on - strand, within Echvi_3929 at 4704.668 kb on - strand, within Echvi_3929 at 4704.668 kb on - strand, within Echvi_3929 at 4704.668 kb on - strand, within Echvi_3929 at 4704.893 kb on + strand, within Echvi_3929 at 4704.897 kb on + strand, within Echvi_3929 at 4704.901 kb on + strand, within Echvi_3929 at 4704.901 kb on + strand, within Echvi_3929 at 4704.974 kb on + strand, within Echvi_3929 at 4704.975 kb on - strand, within Echvi_3929 at 4704.976 kb on + strand, within Echvi_3929 at 4704.976 kb on + strand, within Echvi_3929 at 4704.985 kb on - strand, within Echvi_3929 at 4705.035 kb on + strand at 4705.036 kb on - strand at 4705.083 kb on + strand at 4705.084 kb on - strand at 4705.087 kb on + strand at 4705.088 kb on - strand at 4705.088 kb on - strand at 4705.090 kb on + strand at 4705.090 kb on + strand at 4705.091 kb on - strand at 4705.113 kb on - strand at 4705.135 kb on - strand at 4705.156 kb on - strand at 4705.359 kb on + strand, within Echvi_3930 at 4705.359 kb on + strand, within Echvi_3930 at 4705.359 kb on + strand, within Echvi_3930 at 4705.359 kb on + strand, within Echvi_3930 at 4705.359 kb on + strand, within Echvi_3930 at 4705.359 kb on + strand, within Echvi_3930 at 4705.359 kb on + strand, within Echvi_3930 at 4705.359 kb on + strand, within Echvi_3930 at 4705.359 kb on + strand, within Echvi_3930 at 4705.360 kb on - strand, within Echvi_3930 at 4705.360 kb on - strand, within Echvi_3930 at 4705.360 kb on - strand, within Echvi_3930 at 4705.360 kb on - strand, within Echvi_3930 at 4705.360 kb on - strand, within Echvi_3930 at 4705.360 kb on - strand, within Echvi_3930 at 4705.360 kb on - strand, within Echvi_3930 at 4705.360 kb on - strand, within Echvi_3930 at 4705.360 kb on - strand, within Echvi_3930 at 4705.438 kb on + strand, within Echvi_3930 at 4705.438 kb on + strand, within Echvi_3930 at 4705.438 kb on + strand, within Echvi_3930 at 4705.438 kb on + strand, within Echvi_3930 at 4705.438 kb on + strand, within Echvi_3930 at 4705.439 kb on - strand, within Echvi_3930 at 4705.439 kb on - strand, within Echvi_3930 at 4705.505 kb on + strand, within Echvi_3930 at 4705.525 kb on + strand, within Echvi_3930 at 4705.525 kb on + strand, within Echvi_3930 at 4705.525 kb on + strand, within Echvi_3930 at 4705.525 kb on + strand, within Echvi_3930 at 4705.525 kb on + strand, within Echvi_3930 at 4705.526 kb on - strand, within Echvi_3930 at 4705.526 kb on - strand, within Echvi_3930 at 4705.526 kb on - strand, within Echvi_3930 at 4705.526 kb on - strand, within Echvi_3930 at 4705.529 kb on + strand, within Echvi_3930 at 4705.529 kb on + strand, within Echvi_3930 at 4705.529 kb on + strand, within Echvi_3930 at 4705.530 kb on - strand, within Echvi_3930 at 4705.530 kb on - strand, within Echvi_3930 at 4705.685 kb on + strand, within Echvi_3930 at 4705.685 kb on + strand, within Echvi_3930 at 4705.686 kb on - strand, within Echvi_3930 at 4705.689 kb on - strand, within Echvi_3930 at 4705.689 kb on - strand, within Echvi_3930 at 4705.689 kb on - strand, within Echvi_3930 at 4705.689 kb on - strand, within Echvi_3930 at 4705.689 kb on - strand, within Echvi_3930 at 4705.691 kb on - strand, within Echvi_3930 at 4705.691 kb on - strand, within Echvi_3930 at 4705.717 kb on + strand, within Echvi_3930 at 4705.718 kb on - strand, within Echvi_3930 at 4705.793 kb on + strand, within Echvi_3930 at 4705.793 kb on + strand, within Echvi_3930 at 4705.795 kb on + strand, within Echvi_3930 at 4705.796 kb on - strand, within Echvi_3930 at 4705.796 kb on - strand, within Echvi_3930 at 4705.876 kb on + strand, within Echvi_3930 at 4705.961 kb on - strand, within Echvi_3930 at 4705.993 kb on + strand, within Echvi_3930 at 4705.993 kb on + strand, within Echvi_3930 at 4706.041 kb on + strand, within Echvi_3930 at 4706.042 kb on - strand, within Echvi_3930 at 4706.059 kb on + strand, within Echvi_3930 at 4706.059 kb on + strand, within Echvi_3930 at 4706.060 kb on - strand, within Echvi_3930 at 4706.060 kb on - strand, within Echvi_3930 at 4706.060 kb on - strand, within Echvi_3930 at 4706.060 kb on - strand, within Echvi_3930 at 4706.060 kb on - strand, within Echvi_3930 at 4706.060 kb on - strand, within Echvi_3930 at 4706.062 kb on + strand, within Echvi_3930 at 4706.062 kb on + strand, within Echvi_3930 at 4706.062 kb on + strand, within Echvi_3930 at 4706.062 kb on + strand, within Echvi_3930 at 4706.062 kb on + strand, within Echvi_3930 at 4706.062 kb on + strand, within Echvi_3930 at 4706.062 kb on + strand, within Echvi_3930 at 4706.063 kb on - strand, within Echvi_3930 at 4706.063 kb on - strand, within Echvi_3930
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.05 mg/ml remove 4,703,614 + +0.5 4,703,615 - -0.5 4,703,615 - -1.0 4,703,627 + -0.2 4,703,639 - +0.8 4,703,762 - Echvi_3928 0.18 +0.1 4,703,776 + Echvi_3928 0.19 -0.0 4,703,972 + Echvi_3928 0.45 -0.3 4,703,972 + Echvi_3928 0.45 -1.2 4,704,042 + Echvi_3928 0.55 +0.4 4,704,069 + Echvi_3928 0.58 -0.1 4,704,069 + Echvi_3928 0.58 -0.4 4,704,069 + Echvi_3928 0.58 +0.2 4,704,069 + Echvi_3928 0.58 +0.5 4,704,070 - Echvi_3928 0.58 -0.6 4,704,070 - Echvi_3928 0.58 -0.1 4,704,292 + Echvi_3928 0.87 -0.6 4,704,340 - +0.4 4,704,340 - -0.3 4,704,379 + -1.0 4,704,380 - +0.1 4,704,384 + -0.2 4,704,454 + +0.2 4,704,455 - -1.3 4,704,455 - -0.7 4,704,473 + +0.5 4,704,474 - +0.8 4,704,477 - -0.2 4,704,494 - -1.2 4,704,494 - +1.0 4,704,554 + Echvi_3929 0.12 -0.6 4,704,557 + Echvi_3929 0.13 +0.4 4,704,558 - Echvi_3929 0.13 -0.9 4,704,568 + Echvi_3929 0.15 -1.9 4,704,568 + Echvi_3929 0.15 -0.1 4,704,569 - Echvi_3929 0.15 -0.6 4,704,615 - Echvi_3929 0.23 -0.5 4,704,615 - Echvi_3929 0.23 +0.5 4,704,666 - Echvi_3929 0.32 +0.0 4,704,667 + Echvi_3929 0.32 -0.0 4,704,667 + Echvi_3929 0.32 -2.5 4,704,667 + Echvi_3929 0.32 -0.8 4,704,667 + Echvi_3929 0.32 -0.0 4,704,667 + Echvi_3929 0.32 -0.1 4,704,667 + Echvi_3929 0.32 +0.4 4,704,667 + Echvi_3929 0.32 -0.2 4,704,668 - Echvi_3929 0.32 +0.1 4,704,668 - Echvi_3929 0.32 -0.6 4,704,668 - Echvi_3929 0.32 -0.6 4,704,668 - Echvi_3929 0.32 -0.0 4,704,668 - Echvi_3929 0.32 -0.9 4,704,893 + Echvi_3929 0.71 +1.1 4,704,897 + Echvi_3929 0.71 -0.7 4,704,901 + Echvi_3929 0.72 +0.4 4,704,901 + Echvi_3929 0.72 -0.6 4,704,974 + Echvi_3929 0.85 +1.6 4,704,975 - Echvi_3929 0.85 -0.6 4,704,976 + Echvi_3929 0.85 -0.5 4,704,976 + Echvi_3929 0.85 -1.2 4,704,985 - Echvi_3929 0.86 -2.3 4,705,035 + +0.8 4,705,036 - -0.9 4,705,083 + +0.2 4,705,084 - +0.1 4,705,087 + -2.4 4,705,088 - +0.9 4,705,088 - -1.3 4,705,090 + +0.2 4,705,090 + +0.4 4,705,091 - +0.2 4,705,113 - +0.1 4,705,135 - +0.0 4,705,156 - -1.4 4,705,359 + Echvi_3930 0.14 +0.5 4,705,359 + Echvi_3930 0.14 -0.6 4,705,359 + Echvi_3930 0.14 -0.1 4,705,359 + Echvi_3930 0.14 +0.2 4,705,359 + Echvi_3930 0.14 -0.7 4,705,359 + Echvi_3930 0.14 +0.8 4,705,359 + Echvi_3930 0.14 -0.3 4,705,359 + Echvi_3930 0.14 +0.1 4,705,359 + Echvi_3930 0.14 -0.2 4,705,360 - Echvi_3930 0.14 +1.9 4,705,360 - Echvi_3930 0.14 +0.5 4,705,360 - Echvi_3930 0.14 +0.9 4,705,360 - Echvi_3930 0.14 -1.1 4,705,360 - Echvi_3930 0.14 -0.3 4,705,360 - Echvi_3930 0.14 -1.0 4,705,360 - Echvi_3930 0.14 -0.9 4,705,360 - Echvi_3930 0.14 -2.8 4,705,360 - Echvi_3930 0.14 -1.6 4,705,438 + Echvi_3930 0.20 -0.5 4,705,438 + Echvi_3930 0.20 -0.6 4,705,438 + Echvi_3930 0.20 -0.4 4,705,438 + Echvi_3930 0.20 +0.3 4,705,438 + Echvi_3930 0.20 +0.5 4,705,439 - Echvi_3930 0.20 -1.6 4,705,439 - Echvi_3930 0.20 +0.9 4,705,505 + Echvi_3930 0.24 -1.2 4,705,525 + Echvi_3930 0.26 +0.3 4,705,525 + Echvi_3930 0.26 +0.2 4,705,525 + Echvi_3930 0.26 +0.8 4,705,525 + Echvi_3930 0.26 -0.5 4,705,525 + Echvi_3930 0.26 -1.0 4,705,526 - Echvi_3930 0.26 +2.4 4,705,526 - Echvi_3930 0.26 -0.2 4,705,526 - Echvi_3930 0.26 +0.7 4,705,526 - Echvi_3930 0.26 -0.1 4,705,529 + Echvi_3930 0.26 +0.6 4,705,529 + Echvi_3930 0.26 +0.4 4,705,529 + Echvi_3930 0.26 -1.7 4,705,530 - Echvi_3930 0.26 +0.8 4,705,530 - Echvi_3930 0.26 -1.0 4,705,685 + Echvi_3930 0.37 -0.2 4,705,685 + Echvi_3930 0.37 +1.2 4,705,686 - Echvi_3930 0.37 -0.2 4,705,689 - Echvi_3930 0.37 -1.6 4,705,689 - Echvi_3930 0.37 +0.5 4,705,689 - Echvi_3930 0.37 -1.6 4,705,689 - Echvi_3930 0.37 +0.0 4,705,689 - Echvi_3930 0.37 +0.1 4,705,691 - Echvi_3930 0.37 -1.0 4,705,691 - Echvi_3930 0.37 -0.1 4,705,717 + Echvi_3930 0.39 -0.1 4,705,718 - Echvi_3930 0.39 +0.1 4,705,793 + Echvi_3930 0.44 -0.9 4,705,793 + Echvi_3930 0.44 +0.3 4,705,795 + Echvi_3930 0.44 -1.0 4,705,796 - Echvi_3930 0.44 +0.7 4,705,796 - Echvi_3930 0.44 -1.5 4,705,876 + Echvi_3930 0.50 +0.4 4,705,961 - Echvi_3930 0.55 -1.9 4,705,993 + Echvi_3930 0.58 +0.2 4,705,993 + Echvi_3930 0.58 +0.2 4,706,041 + Echvi_3930 0.61 -0.1 4,706,042 - Echvi_3930 0.61 -0.2 4,706,059 + Echvi_3930 0.62 -2.9 4,706,059 + Echvi_3930 0.62 +0.5 4,706,060 - Echvi_3930 0.62 +1.8 4,706,060 - Echvi_3930 0.62 -0.6 4,706,060 - Echvi_3930 0.62 -0.0 4,706,060 - Echvi_3930 0.62 -0.7 4,706,060 - Echvi_3930 0.62 -0.6 4,706,060 - Echvi_3930 0.62 -0.7 4,706,062 + Echvi_3930 0.62 +0.2 4,706,062 + Echvi_3930 0.62 +0.5 4,706,062 + Echvi_3930 0.62 +0.5 4,706,062 + Echvi_3930 0.62 +0.1 4,706,062 + Echvi_3930 0.62 +1.0 4,706,062 + Echvi_3930 0.62 +0.9 4,706,062 + Echvi_3930 0.62 -1.0 4,706,063 - Echvi_3930 0.62 +1.0 4,706,063 - Echvi_3930 0.62 -0.3
Or see this region's nucleotide sequence