Experiment: m.b. Thallium(I) acetate 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2672 and Echvi_2673 are separated by 44 nucleotides Echvi_2673 and Echvi_2674 are separated by 110 nucleotides
Echvi_2672: Echvi_2672 - Beta-xylosidase, at 3,173,473 to 3,174,843
_2672
Echvi_2673: Echvi_2673 - Beta-xylosidase, at 3,174,888 to 3,176,630
_2673
Echvi_2674: Echvi_2674 - Esterase/lipase, at 3,176,741 to 3,177,679
_2674
Position (kb)
3174
3175
3176
3177 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3173.907 kb on + strand, within Echvi_2672 at 3173.908 kb on - strand, within Echvi_2672 at 3173.908 kb on - strand, within Echvi_2672 at 3173.908 kb on - strand, within Echvi_2672 at 3173.937 kb on + strand, within Echvi_2672 at 3173.959 kb on + strand, within Echvi_2672 at 3173.959 kb on + strand, within Echvi_2672 at 3173.960 kb on - strand, within Echvi_2672 at 3173.960 kb on - strand, within Echvi_2672 at 3173.986 kb on + strand, within Echvi_2672 at 3173.986 kb on + strand, within Echvi_2672 at 3173.989 kb on + strand, within Echvi_2672 at 3173.989 kb on + strand, within Echvi_2672 at 3173.989 kb on + strand, within Echvi_2672 at 3173.990 kb on - strand, within Echvi_2672 at 3174.033 kb on - strand, within Echvi_2672 at 3174.053 kb on + strand, within Echvi_2672 at 3174.072 kb on + strand, within Echvi_2672 at 3174.128 kb on - strand, within Echvi_2672 at 3174.146 kb on - strand, within Echvi_2672 at 3174.149 kb on - strand, within Echvi_2672 at 3174.184 kb on - strand, within Echvi_2672 at 3174.211 kb on - strand, within Echvi_2672 at 3174.211 kb on - strand, within Echvi_2672 at 3174.304 kb on + strand, within Echvi_2672 at 3174.304 kb on + strand, within Echvi_2672 at 3174.456 kb on + strand, within Echvi_2672 at 3174.529 kb on + strand, within Echvi_2672 at 3174.529 kb on + strand, within Echvi_2672 at 3174.654 kb on - strand, within Echvi_2672 at 3174.747 kb on + strand at 3174.748 kb on - strand at 3174.781 kb on - strand at 3174.785 kb on - strand at 3174.809 kb on + strand at 3174.809 kb on + strand at 3174.810 kb on - strand at 3174.815 kb on - strand at 3174.875 kb on + strand at 3174.876 kb on - strand at 3174.911 kb on - strand at 3174.986 kb on + strand at 3175.000 kb on - strand at 3175.000 kb on - strand at 3175.018 kb on + strand at 3175.018 kb on + strand at 3175.019 kb on - strand at 3175.113 kb on + strand, within Echvi_2673 at 3175.113 kb on + strand, within Echvi_2673 at 3175.113 kb on + strand, within Echvi_2673 at 3175.113 kb on + strand, within Echvi_2673 at 3175.116 kb on + strand, within Echvi_2673 at 3175.116 kb on + strand, within Echvi_2673 at 3175.117 kb on - strand, within Echvi_2673 at 3175.117 kb on - strand, within Echvi_2673 at 3175.117 kb on - strand, within Echvi_2673 at 3175.117 kb on - strand, within Echvi_2673 at 3175.118 kb on + strand, within Echvi_2673 at 3175.118 kb on + strand, within Echvi_2673 at 3175.119 kb on - strand, within Echvi_2673 at 3175.260 kb on + strand, within Echvi_2673 at 3175.260 kb on + strand, within Echvi_2673 at 3175.260 kb on + strand, within Echvi_2673 at 3175.260 kb on + strand, within Echvi_2673 at 3175.261 kb on - strand, within Echvi_2673 at 3175.261 kb on - strand, within Echvi_2673 at 3175.278 kb on + strand, within Echvi_2673 at 3175.278 kb on + strand, within Echvi_2673 at 3175.278 kb on + strand, within Echvi_2673 at 3175.278 kb on + strand, within Echvi_2673 at 3175.279 kb on - strand, within Echvi_2673 at 3175.279 kb on - strand, within Echvi_2673 at 3175.279 kb on - strand, within Echvi_2673 at 3175.302 kb on + strand, within Echvi_2673 at 3175.340 kb on + strand, within Echvi_2673 at 3175.340 kb on + strand, within Echvi_2673 at 3175.406 kb on + strand, within Echvi_2673 at 3175.446 kb on + strand, within Echvi_2673 at 3175.447 kb on - strand, within Echvi_2673 at 3175.488 kb on + strand, within Echvi_2673 at 3175.488 kb on + strand, within Echvi_2673 at 3175.489 kb on - strand, within Echvi_2673 at 3175.489 kb on - strand, within Echvi_2673 at 3175.489 kb on - strand, within Echvi_2673 at 3175.522 kb on - strand, within Echvi_2673 at 3175.554 kb on - strand, within Echvi_2673 at 3175.645 kb on - strand, within Echvi_2673 at 3175.647 kb on + strand, within Echvi_2673 at 3175.648 kb on - strand, within Echvi_2673 at 3175.728 kb on - strand, within Echvi_2673 at 3175.764 kb on + strand, within Echvi_2673 at 3175.765 kb on - strand, within Echvi_2673 at 3175.765 kb on - strand, within Echvi_2673 at 3175.839 kb on + strand, within Echvi_2673 at 3175.839 kb on + strand, within Echvi_2673 at 3175.861 kb on + strand, within Echvi_2673 at 3175.907 kb on + strand, within Echvi_2673 at 3175.908 kb on - strand, within Echvi_2673 at 3175.978 kb on + strand, within Echvi_2673 at 3176.067 kb on - strand, within Echvi_2673 at 3176.080 kb on - strand, within Echvi_2673 at 3176.118 kb on - strand, within Echvi_2673 at 3176.123 kb on + strand, within Echvi_2673 at 3176.123 kb on + strand, within Echvi_2673 at 3176.124 kb on - strand, within Echvi_2673 at 3176.177 kb on + strand, within Echvi_2673 at 3176.178 kb on - strand, within Echvi_2673 at 3176.178 kb on - strand, within Echvi_2673 at 3176.244 kb on + strand, within Echvi_2673 at 3176.245 kb on - strand, within Echvi_2673 at 3176.245 kb on - strand, within Echvi_2673 at 3176.341 kb on - strand, within Echvi_2673 at 3176.343 kb on + strand, within Echvi_2673 at 3176.344 kb on - strand, within Echvi_2673 at 3176.344 kb on - strand, within Echvi_2673 at 3176.589 kb on + strand at 3176.589 kb on + strand at 3176.590 kb on - strand at 3176.590 kb on - strand at 3176.649 kb on - strand at 3176.679 kb on - strand at 3176.696 kb on - strand at 3176.696 kb on - strand at 3176.700 kb on + strand at 3176.700 kb on + strand at 3176.701 kb on - strand at 3176.701 kb on - strand at 3176.710 kb on - strand at 3176.710 kb on - strand at 3176.725 kb on - strand at 3176.725 kb on - strand at 3176.747 kb on + strand at 3176.748 kb on - strand at 3176.748 kb on - strand at 3176.752 kb on - strand at 3176.780 kb on - strand at 3176.834 kb on + strand at 3177.120 kb on - strand, within Echvi_2674 at 3177.193 kb on + strand, within Echvi_2674 at 3177.209 kb on - strand, within Echvi_2674 at 3177.272 kb on + strand, within Echvi_2674 at 3177.272 kb on + strand, within Echvi_2674 at 3177.359 kb on - strand, within Echvi_2674 at 3177.376 kb on + strand, within Echvi_2674 at 3177.377 kb on - strand, within Echvi_2674 at 3177.416 kb on + strand, within Echvi_2674 at 3177.435 kb on + strand, within Echvi_2674 at 3177.436 kb on - strand, within Echvi_2674 at 3177.436 kb on - strand, within Echvi_2674 at 3177.436 kb on - strand, within Echvi_2674 at 3177.471 kb on + strand, within Echvi_2674 at 3177.471 kb on + strand, within Echvi_2674 at 3177.538 kb on + strand, within Echvi_2674 at 3177.539 kb on - strand, within Echvi_2674 at 3177.539 kb on - strand, within Echvi_2674 at 3177.560 kb on + strand, within Echvi_2674
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.05 mg/ml remove 3,173,907 + Echvi_2672 0.32 +0.5 3,173,908 - Echvi_2672 0.32 -0.0 3,173,908 - Echvi_2672 0.32 +0.3 3,173,908 - Echvi_2672 0.32 -0.5 3,173,937 + Echvi_2672 0.34 +1.6 3,173,959 + Echvi_2672 0.35 +0.6 3,173,959 + Echvi_2672 0.35 -1.8 3,173,960 - Echvi_2672 0.36 +0.1 3,173,960 - Echvi_2672 0.36 -0.7 3,173,986 + Echvi_2672 0.37 -1.2 3,173,986 + Echvi_2672 0.37 +0.7 3,173,989 + Echvi_2672 0.38 +1.0 3,173,989 + Echvi_2672 0.38 +0.5 3,173,989 + Echvi_2672 0.38 +1.6 3,173,990 - Echvi_2672 0.38 -0.3 3,174,033 - Echvi_2672 0.41 -0.2 3,174,053 + Echvi_2672 0.42 +0.0 3,174,072 + Echvi_2672 0.44 -0.2 3,174,128 - Echvi_2672 0.48 +0.0 3,174,146 - Echvi_2672 0.49 -0.7 3,174,149 - Echvi_2672 0.49 -1.0 3,174,184 - Echvi_2672 0.52 -0.3 3,174,211 - Echvi_2672 0.54 -0.2 3,174,211 - Echvi_2672 0.54 -0.9 3,174,304 + Echvi_2672 0.61 -0.2 3,174,304 + Echvi_2672 0.61 +0.5 3,174,456 + Echvi_2672 0.72 -0.7 3,174,529 + Echvi_2672 0.77 +1.0 3,174,529 + Echvi_2672 0.77 +0.2 3,174,654 - Echvi_2672 0.86 -1.6 3,174,747 + -0.8 3,174,748 - -0.6 3,174,781 - +1.2 3,174,785 - +0.4 3,174,809 + +0.2 3,174,809 + -0.6 3,174,810 - -2.2 3,174,815 - -2.5 3,174,875 + -0.3 3,174,876 - -0.3 3,174,911 - +0.1 3,174,986 + +1.4 3,175,000 - -0.3 3,175,000 - -0.6 3,175,018 + -1.0 3,175,018 + +0.1 3,175,019 - -0.1 3,175,113 + Echvi_2673 0.13 -0.4 3,175,113 + Echvi_2673 0.13 -0.2 3,175,113 + Echvi_2673 0.13 +0.7 3,175,113 + Echvi_2673 0.13 -1.0 3,175,116 + Echvi_2673 0.13 -0.0 3,175,116 + Echvi_2673 0.13 +1.4 3,175,117 - Echvi_2673 0.13 -0.5 3,175,117 - Echvi_2673 0.13 -0.2 3,175,117 - Echvi_2673 0.13 +0.0 3,175,117 - Echvi_2673 0.13 +0.1 3,175,118 + Echvi_2673 0.13 +0.4 3,175,118 + Echvi_2673 0.13 -0.1 3,175,119 - Echvi_2673 0.13 -0.3 3,175,260 + Echvi_2673 0.21 +0.8 3,175,260 + Echvi_2673 0.21 +0.8 3,175,260 + Echvi_2673 0.21 +0.0 3,175,260 + Echvi_2673 0.21 +0.1 3,175,261 - Echvi_2673 0.21 -1.1 3,175,261 - Echvi_2673 0.21 -0.5 3,175,278 + Echvi_2673 0.22 -0.8 3,175,278 + Echvi_2673 0.22 -0.9 3,175,278 + Echvi_2673 0.22 +1.2 3,175,278 + Echvi_2673 0.22 +0.4 3,175,279 - Echvi_2673 0.22 +0.4 3,175,279 - Echvi_2673 0.22 -0.9 3,175,279 - Echvi_2673 0.22 +0.1 3,175,302 + Echvi_2673 0.24 -0.2 3,175,340 + Echvi_2673 0.26 +1.0 3,175,340 + Echvi_2673 0.26 +0.7 3,175,406 + Echvi_2673 0.30 -0.9 3,175,446 + Echvi_2673 0.32 +0.3 3,175,447 - Echvi_2673 0.32 +0.1 3,175,488 + Echvi_2673 0.34 -0.2 3,175,488 + Echvi_2673 0.34 -1.1 3,175,489 - Echvi_2673 0.34 +0.2 3,175,489 - Echvi_2673 0.34 +0.3 3,175,489 - Echvi_2673 0.34 -0.8 3,175,522 - Echvi_2673 0.36 +0.1 3,175,554 - Echvi_2673 0.38 -1.0 3,175,645 - Echvi_2673 0.43 +0.0 3,175,647 + Echvi_2673 0.44 -0.2 3,175,648 - Echvi_2673 0.44 -0.4 3,175,728 - Echvi_2673 0.48 -0.9 3,175,764 + Echvi_2673 0.50 +0.9 3,175,765 - Echvi_2673 0.50 +0.0 3,175,765 - Echvi_2673 0.50 +2.2 3,175,839 + Echvi_2673 0.55 +0.6 3,175,839 + Echvi_2673 0.55 +1.2 3,175,861 + Echvi_2673 0.56 +0.3 3,175,907 + Echvi_2673 0.58 -1.6 3,175,908 - Echvi_2673 0.59 -0.6 3,175,978 + Echvi_2673 0.63 +0.1 3,176,067 - Echvi_2673 0.68 +0.3 3,176,080 - Echvi_2673 0.68 +0.2 3,176,118 - Echvi_2673 0.71 -0.5 3,176,123 + Echvi_2673 0.71 -0.4 3,176,123 + Echvi_2673 0.71 +0.3 3,176,124 - Echvi_2673 0.71 +0.5 3,176,177 + Echvi_2673 0.74 +0.3 3,176,178 - Echvi_2673 0.74 +1.1 3,176,178 - Echvi_2673 0.74 -1.3 3,176,244 + Echvi_2673 0.78 -1.6 3,176,245 - Echvi_2673 0.78 -0.4 3,176,245 - Echvi_2673 0.78 +1.3 3,176,341 - Echvi_2673 0.83 -2.0 3,176,343 + Echvi_2673 0.83 +1.0 3,176,344 - Echvi_2673 0.84 -0.2 3,176,344 - Echvi_2673 0.84 +0.9 3,176,589 + -0.0 3,176,589 + +1.0 3,176,590 - +0.3 3,176,590 - -0.3 3,176,649 - +0.1 3,176,679 - +0.4 3,176,696 - +0.1 3,176,696 - -0.5 3,176,700 + -0.6 3,176,700 + -0.3 3,176,701 - +0.2 3,176,701 - +0.1 3,176,710 - -1.3 3,176,710 - -0.6 3,176,725 - +1.6 3,176,725 - -1.0 3,176,747 + +0.9 3,176,748 - +0.2 3,176,748 - -1.0 3,176,752 - -0.8 3,176,780 - +0.8 3,176,834 + -1.5 3,177,120 - Echvi_2674 0.40 -1.1 3,177,193 + Echvi_2674 0.48 -1.5 3,177,209 - Echvi_2674 0.50 +0.8 3,177,272 + Echvi_2674 0.57 +1.3 3,177,272 + Echvi_2674 0.57 -0.2 3,177,359 - Echvi_2674 0.66 +1.2 3,177,376 + Echvi_2674 0.68 -1.5 3,177,377 - Echvi_2674 0.68 -1.1 3,177,416 + Echvi_2674 0.72 -0.2 3,177,435 + Echvi_2674 0.74 -1.0 3,177,436 - Echvi_2674 0.74 -0.6 3,177,436 - Echvi_2674 0.74 -0.6 3,177,436 - Echvi_2674 0.74 -0.2 3,177,471 + Echvi_2674 0.78 -0.6 3,177,471 + Echvi_2674 0.78 +0.3 3,177,538 + Echvi_2674 0.85 -0.3 3,177,539 - Echvi_2674 0.85 +1.3 3,177,539 - Echvi_2674 0.85 +0.0 3,177,560 + Echvi_2674 0.87 -1.0
Or see this region's nucleotide sequence