Experiment: m.b. Thallium(I) acetate 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1730 and Echvi_1731 are separated by 97 nucleotides Echvi_1731 and Echvi_1732 are separated by 57 nucleotides Echvi_1732 and Echvi_1733 overlap by 4 nucleotides Echvi_1733 and Echvi_1734 are separated by 225 nucleotides
Echvi_1730: Echvi_1730 - hypothetical protein, at 2,039,515 to 2,040,273
_1730
Echvi_1731: Echvi_1731 - hypothetical protein, at 2,040,371 to 2,041,129
_1731
Echvi_1732: Echvi_1732 - hypothetical protein, at 2,041,187 to 2,041,891
_1732
Echvi_1733: Echvi_1733 - RNA polymerase sigma factor, sigma-70 family, at 2,041,888 to 2,042,418
_1733
Echvi_1734: Echvi_1734 - Cystathionine beta-lyases/cystathionine gamma-synthases, at 2,042,644 to 2,043,753
_1734
Position (kb)
2041
2042 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2040.260 kb on - strand at 2040.273 kb on + strand at 2040.285 kb on + strand at 2040.285 kb on + strand at 2040.326 kb on - strand at 2040.488 kb on - strand, within Echvi_1731 at 2040.953 kb on - strand, within Echvi_1731 at 2040.954 kb on + strand, within Echvi_1731 at 2041.124 kb on - strand at 2041.143 kb on - strand at 2041.153 kb on + strand at 2041.154 kb on - strand at 2041.154 kb on - strand at 2041.154 kb on - strand at 2041.250 kb on - strand at 2041.279 kb on - strand, within Echvi_1732 at 2041.587 kb on - strand, within Echvi_1732 at 2041.609 kb on - strand, within Echvi_1732 at 2041.609 kb on - strand, within Echvi_1732 at 2041.897 kb on + strand at 2041.909 kb on + strand at 2041.909 kb on + strand at 2041.924 kb on + strand at 2041.925 kb on - strand at 2042.003 kb on + strand, within Echvi_1733 at 2042.004 kb on - strand, within Echvi_1733 at 2042.065 kb on + strand, within Echvi_1733 at 2042.065 kb on + strand, within Echvi_1733 at 2042.074 kb on + strand, within Echvi_1733 at 2042.075 kb on - strand, within Echvi_1733 at 2042.236 kb on + strand, within Echvi_1733 at 2042.321 kb on + strand, within Echvi_1733 at 2042.321 kb on + strand, within Echvi_1733 at 2042.322 kb on - strand, within Echvi_1733 at 2042.324 kb on - strand, within Echvi_1733 at 2042.329 kb on + strand, within Echvi_1733 at 2042.334 kb on + strand, within Echvi_1733 at 2042.335 kb on - strand, within Echvi_1733 at 2042.437 kb on + strand at 2042.437 kb on + strand at 2042.438 kb on - strand at 2042.491 kb on + strand at 2042.578 kb on + strand at 2042.609 kb on - strand at 2042.611 kb on - strand at 2042.626 kb on - strand at 2042.643 kb on + strand at 2042.644 kb on - strand at 2042.730 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.05 mg/ml remove 2,040,260 - -0.3 2,040,273 + -0.4 2,040,285 + +1.3 2,040,285 + -0.1 2,040,326 - -1.2 2,040,488 - Echvi_1731 0.15 +1.7 2,040,953 - Echvi_1731 0.77 -1.5 2,040,954 + Echvi_1731 0.77 +1.9 2,041,124 - +1.0 2,041,143 - +1.9 2,041,153 + +0.3 2,041,154 - +0.7 2,041,154 - -0.1 2,041,154 - -0.3 2,041,250 - +0.9 2,041,279 - Echvi_1732 0.13 +0.0 2,041,587 - Echvi_1732 0.57 +1.6 2,041,609 - Echvi_1732 0.60 +2.3 2,041,609 - Echvi_1732 0.60 -0.3 2,041,897 + +1.4 2,041,909 + +2.1 2,041,909 + +0.5 2,041,924 + -0.6 2,041,925 - -1.4 2,042,003 + Echvi_1733 0.22 +0.1 2,042,004 - Echvi_1733 0.22 +1.0 2,042,065 + Echvi_1733 0.33 +0.7 2,042,065 + Echvi_1733 0.33 -0.2 2,042,074 + Echvi_1733 0.35 +0.1 2,042,075 - Echvi_1733 0.35 -0.6 2,042,236 + Echvi_1733 0.66 +0.1 2,042,321 + Echvi_1733 0.82 +0.4 2,042,321 + Echvi_1733 0.82 -0.8 2,042,322 - Echvi_1733 0.82 +0.1 2,042,324 - Echvi_1733 0.82 +0.8 2,042,329 + Echvi_1733 0.83 -0.9 2,042,334 + Echvi_1733 0.84 +0.4 2,042,335 - Echvi_1733 0.84 -1.7 2,042,437 + -2.5 2,042,437 + -1.2 2,042,438 - -1.9 2,042,491 + -0.2 2,042,578 + -1.0 2,042,609 - +2.0 2,042,611 - +0.0 2,042,626 - -0.2 2,042,643 + -0.1 2,042,644 - -0.8 2,042,730 + -0.1
Or see this region's nucleotide sequence