Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS13960

Experiment: L-Glutamine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Glutamine (C)
2,726,883	-		ABIE40_RS13955	0.47	-0.5
2,726,970	-		ABIE40_RS13955	0.53	+2.5
2,726,970	-		ABIE40_RS13955	0.53	-0.5
2,726,970	-		ABIE40_RS13955	0.53	-1.1
2,727,104	+		ABIE40_RS13955	0.61	-0.2
2,727,194	+		ABIE40_RS13955	0.67	+0.3
2,727,195	-		ABIE40_RS13955	0.67	-0.7
2,727,200	-		ABIE40_RS13955	0.67	+1.9
2,727,495	-		ABIE40_RS13955	0.87	-0.4
2,727,502	-		ABIE40_RS13955	0.87	-2.1
2,727,503	+		ABIE40_RS13955	0.87	-1.1
2,727,503	+		ABIE40_RS13955	0.87	-0.2
2,727,503	+		ABIE40_RS13955	0.87	-0.3
2,727,503	+		ABIE40_RS13955	0.87	-0.5
2,727,503	+		ABIE40_RS13955	0.87	-0.8
2,727,503	+		ABIE40_RS13955	0.87	+0.1
2,727,503	+		ABIE40_RS13955	0.87	-0.8
2,727,504	-		ABIE40_RS13955	0.87	+0.1
2,727,504	-		ABIE40_RS13955	0.87	-0.9
2,727,504	-		ABIE40_RS13955	0.87	-0.1
2,727,504	-		ABIE40_RS13955	0.87	-1.7
2,727,504	-		ABIE40_RS13955	0.87	-2.9
2,727,504	-		ABIE40_RS13955	0.87	+0.3
2,727,506	-		ABIE40_RS13955	0.87	+1.1
2,727,506	-		ABIE40_RS13955	0.87	-0.7
2,727,508	+		ABIE40_RS13955	0.87	+0.2
2,727,508	+		ABIE40_RS13955	0.87	-1.2
2,727,508	+		ABIE40_RS13955	0.87	-0.5
2,727,508	+		ABIE40_RS13955	0.87	-1.5
2,727,508	+		ABIE40_RS13955	0.87	-0.9
2,727,508	+		ABIE40_RS13955	0.87	-0.6
2,727,508	+		ABIE40_RS13955	0.87	+1.0
2,727,509	-		ABIE40_RS13955	0.88	+0.6
2,727,509	-		ABIE40_RS13955	0.88	-0.8
2,727,509	-		ABIE40_RS13955	0.88	-0.2
2,727,509	-		ABIE40_RS13955	0.88	+0.1
2,727,509	-		ABIE40_RS13955	0.88	-0.5
2,727,596	+				-0.5
2,727,596	+				-0.1
2,727,596	+				+0.1
2,727,596	+				+0.1
2,727,596	+				-2.4
2,727,597	-				-0.1
2,727,597	-				-0.7
2,727,597	-				-1.4
2,727,597	-				-0.4
2,727,597	-				-0.5
2,727,671	-				-0.8
2,727,751	+				+0.8
2,727,751	+				-0.1
2,727,759	+				-0.3
2,727,759	+				-0.7
2,727,775	+				-1.4
2,727,775	+				-0.3
2,727,823	+		ABIE40_RS13960	0.10	-0.2
2,727,824	-		ABIE40_RS13960	0.11	+0.3
2,727,824	-		ABIE40_RS13960	0.11	+0.3
2,727,895	-		ABIE40_RS13960	0.16	-0.7
2,727,895	-		ABIE40_RS13960	0.16	-0.4
2,727,977	+		ABIE40_RS13960	0.23	+0.6
2,727,978	-		ABIE40_RS13960	0.23	-0.3
2,728,034	+		ABIE40_RS13960	0.28	-0.1
2,728,036	-		ABIE40_RS13960	0.28	-0.0
2,728,036	-		ABIE40_RS13960	0.28	+0.7
2,728,072	+		ABIE40_RS13960	0.31	+1.0
2,728,073	-		ABIE40_RS13960	0.31	-0.9
2,728,073	-		ABIE40_RS13960	0.31	-1.1
2,728,084	+		ABIE40_RS13960	0.32	+0.7
2,728,084	+		ABIE40_RS13960	0.32	-1.0
2,728,084	+		ABIE40_RS13960	0.32	-1.4
2,728,303	+		ABIE40_RS13960	0.50	-2.8
2,728,303	+		ABIE40_RS13960	0.50	-0.4
2,728,303	+		ABIE40_RS13960	0.50	-1.2
2,728,303	+		ABIE40_RS13960	0.50	-1.1
2,728,304	-		ABIE40_RS13960	0.50	+0.1
2,728,432	+		ABIE40_RS13960	0.61	-1.7
2,728,432	+		ABIE40_RS13960	0.61	-0.3
2,728,433	-		ABIE40_RS13960	0.61	-0.4
2,728,483	+		ABIE40_RS13960	0.65	-1.2
2,728,483	+		ABIE40_RS13960	0.65	-2.5
2,728,484	-		ABIE40_RS13960	0.65	-0.2
2,728,484	-		ABIE40_RS13960	0.65	-0.8
2,728,484	-		ABIE40_RS13960	0.65	+0.7
2,728,525	+		ABIE40_RS13960	0.69	-0.3
2,728,591	+		ABIE40_RS13960	0.74	+2.5
2,728,591	+		ABIE40_RS13960	0.74	-1.9
2,728,591	+		ABIE40_RS13960	0.74	+0.8
2,728,592	-		ABIE40_RS13960	0.74	+0.2
2,728,592	-		ABIE40_RS13960	0.74	-2.1
2,728,592	-		ABIE40_RS13960	0.74	-2.7
2,728,592	-		ABIE40_RS13960	0.74	-0.3
2,728,829	-				+0.5
2,728,882	+				-0.7
2,728,882	+				-1.6
2,728,882	+				-1.0
2,728,882	+				-1.7
2,728,882	+				-0.8
2,728,882	+				-1.3
2,728,883	-				+0.9
2,728,883	-				-1.4
2,728,884	+				-0.6
2,728,885	-				-3.0
2,729,001	+				-0.4
2,729,001	+				-0.1
2,729,027	+				+0.2
2,729,027	+				-0.7
2,729,027	+				-0.4
2,729,028	-				+0.3
2,729,028	-				-1.7
2,729,028	-				+1.1
2,729,028	-				+0.5
2,729,122	-		ABIE40_RS13965	0.10	-1.7
2,729,217	+		ABIE40_RS13965	0.20	+0.7
2,729,217	+		ABIE40_RS13965	0.20	-2.9
2,729,217	+		ABIE40_RS13965	0.20	+1.9
2,729,217	+		ABIE40_RS13965	0.20	-1.7
2,729,218	-		ABIE40_RS13965	0.20	-0.0
2,729,448	+		ABIE40_RS13965	0.43	+0.6
2,729,464	-		ABIE40_RS13965	0.44	+0.3
2,729,547	+		ABIE40_RS13965	0.53	-0.7
2,729,547	+		ABIE40_RS13965	0.53	+1.9
2,729,547	+		ABIE40_RS13965	0.53	-0.4
2,729,547	+		ABIE40_RS13965	0.53	-1.0
2,729,547	+		ABIE40_RS13965	0.53	+0.1
2,729,547	+		ABIE40_RS13965	0.53	-0.1
2,729,547	+		ABIE40_RS13965	0.53	-0.3
2,729,547	+		ABIE40_RS13965	0.53	-0.3
2,729,547	+		ABIE40_RS13965	0.53	+0.2
2,729,547	+		ABIE40_RS13965	0.53	-2.3
2,729,547	+		ABIE40_RS13965	0.53	+1.8
2,729,547	+		ABIE40_RS13965	0.53	+1.0
2,729,547	+		ABIE40_RS13965	0.53	-0.9
2,729,547	+		ABIE40_RS13965	0.53	-0.3
2,729,547	+		ABIE40_RS13965	0.53	-0.8
2,729,548	-		ABIE40_RS13965	0.53	-0.5
2,729,548	-		ABIE40_RS13965	0.53	-1.4
2,729,548	-		ABIE40_RS13965	0.53	+2.1
2,729,548	-		ABIE40_RS13965	0.53	+1.3
2,729,548	-		ABIE40_RS13965	0.53	+0.3
2,729,548	-		ABIE40_RS13965	0.53	-0.0
2,729,548	-		ABIE40_RS13965	0.53	-0.7
2,729,548	-		ABIE40_RS13965	0.53	-0.7
2,729,548	-		ABIE40_RS13965	0.53	+0.2
2,729,548	-		ABIE40_RS13965	0.53	+1.6
2,729,548	-		ABIE40_RS13965	0.53	-0.4
2,729,548	-		ABIE40_RS13965	0.53	-0.8
2,729,548	-		ABIE40_RS13965	0.53	-0.4
2,729,634	+		ABIE40_RS13965	0.61	-0.6
2,729,634	+		ABIE40_RS13965	0.61	+1.0
2,729,634	+		ABIE40_RS13965	0.61	+2.5
2,729,634	+		ABIE40_RS13965	0.61	-1.2
2,729,635	-		ABIE40_RS13965	0.62	-0.8
2,729,635	-		ABIE40_RS13965	0.62	+0.3
2,729,635	-		ABIE40_RS13965	0.62	-0.8
2,729,635	-		ABIE40_RS13965	0.62	+0.0
2,729,635	-		ABIE40_RS13965	0.62	+0.5
2,729,640	+		ABIE40_RS13965	0.62	+0.4
2,729,640	+		ABIE40_RS13965	0.62	+1.1
2,729,640	+		ABIE40_RS13965	0.62	+1.4
2,729,814	+		ABIE40_RS13965	0.80	-0.5
2,729,815	-		ABIE40_RS13965	0.80	+0.7
2,729,815	-		ABIE40_RS13965	0.80	+0.5
2,729,815	-		ABIE40_RS13965	0.80	+1.1
2,729,815	-		ABIE40_RS13965	0.80	+0.3
2,729,830	-		ABIE40_RS13965	0.81	-0.8
2,729,830	-		ABIE40_RS13965	0.81	+1.3
2,729,887	+		ABIE40_RS13965	0.87	-0.6
2,729,888	-		ABIE40_RS13965	0.87	-1.5