Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS15675 and ABID97_RS15680 are separated by 70 nucleotides ABID97_RS15680 and ABID97_RS15685 are separated by 140 nucleotides ABID97_RS15685 and ABID97_RS15690 overlap by 4 nucleotides ABID97_RS15690 and ABID97_RS15695 are separated by 21 nucleotides ABID97_RS15695 and ABID97_RS15700 overlap by 4 nucleotides
ABID97_RS15675: ABID97_RS15675 - phosphoribosylformylglycinamidine synthase, at 3,242,969 to 3,246,964
_RS15675
ABID97_RS15680: ABID97_RS15680 - peptidylprolyl isomerase, at 3,247,035 to 3,247,820
_RS15680
ABID97_RS15685: ABID97_RS15685 - BolA family protein, at 3,247,961 to 3,248,242
_RS15685
ABID97_RS15690: ABID97_RS15690 - septation protein A, at 3,248,239 to 3,248,781
_RS15690
ABID97_RS15695: ABID97_RS15695 - peptide-methionine (R)-S-oxide reductase MsrB, at 3,248,803 to 3,249,213
_RS15695
ABID97_RS15700: ABID97_RS15700 - protein adenylyltransferase SelO, at 3,249,210 to 3,250,691
_RS15700
Position (kb) 3247
3248
3249 Strain fitness (log2 ratio) -1
0
1 at 3247.037 kb on - strand at 3247.073 kb on - strand at 3247.177 kb on + strand, within ABID97_RS15680 at 3247.420 kb on + strand, within ABID97_RS15680 at 3247.420 kb on + strand, within ABID97_RS15680 at 3247.420 kb on + strand, within ABID97_RS15680 at 3247.421 kb on - strand, within ABID97_RS15680 at 3247.421 kb on - strand, within ABID97_RS15680 at 3248.022 kb on + strand, within ABID97_RS15685 at 3248.022 kb on + strand, within ABID97_RS15685 at 3248.022 kb on + strand, within ABID97_RS15685 at 3248.022 kb on + strand, within ABID97_RS15685 at 3248.023 kb on - strand, within ABID97_RS15685 at 3248.282 kb on + strand at 3248.282 kb on + strand at 3248.282 kb on + strand at 3248.283 kb on - strand at 3248.283 kb on - strand at 3248.283 kb on - strand at 3248.283 kb on - strand at 3248.283 kb on - strand at 3248.804 kb on + strand at 3248.804 kb on + strand at 3248.805 kb on - strand at 3249.062 kb on + strand, within ABID97_RS15695 at 3249.063 kb on - strand, within ABID97_RS15695 at 3249.089 kb on + strand, within ABID97_RS15695 at 3249.090 kb on - strand, within ABID97_RS15695
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 3,247,037 - -0.4 3,247,073 - +0.1 3,247,177 + ABID97_RS15680 0.18 +0.7 3,247,420 + ABID97_RS15680 0.49 +0.0 3,247,420 + ABID97_RS15680 0.49 +0.1 3,247,420 + ABID97_RS15680 0.49 -0.5 3,247,421 - ABID97_RS15680 0.49 +0.3 3,247,421 - ABID97_RS15680 0.49 +0.0 3,248,022 + ABID97_RS15685 0.22 +0.2 3,248,022 + ABID97_RS15685 0.22 -0.9 3,248,022 + ABID97_RS15685 0.22 -0.3 3,248,022 + ABID97_RS15685 0.22 +1.0 3,248,023 - ABID97_RS15685 0.22 +0.0 3,248,282 + +0.6 3,248,282 + +0.0 3,248,282 + +0.4 3,248,283 - +0.5 3,248,283 - +0.1 3,248,283 - -0.2 3,248,283 - +0.7 3,248,283 - +0.3 3,248,804 + -0.0 3,248,804 + -0.3 3,248,805 - -0.4 3,249,062 + ABID97_RS15695 0.63 -0.8 3,249,063 - ABID97_RS15695 0.63 -0.7 3,249,089 + ABID97_RS15695 0.70 -0.4 3,249,090 - ABID97_RS15695 0.70 -0.8
Or see this region's nucleotide sequence