Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS09065 and ABID97_RS09070 are separated by 11 nucleotides ABID97_RS09070 and ABID97_RS09075 are separated by 123 nucleotides ABID97_RS09075 and ABID97_RS09080 are separated by 113 nucleotides ABID97_RS09080 and ABID97_RS09085 are separated by 47 nucleotides
ABID97_RS09065: ABID97_RS09065 - type II and III secretion system protein family protein, at 1,904,249 to 1,905,772
_RS09065
ABID97_RS09070: ABID97_RS09070 - hypothetical protein, at 1,905,784 to 1,906,077
_RS09070
ABID97_RS09075: ABID97_RS09075 - Flp family type IVb pilin, at 1,906,201 to 1,906,416
_RS09075
ABID97_RS09080: ABID97_RS09080 - Flp family type IVb pilin, at 1,906,530 to 1,906,715
_RS09080
ABID97_RS09085: ABID97_RS09085 - pilus assembly protein TadG-related protein, at 1,906,763 to 1,907,992
_RS09085
Position (kb) 1906
1907 Strain fitness (log2 ratio) -1
0
1 at 1905.225 kb on + strand, within ABID97_RS09065 at 1905.995 kb on - strand, within ABID97_RS09070 at 1905.995 kb on - strand, within ABID97_RS09070 at 1906.159 kb on + strand at 1906.522 kb on + strand at 1906.522 kb on + strand at 1906.522 kb on + strand at 1906.522 kb on + strand at 1907.082 kb on - strand, within ABID97_RS09085 at 1907.082 kb on - strand, within ABID97_RS09085 at 1907.090 kb on - strand, within ABID97_RS09085 at 1907.117 kb on + strand, within ABID97_RS09085 at 1907.118 kb on - strand, within ABID97_RS09085 at 1907.118 kb on - strand, within ABID97_RS09085 at 1907.199 kb on - strand, within ABID97_RS09085
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 1,905,225 + ABID97_RS09065 0.64 -0.4 1,905,995 - ABID97_RS09070 0.72 +0.4 1,905,995 - ABID97_RS09070 0.72 +0.4 1,906,159 + +0.5 1,906,522 + +0.2 1,906,522 + +0.3 1,906,522 + -0.6 1,906,522 + -0.4 1,907,082 - ABID97_RS09085 0.26 +0.3 1,907,082 - ABID97_RS09085 0.26 +0.1 1,907,090 - ABID97_RS09085 0.27 +0.0 1,907,117 + ABID97_RS09085 0.29 -0.4 1,907,118 - ABID97_RS09085 0.29 +0.0 1,907,118 - ABID97_RS09085 0.29 -0.0 1,907,199 - ABID97_RS09085 0.35 -0.3
Or see this region's nucleotide sequence