Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS07815 and ABID97_RS07820 are separated by 186 nucleotides ABID97_RS07820 and ABID97_RS07825 are separated by 97 nucleotides ABID97_RS07825 and ABID97_RS07830 are separated by 151 nucleotides ABID97_RS07830 and ABID97_RS07835 are separated by 30 nucleotides
ABID97_RS07815: ABID97_RS07815 - thioredoxin-disulfide reductase, at 1,641,627 to 1,642,586
_RS07815
ABID97_RS07820: ABID97_RS07820 - Crp/Fnr family transcriptional regulator, at 1,642,773 to 1,643,447
_RS07820
ABID97_RS07825: ABID97_RS07825 - DNA translocase FtsK 4TM domain-containing protein, at 1,643,545 to 1,645,929
_RS07825
ABID97_RS07830: ABID97_RS07830 - outer membrane lipoprotein chaperone LolA, at 1,646,081 to 1,646,713
_RS07830
ABID97_RS07835: ABID97_RS07835 - replication-associated recombination protein A, at 1,646,744 to 1,648,036
_RS07835
Position (kb) 1643
1644
1645
1646 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 1642.599 kb on + strand at 1642.639 kb on + strand at 1642.647 kb on - strand at 1642.647 kb on - strand at 1642.648 kb on + strand at 1642.648 kb on + strand at 1642.648 kb on + strand at 1642.649 kb on - strand at 1642.710 kb on + strand at 1642.713 kb on + strand at 1642.714 kb on - strand at 1642.714 kb on - strand at 1642.770 kb on + strand at 1642.770 kb on + strand at 1642.770 kb on + strand at 1642.771 kb on - strand at 1642.771 kb on - strand at 1642.929 kb on + strand, within ABID97_RS07820 at 1642.929 kb on + strand, within ABID97_RS07820 at 1642.929 kb on + strand, within ABID97_RS07820 at 1642.929 kb on + strand, within ABID97_RS07820 at 1642.929 kb on + strand, within ABID97_RS07820 at 1642.930 kb on - strand, within ABID97_RS07820 at 1642.930 kb on - strand, within ABID97_RS07820 at 1642.930 kb on - strand, within ABID97_RS07820 at 1642.930 kb on - strand, within ABID97_RS07820 at 1643.016 kb on + strand, within ABID97_RS07820 at 1643.016 kb on + strand, within ABID97_RS07820 at 1643.016 kb on + strand, within ABID97_RS07820 at 1643.017 kb on - strand, within ABID97_RS07820 at 1643.148 kb on + strand, within ABID97_RS07820 at 1643.148 kb on + strand, within ABID97_RS07820 at 1643.148 kb on + strand, within ABID97_RS07820 at 1643.149 kb on - strand, within ABID97_RS07820 at 1643.149 kb on - strand, within ABID97_RS07820 at 1643.149 kb on - strand, within ABID97_RS07820 at 1643.226 kb on + strand, within ABID97_RS07820 at 1643.494 kb on + strand at 1643.495 kb on - strand at 1643.495 kb on - strand at 1643.495 kb on - strand at 1643.495 kb on - strand at 1643.552 kb on - strand at 1644.742 kb on + strand, within ABID97_RS07825 at 1645.222 kb on + strand, within ABID97_RS07825 at 1645.928 kb on - strand at 1645.958 kb on - strand at 1645.990 kb on + strand at 1645.990 kb on + strand at 1646.041 kb on + strand at 1646.042 kb on - strand at 1646.042 kb on - strand at 1646.042 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 1,642,599 + -1.4 1,642,639 + -2.7 1,642,647 - +0.6 1,642,647 - +1.4 1,642,648 + -3.2 1,642,648 + -1.8 1,642,648 + -3.6 1,642,649 - +0.4 1,642,710 + -1.7 1,642,713 + -3.1 1,642,714 - +0.4 1,642,714 - +0.5 1,642,770 + -0.6 1,642,770 + -0.7 1,642,770 + -1.0 1,642,771 - -0.3 1,642,771 - +1.0 1,642,929 + ABID97_RS07820 0.23 +0.9 1,642,929 + ABID97_RS07820 0.23 +0.3 1,642,929 + ABID97_RS07820 0.23 +0.7 1,642,929 + ABID97_RS07820 0.23 +1.3 1,642,929 + ABID97_RS07820 0.23 +1.1 1,642,930 - ABID97_RS07820 0.23 +1.5 1,642,930 - ABID97_RS07820 0.23 +1.2 1,642,930 - ABID97_RS07820 0.23 +1.7 1,642,930 - ABID97_RS07820 0.23 +0.9 1,643,016 + ABID97_RS07820 0.36 -0.4 1,643,016 + ABID97_RS07820 0.36 +1.3 1,643,016 + ABID97_RS07820 0.36 +2.1 1,643,017 - ABID97_RS07820 0.36 +0.9 1,643,148 + ABID97_RS07820 0.56 +0.6 1,643,148 + ABID97_RS07820 0.56 +2.4 1,643,148 + ABID97_RS07820 0.56 +1.3 1,643,149 - ABID97_RS07820 0.56 +0.8 1,643,149 - ABID97_RS07820 0.56 +1.4 1,643,149 - ABID97_RS07820 0.56 +1.0 1,643,226 + ABID97_RS07820 0.67 +1.2 1,643,494 + +0.8 1,643,495 - +0.9 1,643,495 - +0.4 1,643,495 - +0.5 1,643,495 - -0.7 1,643,552 - +0.8 1,644,742 + ABID97_RS07825 0.50 +0.3 1,645,222 + ABID97_RS07825 0.70 +0.0 1,645,928 - +0.2 1,645,958 - +0.4 1,645,990 + -0.1 1,645,990 + +0.3 1,646,041 + -0.1 1,646,042 - -0.2 1,646,042 - -0.0 1,646,042 - +1.6
Or see this region's nucleotide sequence