Experiment: Cobalt chloride 80 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_23560 and IAI46_23565 overlap by 4 nucleotides IAI46_23565 and IAI46_23570 are separated by 151 nucleotides IAI46_23570 and IAI46_23575 are separated by 36 nucleotides IAI46_23575 and IAI46_23580 are separated by 379 nucleotides
IAI46_23560: IAI46_23560 - hydrolase, at 5,011,408 to 5,012,388
_23560
IAI46_23565: IAI46_23565 - YheU family protein, at 5,012,385 to 5,012,618
_23565
IAI46_23570: IAI46_23570 - phosphoribulokinase, at 5,012,770 to 5,013,639
_23570
IAI46_23575: IAI46_23575 - OsmC family protein, at 5,013,676 to 5,014,083
_23575
IAI46_23580: IAI46_23580 - cAMP-activated global transcriptional regulator CRP, at 5,014,463 to 5,015,095
_23580
Position (kb) 5012
5013
5014 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 5011.792 kb on + strand, within IAI46_23560 at 5011.793 kb on - strand, within IAI46_23560 at 5011.852 kb on + strand, within IAI46_23560 at 5011.853 kb on - strand, within IAI46_23560 at 5011.938 kb on + strand, within IAI46_23560 at 5011.939 kb on - strand, within IAI46_23560 at 5011.939 kb on - strand, within IAI46_23560 at 5011.939 kb on - strand, within IAI46_23560 at 5011.963 kb on + strand, within IAI46_23560 at 5011.964 kb on - strand, within IAI46_23560 at 5011.972 kb on + strand, within IAI46_23560 at 5011.972 kb on + strand, within IAI46_23560 at 5011.973 kb on - strand, within IAI46_23560 at 5012.094 kb on + strand, within IAI46_23560 at 5012.094 kb on + strand, within IAI46_23560 at 5012.095 kb on - strand, within IAI46_23560 at 5012.131 kb on + strand, within IAI46_23560 at 5012.131 kb on + strand, within IAI46_23560 at 5012.132 kb on - strand, within IAI46_23560 at 5012.135 kb on - strand, within IAI46_23560 at 5012.214 kb on + strand, within IAI46_23560 at 5012.215 kb on - strand, within IAI46_23560 at 5012.266 kb on + strand, within IAI46_23560 at 5012.341 kb on + strand at 5012.342 kb on - strand at 5012.346 kb on + strand at 5012.347 kb on - strand at 5012.369 kb on - strand at 5012.422 kb on + strand, within IAI46_23565 at 5012.422 kb on + strand, within IAI46_23565 at 5012.423 kb on - strand, within IAI46_23565 at 5012.577 kb on - strand, within IAI46_23565 at 5012.617 kb on - strand at 5012.632 kb on + strand at 5012.632 kb on + strand at 5012.632 kb on + strand at 5012.632 kb on + strand at 5012.633 kb on - strand at 5012.633 kb on - strand at 5012.633 kb on - strand at 5012.655 kb on + strand at 5012.656 kb on - strand at 5012.723 kb on + strand at 5012.724 kb on - strand at 5012.729 kb on + strand at 5012.729 kb on + strand at 5012.730 kb on - strand at 5012.748 kb on + strand at 5012.749 kb on - strand at 5012.749 kb on - strand at 5012.763 kb on + strand at 5012.763 kb on + strand at 5012.764 kb on - strand at 5012.908 kb on + strand, within IAI46_23570 at 5012.964 kb on + strand, within IAI46_23570 at 5012.965 kb on - strand, within IAI46_23570 at 5012.965 kb on - strand, within IAI46_23570 at 5012.971 kb on + strand, within IAI46_23570 at 5012.972 kb on - strand, within IAI46_23570 at 5012.972 kb on - strand, within IAI46_23570 at 5013.059 kb on - strand, within IAI46_23570 at 5013.066 kb on + strand, within IAI46_23570 at 5013.066 kb on + strand, within IAI46_23570 at 5013.067 kb on - strand, within IAI46_23570 at 5013.067 kb on - strand, within IAI46_23570 at 5013.067 kb on - strand, within IAI46_23570 at 5013.070 kb on + strand, within IAI46_23570 at 5013.071 kb on - strand, within IAI46_23570 at 5013.088 kb on + strand, within IAI46_23570 at 5013.088 kb on + strand, within IAI46_23570 at 5013.088 kb on + strand, within IAI46_23570 at 5013.088 kb on + strand, within IAI46_23570 at 5013.088 kb on + strand, within IAI46_23570 at 5013.088 kb on + strand, within IAI46_23570 at 5013.088 kb on + strand, within IAI46_23570 at 5013.089 kb on - strand, within IAI46_23570 at 5013.089 kb on - strand, within IAI46_23570 at 5013.089 kb on - strand, within IAI46_23570 at 5013.090 kb on + strand, within IAI46_23570 at 5013.155 kb on - strand, within IAI46_23570 at 5013.155 kb on - strand, within IAI46_23570 at 5013.155 kb on - strand, within IAI46_23570 at 5013.227 kb on + strand, within IAI46_23570 at 5013.228 kb on - strand, within IAI46_23570 at 5013.230 kb on + strand, within IAI46_23570 at 5013.230 kb on + strand, within IAI46_23570 at 5013.230 kb on + strand, within IAI46_23570 at 5013.337 kb on + strand, within IAI46_23570 at 5013.337 kb on + strand, within IAI46_23570 at 5013.337 kb on + strand, within IAI46_23570 at 5013.337 kb on + strand, within IAI46_23570 at 5013.338 kb on - strand, within IAI46_23570 at 5013.346 kb on + strand, within IAI46_23570 at 5013.347 kb on - strand, within IAI46_23570 at 5013.347 kb on - strand, within IAI46_23570 at 5013.347 kb on - strand, within IAI46_23570 at 5013.347 kb on - strand, within IAI46_23570 at 5013.370 kb on - strand, within IAI46_23570 at 5013.375 kb on + strand, within IAI46_23570 at 5013.401 kb on + strand, within IAI46_23570 at 5013.528 kb on + strand, within IAI46_23570 at 5013.537 kb on + strand, within IAI46_23570 at 5013.537 kb on + strand, within IAI46_23570 at 5013.537 kb on + strand, within IAI46_23570 at 5013.538 kb on - strand, within IAI46_23570 at 5013.538 kb on - strand, within IAI46_23570 at 5013.538 kb on - strand, within IAI46_23570 at 5013.538 kb on - strand, within IAI46_23570 at 5013.543 kb on + strand, within IAI46_23570 at 5013.543 kb on + strand, within IAI46_23570 at 5013.544 kb on - strand, within IAI46_23570 at 5013.637 kb on + strand at 5013.638 kb on - strand at 5013.643 kb on - strand at 5013.654 kb on + strand at 5013.670 kb on + strand at 5013.749 kb on + strand, within IAI46_23575 at 5013.749 kb on + strand, within IAI46_23575 at 5013.750 kb on - strand, within IAI46_23575 at 5013.816 kb on + strand, within IAI46_23575 at 5013.816 kb on + strand, within IAI46_23575 at 5013.817 kb on - strand, within IAI46_23575 at 5013.990 kb on + strand, within IAI46_23575 at 5014.016 kb on - strand, within IAI46_23575 at 5014.016 kb on - strand, within IAI46_23575 at 5014.068 kb on + strand at 5014.068 kb on + strand at 5014.069 kb on - strand at 5014.069 kb on - strand at 5014.069 kb on - strand at 5014.069 kb on - strand at 5014.100 kb on - strand at 5014.157 kb on - strand at 5014.157 kb on - strand at 5014.205 kb on - strand at 5014.221 kb on + strand at 5014.294 kb on + strand at 5014.318 kb on + strand at 5014.318 kb on + strand at 5014.318 kb on + strand at 5014.318 kb on + strand at 5014.318 kb on + strand at 5014.319 kb on - strand at 5014.319 kb on - strand at 5014.321 kb on + strand at 5014.321 kb on + strand at 5014.322 kb on - strand at 5014.322 kb on - strand at 5014.322 kb on - strand at 5014.326 kb on + strand at 5014.326 kb on + strand at 5014.339 kb on + strand at 5014.339 kb on + strand at 5014.339 kb on + strand at 5014.339 kb on + strand at 5014.339 kb on + strand at 5014.341 kb on + strand at 5014.341 kb on + strand at 5014.345 kb on + strand at 5014.370 kb on + strand at 5014.370 kb on + strand at 5014.380 kb on + strand at 5014.380 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 80 uM, aerobic remove 5,011,792 + IAI46_23560 0.39 -1.5 5,011,793 - IAI46_23560 0.39 -0.0 5,011,852 + IAI46_23560 0.45 +0.4 5,011,853 - IAI46_23560 0.45 +0.3 5,011,938 + IAI46_23560 0.54 +0.0 5,011,939 - IAI46_23560 0.54 -1.5 5,011,939 - IAI46_23560 0.54 +0.2 5,011,939 - IAI46_23560 0.54 -0.5 5,011,963 + IAI46_23560 0.57 +1.3 5,011,964 - IAI46_23560 0.57 -0.6 5,011,972 + IAI46_23560 0.57 +0.1 5,011,972 + IAI46_23560 0.57 -1.0 5,011,973 - IAI46_23560 0.58 +0.1 5,012,094 + IAI46_23560 0.70 +0.4 5,012,094 + IAI46_23560 0.70 +0.8 5,012,095 - IAI46_23560 0.70 -2.2 5,012,131 + IAI46_23560 0.74 +0.3 5,012,131 + IAI46_23560 0.74 +0.2 5,012,132 - IAI46_23560 0.74 -0.5 5,012,135 - IAI46_23560 0.74 -0.6 5,012,214 + IAI46_23560 0.82 -0.4 5,012,215 - IAI46_23560 0.82 -0.3 5,012,266 + IAI46_23560 0.87 +0.2 5,012,341 + +0.4 5,012,342 - -0.4 5,012,346 + +0.2 5,012,347 - -1.5 5,012,369 - +1.3 5,012,422 + IAI46_23565 0.16 +0.0 5,012,422 + IAI46_23565 0.16 -0.1 5,012,423 - IAI46_23565 0.16 +0.6 5,012,577 - IAI46_23565 0.82 +0.7 5,012,617 - -0.2 5,012,632 + +0.4 5,012,632 + -0.4 5,012,632 + +0.4 5,012,632 + +1.6 5,012,633 - -1.8 5,012,633 - -0.0 5,012,633 - +1.0 5,012,655 + -0.1 5,012,656 - +0.3 5,012,723 + -0.3 5,012,724 - -0.6 5,012,729 + -0.7 5,012,729 + +0.1 5,012,730 - +0.0 5,012,748 + +0.6 5,012,749 - +0.1 5,012,749 - +0.3 5,012,763 + +0.1 5,012,763 + +0.9 5,012,764 - -1.2 5,012,908 + IAI46_23570 0.16 -0.0 5,012,964 + IAI46_23570 0.22 +0.8 5,012,965 - IAI46_23570 0.22 +0.2 5,012,965 - IAI46_23570 0.22 +1.4 5,012,971 + IAI46_23570 0.23 -0.6 5,012,972 - IAI46_23570 0.23 +0.6 5,012,972 - IAI46_23570 0.23 -0.9 5,013,059 - IAI46_23570 0.33 +0.2 5,013,066 + IAI46_23570 0.34 +0.0 5,013,066 + IAI46_23570 0.34 -1.3 5,013,067 - IAI46_23570 0.34 -0.4 5,013,067 - IAI46_23570 0.34 +1.4 5,013,067 - IAI46_23570 0.34 +0.8 5,013,070 + IAI46_23570 0.34 +0.4 5,013,071 - IAI46_23570 0.35 -1.7 5,013,088 + IAI46_23570 0.37 +0.8 5,013,088 + IAI46_23570 0.37 +0.8 5,013,088 + IAI46_23570 0.37 +0.6 5,013,088 + IAI46_23570 0.37 +0.5 5,013,088 + IAI46_23570 0.37 -1.6 5,013,088 + IAI46_23570 0.37 +0.3 5,013,088 + IAI46_23570 0.37 +1.2 5,013,089 - IAI46_23570 0.37 -0.2 5,013,089 - IAI46_23570 0.37 +0.1 5,013,089 - IAI46_23570 0.37 +0.6 5,013,090 + IAI46_23570 0.37 -0.6 5,013,155 - IAI46_23570 0.44 +0.1 5,013,155 - IAI46_23570 0.44 -0.7 5,013,155 - IAI46_23570 0.44 +0.5 5,013,227 + IAI46_23570 0.53 +0.3 5,013,228 - IAI46_23570 0.53 +1.2 5,013,230 + IAI46_23570 0.53 +0.3 5,013,230 + IAI46_23570 0.53 -0.2 5,013,230 + IAI46_23570 0.53 +0.1 5,013,337 + IAI46_23570 0.65 +0.8 5,013,337 + IAI46_23570 0.65 -0.0 5,013,337 + IAI46_23570 0.65 +0.2 5,013,337 + IAI46_23570 0.65 +1.6 5,013,338 - IAI46_23570 0.65 +0.2 5,013,346 + IAI46_23570 0.66 +1.2 5,013,347 - IAI46_23570 0.66 -0.2 5,013,347 - IAI46_23570 0.66 +1.8 5,013,347 - IAI46_23570 0.66 +0.1 5,013,347 - IAI46_23570 0.66 -1.8 5,013,370 - IAI46_23570 0.69 -1.9 5,013,375 + IAI46_23570 0.70 -0.4 5,013,401 + IAI46_23570 0.73 +0.9 5,013,528 + IAI46_23570 0.87 +2.6 5,013,537 + IAI46_23570 0.88 +0.9 5,013,537 + IAI46_23570 0.88 +0.8 5,013,537 + IAI46_23570 0.88 +0.3 5,013,538 - IAI46_23570 0.88 +0.8 5,013,538 - IAI46_23570 0.88 +0.2 5,013,538 - IAI46_23570 0.88 -1.2 5,013,538 - IAI46_23570 0.88 +0.0 5,013,543 + IAI46_23570 0.89 -1.1 5,013,543 + IAI46_23570 0.89 -0.0 5,013,544 - IAI46_23570 0.89 -1.7 5,013,637 + +0.8 5,013,638 - +0.4 5,013,643 - +0.7 5,013,654 + -0.5 5,013,670 + +0.4 5,013,749 + IAI46_23575 0.18 +0.4 5,013,749 + IAI46_23575 0.18 -0.4 5,013,750 - IAI46_23575 0.18 +0.4 5,013,816 + IAI46_23575 0.34 +0.8 5,013,816 + IAI46_23575 0.34 -2.5 5,013,817 - IAI46_23575 0.35 +0.0 5,013,990 + IAI46_23575 0.77 +0.3 5,014,016 - IAI46_23575 0.83 +1.2 5,014,016 - IAI46_23575 0.83 +1.1 5,014,068 + -0.0 5,014,068 + +1.1 5,014,069 - -0.0 5,014,069 - +0.9 5,014,069 - -1.6 5,014,069 - -1.0 5,014,100 - -0.3 5,014,157 - -0.2 5,014,157 - -0.6 5,014,205 - +0.6 5,014,221 + +0.9 5,014,294 + +0.2 5,014,318 + -0.1 5,014,318 + +0.8 5,014,318 + +0.1 5,014,318 + +0.7 5,014,318 + +1.0 5,014,319 - +0.1 5,014,319 - +1.4 5,014,321 + +0.6 5,014,321 + -0.3 5,014,322 - +0.3 5,014,322 - +0.3 5,014,322 - +0.8 5,014,326 + +0.4 5,014,326 + +2.6 5,014,339 + +0.7 5,014,339 + +0.8 5,014,339 + +2.6 5,014,339 + +0.6 5,014,339 + +0.6 5,014,341 + +2.8 5,014,341 + +1.3 5,014,345 + +0.7 5,014,370 + +1.3 5,014,370 + +0.5 5,014,380 + +2.1 5,014,380 + +1.7
Or see this region's nucleotide sequence