Experiment: Cobalt chloride 80 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_21060 and IAI46_21065 are separated by 15 nucleotides IAI46_21065 and IAI46_21070 are separated by 17 nucleotides IAI46_21070 and IAI46_21075 overlap by 4 nucleotides IAI46_21075 and IAI46_21080 overlap by 1 nucleotides
IAI46_21060: IAI46_21060 - aldehyde dehydrogenase, at 4,460,471 to 4,461,940
_21060
IAI46_21065: IAI46_21065 - aspartate dehydrogenase, at 4,461,956 to 4,462,750
_21065
IAI46_21070: IAI46_21070 - SDR family oxidoreductase, at 4,462,768 to 4,463,562
_21070
IAI46_21075: IAI46_21075 - alpha/beta hydrolase, at 4,463,559 to 4,464,377
_21075
IAI46_21080: IAI46_21080 - cupin domain-containing protein, at 4,464,377 to 4,464,901
_21080
Position (kb) 4462
4463
4464 Strain fitness (log2 ratio) -2
-1
0
1 at 4461.964 kb on + strand at 4462.066 kb on + strand, within IAI46_21065 at 4462.066 kb on + strand, within IAI46_21065 at 4462.067 kb on - strand, within IAI46_21065 at 4462.109 kb on - strand, within IAI46_21065 at 4462.294 kb on + strand, within IAI46_21065 at 4462.321 kb on + strand, within IAI46_21065 at 4462.333 kb on - strand, within IAI46_21065 at 4462.333 kb on - strand, within IAI46_21065 at 4462.819 kb on - strand at 4463.092 kb on - strand, within IAI46_21070 at 4463.215 kb on + strand, within IAI46_21070 at 4463.345 kb on - strand, within IAI46_21070 at 4463.594 kb on - strand at 4463.624 kb on - strand at 4463.624 kb on - strand at 4463.841 kb on + strand, within IAI46_21075 at 4463.852 kb on + strand, within IAI46_21075 at 4463.852 kb on + strand, within IAI46_21075 at 4463.852 kb on + strand, within IAI46_21075 at 4463.853 kb on - strand, within IAI46_21075 at 4463.853 kb on - strand, within IAI46_21075 at 4463.949 kb on - strand, within IAI46_21075 at 4463.950 kb on + strand, within IAI46_21075 at 4464.021 kb on + strand, within IAI46_21075 at 4464.021 kb on + strand, within IAI46_21075 at 4464.022 kb on - strand, within IAI46_21075 at 4464.417 kb on + strand at 4464.417 kb on + strand at 4464.418 kb on - strand at 4464.418 kb on - strand at 4464.498 kb on + strand, within IAI46_21080 at 4464.552 kb on + strand, within IAI46_21080 at 4464.552 kb on + strand, within IAI46_21080
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 80 uM, aerobic remove 4,461,964 + -0.1 4,462,066 + IAI46_21065 0.14 +0.5 4,462,066 + IAI46_21065 0.14 -1.2 4,462,067 - IAI46_21065 0.14 +1.4 4,462,109 - IAI46_21065 0.19 +0.6 4,462,294 + IAI46_21065 0.43 -2.1 4,462,321 + IAI46_21065 0.46 +0.3 4,462,333 - IAI46_21065 0.47 +0.4 4,462,333 - IAI46_21065 0.47 -0.1 4,462,819 - -0.6 4,463,092 - IAI46_21070 0.41 +1.1 4,463,215 + IAI46_21070 0.56 +0.3 4,463,345 - IAI46_21070 0.73 -0.0 4,463,594 - +1.7 4,463,624 - -0.1 4,463,624 - -0.7 4,463,841 + IAI46_21075 0.34 -0.8 4,463,852 + IAI46_21075 0.36 +1.2 4,463,852 + IAI46_21075 0.36 +0.5 4,463,852 + IAI46_21075 0.36 +0.5 4,463,853 - IAI46_21075 0.36 +1.2 4,463,853 - IAI46_21075 0.36 +0.1 4,463,949 - IAI46_21075 0.48 +0.0 4,463,950 + IAI46_21075 0.48 +0.1 4,464,021 + IAI46_21075 0.56 -0.1 4,464,021 + IAI46_21075 0.56 +0.3 4,464,022 - IAI46_21075 0.57 +0.6 4,464,417 + -0.9 4,464,417 + -0.0 4,464,418 - +0.5 4,464,418 - +0.0 4,464,498 + IAI46_21080 0.23 +0.6 4,464,552 + IAI46_21080 0.33 +0.0 4,464,552 + IAI46_21080 0.33 -0.9
Or see this region's nucleotide sequence