Experiment: Cobalt chloride 80 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_17525 and IAI46_17530 are separated by 50 nucleotides IAI46_17530 and IAI46_17535 are separated by 334 nucleotides IAI46_17535 and IAI46_17540 are separated by 179 nucleotides
IAI46_17525: IAI46_17525 - tyrosine transporter TyrP, at 3,684,621 to 3,685,829
_17525
IAI46_17530: IAI46_17530 - porin, at 3,685,880 to 3,686,422
_17530
IAI46_17535: IAI46_17535 - catalase, at 3,686,757 to 3,688,193
_17535
IAI46_17540: IAI46_17540 - o-succinylbenzoate--CoA ligase, at 3,688,373 to 3,689,758
_17540
Position (kb)
3686
3687
3688
3689 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3685.828 kb on - strand at 3685.878 kb on + strand at 3685.905 kb on + strand at 3685.905 kb on + strand at 3685.905 kb on + strand at 3685.906 kb on - strand at 3685.906 kb on - strand at 3685.960 kb on + strand, within IAI46_17530 at 3685.961 kb on - strand, within IAI46_17530 at 3685.961 kb on - strand, within IAI46_17530 at 3686.031 kb on + strand, within IAI46_17530 at 3686.071 kb on - strand, within IAI46_17530 at 3686.272 kb on + strand, within IAI46_17530 at 3686.272 kb on + strand, within IAI46_17530 at 3686.279 kb on + strand, within IAI46_17530 at 3686.329 kb on - strand, within IAI46_17530 at 3686.329 kb on - strand, within IAI46_17530 at 3686.329 kb on - strand, within IAI46_17530 at 3686.440 kb on - strand at 3686.460 kb on + strand at 3686.475 kb on - strand at 3686.475 kb on - strand at 3686.480 kb on + strand at 3686.480 kb on + strand at 3686.480 kb on + strand at 3686.480 kb on + strand at 3686.481 kb on - strand at 3686.494 kb on + strand at 3686.494 kb on + strand at 3686.494 kb on + strand at 3686.495 kb on - strand at 3686.618 kb on + strand at 3686.619 kb on - strand at 3686.638 kb on + strand at 3686.639 kb on - strand at 3686.639 kb on - strand at 3686.639 kb on - strand at 3686.645 kb on - strand at 3686.651 kb on - strand at 3686.651 kb on - strand at 3686.654 kb on - strand at 3686.666 kb on + strand at 3686.667 kb on - strand at 3686.697 kb on - strand at 3686.739 kb on + strand at 3686.807 kb on + strand at 3686.808 kb on - strand at 3686.808 kb on - strand at 3686.810 kb on + strand at 3686.811 kb on - strand at 3686.964 kb on - strand, within IAI46_17535 at 3686.967 kb on - strand, within IAI46_17535 at 3686.974 kb on - strand, within IAI46_17535 at 3687.102 kb on + strand, within IAI46_17535 at 3687.117 kb on - strand, within IAI46_17535 at 3687.117 kb on - strand, within IAI46_17535 at 3687.186 kb on - strand, within IAI46_17535 at 3687.286 kb on + strand, within IAI46_17535 at 3687.286 kb on + strand, within IAI46_17535 at 3687.286 kb on + strand, within IAI46_17535 at 3687.287 kb on - strand, within IAI46_17535 at 3687.319 kb on - strand, within IAI46_17535 at 3687.573 kb on + strand, within IAI46_17535 at 3687.573 kb on + strand, within IAI46_17535 at 3687.573 kb on + strand, within IAI46_17535 at 3687.573 kb on + strand, within IAI46_17535 at 3687.573 kb on + strand, within IAI46_17535 at 3687.574 kb on - strand, within IAI46_17535 at 3687.599 kb on - strand, within IAI46_17535 at 3687.666 kb on + strand, within IAI46_17535 at 3687.710 kb on - strand, within IAI46_17535 at 3687.765 kb on + strand, within IAI46_17535 at 3687.842 kb on + strand, within IAI46_17535 at 3687.843 kb on - strand, within IAI46_17535 at 3687.846 kb on + strand, within IAI46_17535 at 3687.847 kb on - strand, within IAI46_17535 at 3687.847 kb on - strand, within IAI46_17535 at 3687.901 kb on - strand, within IAI46_17535 at 3687.944 kb on + strand, within IAI46_17535 at 3687.945 kb on - strand, within IAI46_17535 at 3688.008 kb on + strand, within IAI46_17535 at 3688.008 kb on + strand, within IAI46_17535 at 3688.064 kb on + strand at 3688.064 kb on + strand at 3688.065 kb on - strand at 3688.065 kb on - strand at 3688.065 kb on - strand at 3688.065 kb on - strand at 3688.076 kb on + strand at 3688.132 kb on + strand at 3688.133 kb on - strand at 3688.168 kb on + strand at 3688.269 kb on - strand at 3688.269 kb on - strand at 3688.269 kb on - strand at 3688.375 kb on - strand at 3688.385 kb on + strand at 3688.385 kb on + strand at 3688.385 kb on + strand at 3688.386 kb on - strand at 3688.849 kb on + strand, within IAI46_17540 at 3689.092 kb on + strand, within IAI46_17540 at 3689.125 kb on + strand, within IAI46_17540 at 3689.126 kb on - strand, within IAI46_17540
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 80 uM, aerobic remove 3,685,828 - +1.9 3,685,878 + -0.7 3,685,905 + -0.7 3,685,905 + -1.5 3,685,905 + -0.4 3,685,906 - +2.2 3,685,906 - +0.1 3,685,960 + IAI46_17530 0.15 +0.3 3,685,961 - IAI46_17530 0.15 -0.4 3,685,961 - IAI46_17530 0.15 -1.9 3,686,031 + IAI46_17530 0.28 +0.4 3,686,071 - IAI46_17530 0.35 -0.4 3,686,272 + IAI46_17530 0.72 +0.5 3,686,272 + IAI46_17530 0.72 -0.4 3,686,279 + IAI46_17530 0.73 +0.8 3,686,329 - IAI46_17530 0.83 -0.2 3,686,329 - IAI46_17530 0.83 +0.2 3,686,329 - IAI46_17530 0.83 +0.9 3,686,440 - +0.7 3,686,460 + +0.2 3,686,475 - -0.1 3,686,475 - +0.8 3,686,480 + -1.2 3,686,480 + -1.7 3,686,480 + +0.0 3,686,480 + -1.8 3,686,481 - +0.7 3,686,494 + +0.2 3,686,494 + +1.1 3,686,494 + +1.4 3,686,495 - -1.2 3,686,618 + +0.3 3,686,619 - +0.3 3,686,638 + +0.1 3,686,639 - -0.7 3,686,639 - +0.3 3,686,639 - +0.6 3,686,645 - +1.1 3,686,651 - -0.5 3,686,651 - +1.3 3,686,654 - +1.3 3,686,666 + +0.2 3,686,667 - +0.1 3,686,697 - -0.1 3,686,739 + +1.8 3,686,807 + +0.8 3,686,808 - +0.2 3,686,808 - +0.5 3,686,810 + +0.1 3,686,811 - +0.9 3,686,964 - IAI46_17535 0.14 -0.7 3,686,967 - IAI46_17535 0.15 +1.2 3,686,974 - IAI46_17535 0.15 -0.8 3,687,102 + IAI46_17535 0.24 -0.0 3,687,117 - IAI46_17535 0.25 -0.5 3,687,117 - IAI46_17535 0.25 -0.2 3,687,186 - IAI46_17535 0.30 -1.2 3,687,286 + IAI46_17535 0.37 +0.9 3,687,286 + IAI46_17535 0.37 +0.4 3,687,286 + IAI46_17535 0.37 +0.5 3,687,287 - IAI46_17535 0.37 -0.1 3,687,319 - IAI46_17535 0.39 -0.7 3,687,573 + IAI46_17535 0.57 +0.0 3,687,573 + IAI46_17535 0.57 -0.4 3,687,573 + IAI46_17535 0.57 -0.3 3,687,573 + IAI46_17535 0.57 -0.5 3,687,573 + IAI46_17535 0.57 -0.6 3,687,574 - IAI46_17535 0.57 +0.0 3,687,599 - IAI46_17535 0.59 +0.2 3,687,666 + IAI46_17535 0.63 -0.5 3,687,710 - IAI46_17535 0.66 +0.2 3,687,765 + IAI46_17535 0.70 +0.1 3,687,842 + IAI46_17535 0.76 +0.0 3,687,843 - IAI46_17535 0.76 +0.3 3,687,846 + IAI46_17535 0.76 -1.3 3,687,847 - IAI46_17535 0.76 -0.9 3,687,847 - IAI46_17535 0.76 +1.1 3,687,901 - IAI46_17535 0.80 +0.8 3,687,944 + IAI46_17535 0.83 +0.2 3,687,945 - IAI46_17535 0.83 +0.9 3,688,008 + IAI46_17535 0.87 -0.9 3,688,008 + IAI46_17535 0.87 +0.3 3,688,064 + +1.7 3,688,064 + +1.5 3,688,065 - -0.7 3,688,065 - -1.9 3,688,065 - -1.5 3,688,065 - +0.6 3,688,076 + -0.3 3,688,132 + +0.3 3,688,133 - -0.9 3,688,168 + +0.6 3,688,269 - -0.8 3,688,269 - +0.3 3,688,269 - -0.1 3,688,375 - +0.9 3,688,385 + -1.0 3,688,385 + -1.9 3,688,385 + -0.1 3,688,386 - +1.0 3,688,849 + IAI46_17540 0.34 +0.2 3,689,092 + IAI46_17540 0.52 +1.8 3,689,125 + IAI46_17540 0.54 +0.5 3,689,126 - IAI46_17540 0.54 -0.4
Or see this region's nucleotide sequence