Experiment: Cobalt chloride 80 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_16975 and IAI46_16980 are separated by 39 nucleotides IAI46_16980 and IAI46_16985 overlap by 23 nucleotides IAI46_16985 and IAI46_16990 are separated by 4 nucleotides
IAI46_16975: IAI46_16975 - anion permease, at 3,557,542 to 3,559,005
_16975
IAI46_16980: IAI46_16980 - triphosphoribosyl-dephospho-CoA synthase CitG, at 3,559,045 to 3,559,971
_16980
IAI46_16985: IAI46_16985 - citrate lyase holo-[acyl-carrier protein] synthase, at 3,559,949 to 3,560,497
_16985
IAI46_16990: IAI46_16990 - citrate lyase subunit alpha, at 3,560,502 to 3,562,007
_16990
Position (kb)
3559
3560 Strain fitness (log2 ratio)
-1
0
1
2 at 3558.086 kb on - strand, within IAI46_16975 at 3558.086 kb on - strand, within IAI46_16975 at 3558.086 kb on - strand, within IAI46_16975 at 3558.144 kb on - strand, within IAI46_16975 at 3558.144 kb on - strand, within IAI46_16975 at 3558.144 kb on - strand, within IAI46_16975 at 3558.144 kb on - strand, within IAI46_16975 at 3558.144 kb on - strand, within IAI46_16975 at 3558.231 kb on - strand, within IAI46_16975 at 3558.236 kb on + strand, within IAI46_16975 at 3558.237 kb on - strand, within IAI46_16975 at 3558.315 kb on + strand, within IAI46_16975 at 3558.316 kb on - strand, within IAI46_16975 at 3558.316 kb on - strand, within IAI46_16975 at 3558.360 kb on + strand, within IAI46_16975 at 3558.541 kb on - strand, within IAI46_16975 at 3558.672 kb on + strand, within IAI46_16975 at 3558.767 kb on - strand, within IAI46_16975 at 3559.006 kb on - strand at 3559.006 kb on - strand at 3559.039 kb on + strand at 3559.039 kb on + strand at 3559.040 kb on - strand at 3559.040 kb on - strand at 3559.040 kb on - strand at 3559.196 kb on - strand, within IAI46_16980 at 3559.380 kb on - strand, within IAI46_16980 at 3559.566 kb on + strand, within IAI46_16980 at 3560.213 kb on - strand, within IAI46_16985 at 3560.343 kb on - strand, within IAI46_16985 at 3560.705 kb on + strand, within IAI46_16990 at 3560.705 kb on + strand, within IAI46_16990 at 3560.757 kb on - strand, within IAI46_16990 at 3560.929 kb on - strand, within IAI46_16990 at 3560.929 kb on - strand, within IAI46_16990
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 80 uM, aerobic remove 3,558,086 - IAI46_16975 0.37 +0.3 3,558,086 - IAI46_16975 0.37 +0.1 3,558,086 - IAI46_16975 0.37 +0.1 3,558,144 - IAI46_16975 0.41 +1.0 3,558,144 - IAI46_16975 0.41 -0.1 3,558,144 - IAI46_16975 0.41 +0.3 3,558,144 - IAI46_16975 0.41 +0.0 3,558,144 - IAI46_16975 0.41 +0.1 3,558,231 - IAI46_16975 0.47 +0.9 3,558,236 + IAI46_16975 0.47 +2.5 3,558,237 - IAI46_16975 0.47 +0.6 3,558,315 + IAI46_16975 0.53 -1.2 3,558,316 - IAI46_16975 0.53 +0.1 3,558,316 - IAI46_16975 0.53 -0.2 3,558,360 + IAI46_16975 0.56 -0.7 3,558,541 - IAI46_16975 0.68 +0.0 3,558,672 + IAI46_16975 0.77 +1.2 3,558,767 - IAI46_16975 0.84 +0.5 3,559,006 - +1.5 3,559,006 - +1.4 3,559,039 + +2.0 3,559,039 + +0.6 3,559,040 - -0.4 3,559,040 - -0.1 3,559,040 - -0.8 3,559,196 - IAI46_16980 0.16 +0.3 3,559,380 - IAI46_16980 0.36 +0.3 3,559,566 + IAI46_16980 0.56 +0.1 3,560,213 - IAI46_16985 0.48 -0.5 3,560,343 - IAI46_16985 0.72 +1.3 3,560,705 + IAI46_16990 0.13 +0.5 3,560,705 + IAI46_16990 0.13 +0.4 3,560,757 - IAI46_16990 0.17 +1.5 3,560,929 - IAI46_16990 0.28 +1.4 3,560,929 - IAI46_16990 0.28 +0.0
Or see this region's nucleotide sequence