Experiment: Cobalt chloride 80 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_15635 and IAI46_15640 overlap by 4 nucleotides IAI46_15640 and IAI46_15645 overlap by 11 nucleotides IAI46_15645 and IAI46_15650 overlap by 4 nucleotides
IAI46_15635: IAI46_15635 - ABC transporter ATP-binding protein, at 3,280,571 to 3,281,242
_15635
IAI46_15640: IAI46_15640 - ABC transporter ATP-binding protein, at 3,281,239 to 3,282,075
_15640
IAI46_15645: IAI46_15645 - ABC transporter permease, at 3,282,065 to 3,282,934
_15645
IAI46_15650: IAI46_15650 - ABC transporter permease, at 3,282,931 to 3,283,983
_15650
Position (kb)
3282
3283 Strain fitness (log2 ratio)
-1
0
1 at 3281.394 kb on - strand, within IAI46_15640 at 3281.394 kb on - strand, within IAI46_15640 at 3281.417 kb on + strand, within IAI46_15640 at 3281.463 kb on + strand, within IAI46_15640 at 3281.463 kb on + strand, within IAI46_15640 at 3281.463 kb on + strand, within IAI46_15640 at 3281.463 kb on + strand, within IAI46_15640 at 3281.463 kb on + strand, within IAI46_15640 at 3281.464 kb on - strand, within IAI46_15640 at 3281.464 kb on - strand, within IAI46_15640 at 3281.466 kb on + strand, within IAI46_15640 at 3281.466 kb on + strand, within IAI46_15640 at 3281.466 kb on + strand, within IAI46_15640 at 3281.466 kb on + strand, within IAI46_15640 at 3281.467 kb on - strand, within IAI46_15640 at 3281.467 kb on - strand, within IAI46_15640 at 3281.467 kb on - strand, within IAI46_15640 at 3281.467 kb on - strand, within IAI46_15640 at 3281.718 kb on + strand, within IAI46_15640 at 3281.893 kb on + strand, within IAI46_15640 at 3282.063 kb on + strand at 3282.377 kb on - strand, within IAI46_15645 at 3282.572 kb on - strand, within IAI46_15645 at 3282.647 kb on + strand, within IAI46_15645 at 3282.681 kb on + strand, within IAI46_15645 at 3282.925 kb on - strand at 3282.925 kb on - strand at 3282.953 kb on - strand at 3282.953 kb on - strand at 3282.956 kb on + strand at 3283.064 kb on + strand, within IAI46_15650 at 3283.130 kb on + strand, within IAI46_15650 at 3283.131 kb on - strand, within IAI46_15650 at 3283.131 kb on - strand, within IAI46_15650 at 3283.177 kb on + strand, within IAI46_15650 at 3283.194 kb on + strand, within IAI46_15650 at 3283.195 kb on - strand, within IAI46_15650 at 3283.235 kb on + strand, within IAI46_15650 at 3283.236 kb on - strand, within IAI46_15650 at 3283.346 kb on + strand, within IAI46_15650 at 3283.347 kb on - strand, within IAI46_15650 at 3283.415 kb on + strand, within IAI46_15650 at 3283.416 kb on - strand, within IAI46_15650 at 3283.421 kb on + strand, within IAI46_15650 at 3283.422 kb on - strand, within IAI46_15650 at 3283.422 kb on - strand, within IAI46_15650 at 3283.470 kb on - strand, within IAI46_15650 at 3283.593 kb on + strand, within IAI46_15650 at 3283.693 kb on - strand, within IAI46_15650 at 3283.793 kb on + strand, within IAI46_15650 at 3283.794 kb on - strand, within IAI46_15650 at 3283.794 kb on - strand, within IAI46_15650 at 3283.834 kb on - strand, within IAI46_15650 at 3283.834 kb on - strand, within IAI46_15650 at 3283.834 kb on - strand, within IAI46_15650 at 3283.863 kb on + strand, within IAI46_15650 at 3283.864 kb on - strand, within IAI46_15650
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 80 uM, aerobic remove 3,281,394 - IAI46_15640 0.19 +0.4 3,281,394 - IAI46_15640 0.19 -0.3 3,281,417 + IAI46_15640 0.21 -0.9 3,281,463 + IAI46_15640 0.27 -0.1 3,281,463 + IAI46_15640 0.27 -0.9 3,281,463 + IAI46_15640 0.27 -0.3 3,281,463 + IAI46_15640 0.27 -0.3 3,281,463 + IAI46_15640 0.27 +0.3 3,281,464 - IAI46_15640 0.27 +1.3 3,281,464 - IAI46_15640 0.27 -1.3 3,281,466 + IAI46_15640 0.27 +0.4 3,281,466 + IAI46_15640 0.27 +0.4 3,281,466 + IAI46_15640 0.27 +0.7 3,281,466 + IAI46_15640 0.27 +0.2 3,281,467 - IAI46_15640 0.27 +0.6 3,281,467 - IAI46_15640 0.27 +0.6 3,281,467 - IAI46_15640 0.27 -1.5 3,281,467 - IAI46_15640 0.27 +0.7 3,281,718 + IAI46_15640 0.57 -0.3 3,281,893 + IAI46_15640 0.78 -0.8 3,282,063 + -0.5 3,282,377 - IAI46_15645 0.36 -1.5 3,282,572 - IAI46_15645 0.58 -0.6 3,282,647 + IAI46_15645 0.67 +0.2 3,282,681 + IAI46_15645 0.71 -0.9 3,282,925 - +0.3 3,282,925 - -1.0 3,282,953 - +1.2 3,282,953 - -0.3 3,282,956 + +0.5 3,283,064 + IAI46_15650 0.13 -1.0 3,283,130 + IAI46_15650 0.19 +1.4 3,283,131 - IAI46_15650 0.19 -1.0 3,283,131 - IAI46_15650 0.19 +0.8 3,283,177 + IAI46_15650 0.23 +0.2 3,283,194 + IAI46_15650 0.25 -0.1 3,283,195 - IAI46_15650 0.25 +0.1 3,283,235 + IAI46_15650 0.29 -0.7 3,283,236 - IAI46_15650 0.29 +0.6 3,283,346 + IAI46_15650 0.39 -0.7 3,283,347 - IAI46_15650 0.40 -0.6 3,283,415 + IAI46_15650 0.46 -0.6 3,283,416 - IAI46_15650 0.46 -0.6 3,283,421 + IAI46_15650 0.47 +0.3 3,283,422 - IAI46_15650 0.47 -0.6 3,283,422 - IAI46_15650 0.47 -0.9 3,283,470 - IAI46_15650 0.51 -0.7 3,283,593 + IAI46_15650 0.63 +0.4 3,283,693 - IAI46_15650 0.72 +0.4 3,283,793 + IAI46_15650 0.82 +1.4 3,283,794 - IAI46_15650 0.82 -0.7 3,283,794 - IAI46_15650 0.82 -0.0 3,283,834 - IAI46_15650 0.86 +0.3 3,283,834 - IAI46_15650 0.86 -0.5 3,283,834 - IAI46_15650 0.86 +0.3 3,283,863 + IAI46_15650 0.89 -0.3 3,283,864 - IAI46_15650 0.89 -1.5
Or see this region's nucleotide sequence