Experiment: Cobalt chloride 80 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_12530 and IAI46_12535 overlap by 1 nucleotides IAI46_12535 and IAI46_12540 are separated by 87 nucleotides IAI46_12540 and IAI46_12545 are separated by 260 nucleotides IAI46_12545 and IAI46_12550 are separated by 17 nucleotides
IAI46_12530: IAI46_12530 - proton-conducting membrane transporter, at 2,663,727 to 2,665,595
_12530
IAI46_12535: IAI46_12535 - 4Fe-4S dicluster domain-containing protein, at 2,665,595 to 2,666,209
_12535
IAI46_12540: IAI46_12540 - formate hydrogenlyase regulator HycA, at 2,666,297 to 2,666,764
_12540
IAI46_12545: IAI46_12545 - hydrogenase maturation nickel metallochaperone HypA, at 2,667,025 to 2,667,369
_12545
IAI46_12550: IAI46_12550 - hydrogenase nickel incorporation protein HypB, at 2,667,387 to 2,668,181
_12550
Position (kb)
2666
2667 Strain fitness (log2 ratio)
-2
-1
0
1 at 2665.745 kb on - strand, within IAI46_12535 at 2666.108 kb on + strand, within IAI46_12535 at 2666.161 kb on + strand at 2666.174 kb on - strand at 2666.397 kb on + strand, within IAI46_12540 at 2666.409 kb on - strand, within IAI46_12540 at 2666.591 kb on + strand, within IAI46_12540 at 2666.635 kb on + strand, within IAI46_12540 at 2666.682 kb on + strand, within IAI46_12540 at 2666.756 kb on - strand at 2666.756 kb on - strand at 2666.756 kb on - strand at 2666.922 kb on + strand at 2667.062 kb on + strand, within IAI46_12545 at 2667.176 kb on + strand, within IAI46_12545 at 2667.756 kb on - strand, within IAI46_12550
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 80 uM, aerobic remove 2,665,745 - IAI46_12535 0.24 +1.5 2,666,108 + IAI46_12535 0.83 -0.7 2,666,161 + -0.8 2,666,174 - +1.0 2,666,397 + IAI46_12540 0.21 -0.8 2,666,409 - IAI46_12540 0.24 -1.3 2,666,591 + IAI46_12540 0.63 +1.3 2,666,635 + IAI46_12540 0.72 +0.1 2,666,682 + IAI46_12540 0.82 -0.4 2,666,756 - -0.6 2,666,756 - -1.3 2,666,756 - -2.3 2,666,922 + -0.1 2,667,062 + IAI46_12545 0.11 +0.7 2,667,176 + IAI46_12545 0.44 +1.3 2,667,756 - IAI46_12550 0.46 +0.0
Or see this region's nucleotide sequence