Experiment: Cobalt chloride 80 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_09090 and IAI46_09095 are separated by 480 nucleotides IAI46_09095 and IAI46_09100 are separated by 105 nucleotides IAI46_09100 and IAI46_09105 overlap by 8 nucleotides
IAI46_09090: IAI46_09090 - MFS transporter, at 1,947,708 to 1,948,946
_09090
IAI46_09095: IAI46_09095 - antibiotic biosynthesis monooxygenase, at 1,949,427 to 1,949,726
_09095
IAI46_09100: IAI46_09100 - enoyl-CoA hydratase/isomerase family protein, at 1,949,832 to 1,950,551
_09100
IAI46_09105: IAI46_09105 - MFS transporter, at 1,950,544 to 1,951,716
_09105
Position (kb) 1949
1950 Strain fitness (log2 ratio) -1
0
1
2 at 1948.427 kb on - strand, within IAI46_09090 at 1948.577 kb on + strand, within IAI46_09090 at 1948.578 kb on - strand, within IAI46_09090 at 1948.578 kb on - strand, within IAI46_09090 at 1948.578 kb on - strand, within IAI46_09090 at 1948.578 kb on - strand, within IAI46_09090 at 1948.578 kb on - strand, within IAI46_09090 at 1948.578 kb on - strand, within IAI46_09090 at 1948.578 kb on - strand, within IAI46_09090 at 1948.578 kb on - strand, within IAI46_09090 at 1948.581 kb on + strand, within IAI46_09090 at 1948.582 kb on - strand, within IAI46_09090 at 1948.582 kb on - strand, within IAI46_09090 at 1948.582 kb on - strand, within IAI46_09090 at 1948.602 kb on - strand, within IAI46_09090 at 1948.612 kb on + strand, within IAI46_09090 at 1948.694 kb on - strand, within IAI46_09090 at 1948.816 kb on + strand, within IAI46_09090 at 1948.902 kb on + strand at 1948.933 kb on + strand at 1948.933 kb on + strand at 1948.977 kb on - strand at 1949.012 kb on + strand at 1949.015 kb on + strand at 1949.015 kb on + strand at 1949.015 kb on + strand at 1949.015 kb on + strand at 1949.067 kb on - strand at 1949.067 kb on - strand at 1949.090 kb on + strand at 1949.091 kb on - strand at 1949.091 kb on - strand at 1949.218 kb on - strand at 1949.303 kb on + strand at 1949.303 kb on + strand at 1949.315 kb on + strand at 1949.341 kb on + strand at 1949.383 kb on - strand at 1949.431 kb on + strand at 1949.432 kb on - strand at 1949.504 kb on - strand, within IAI46_09095 at 1949.538 kb on + strand, within IAI46_09095 at 1949.684 kb on + strand, within IAI46_09095 at 1949.783 kb on - strand at 1949.882 kb on - strand at 1949.882 kb on - strand at 1950.094 kb on + strand, within IAI46_09100 at 1950.094 kb on + strand, within IAI46_09100 at 1950.095 kb on - strand, within IAI46_09100 at 1950.431 kb on - strand, within IAI46_09100 at 1950.629 kb on + strand at 1950.630 kb on - strand at 1950.630 kb on - strand at 1950.632 kb on + strand at 1950.633 kb on - strand at 1950.645 kb on + strand at 1950.646 kb on - strand at 1950.646 kb on - strand at 1950.647 kb on + strand at 1950.647 kb on + strand at 1950.648 kb on - strand at 1950.692 kb on + strand, within IAI46_09105 at 1950.693 kb on - strand, within IAI46_09105
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 80 uM, aerobic remove 1,948,427 - IAI46_09090 0.58 +1.5 1,948,577 + IAI46_09090 0.70 +0.8 1,948,578 - IAI46_09090 0.70 -0.7 1,948,578 - IAI46_09090 0.70 +0.4 1,948,578 - IAI46_09090 0.70 +1.1 1,948,578 - IAI46_09090 0.70 -1.5 1,948,578 - IAI46_09090 0.70 -0.1 1,948,578 - IAI46_09090 0.70 +0.4 1,948,578 - IAI46_09090 0.70 -0.8 1,948,578 - IAI46_09090 0.70 +1.1 1,948,581 + IAI46_09090 0.70 -0.1 1,948,582 - IAI46_09090 0.71 +0.4 1,948,582 - IAI46_09090 0.71 +0.4 1,948,582 - IAI46_09090 0.71 -0.2 1,948,602 - IAI46_09090 0.72 -0.5 1,948,612 + IAI46_09090 0.73 -0.3 1,948,694 - IAI46_09090 0.80 +1.0 1,948,816 + IAI46_09090 0.89 +0.9 1,948,902 + +0.1 1,948,933 + -0.2 1,948,933 + -0.4 1,948,977 - +1.0 1,949,012 + -0.2 1,949,015 + +0.4 1,949,015 + +0.0 1,949,015 + -1.0 1,949,015 + -0.6 1,949,067 - -0.8 1,949,067 - -1.5 1,949,090 + -1.2 1,949,091 - -0.2 1,949,091 - -0.1 1,949,218 - -1.6 1,949,303 + -0.8 1,949,303 + +0.9 1,949,315 + +1.4 1,949,341 + +2.1 1,949,383 - +0.8 1,949,431 + +0.9 1,949,432 - +0.9 1,949,504 - IAI46_09095 0.26 -0.3 1,949,538 + IAI46_09095 0.37 +0.5 1,949,684 + IAI46_09095 0.86 +0.3 1,949,783 - -0.8 1,949,882 - +0.5 1,949,882 - -0.6 1,950,094 + IAI46_09100 0.36 +0.5 1,950,094 + IAI46_09100 0.36 -1.2 1,950,095 - IAI46_09100 0.37 +0.0 1,950,431 - IAI46_09100 0.83 +0.1 1,950,629 + +2.1 1,950,630 - -0.0 1,950,630 - +0.1 1,950,632 + +0.8 1,950,633 - -0.5 1,950,645 + -0.3 1,950,646 - +0.8 1,950,646 - -0.9 1,950,647 + +0.4 1,950,647 + -1.0 1,950,648 - +1.2 1,950,692 + IAI46_09105 0.13 +0.1 1,950,693 - IAI46_09105 0.13 +0.8
Or see this region's nucleotide sequence