Experiment: Cobalt chloride 80 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_06145 and IAI46_06150 are separated by 187 nucleotides IAI46_06150 and IAI46_06155 overlap by 1 nucleotides IAI46_06155 and IAI46_06160 are separated by 69 nucleotides
IAI46_06145: IAI46_06145 - alpha-D-glucose phosphate-specific phosphoglucomutase, at 1,314,715 to 1,316,358
_06145
IAI46_06150: IAI46_06150 - helix-turn-helix transcriptional regulator, at 1,316,546 to 1,317,208
_06150
IAI46_06155: IAI46_06155 - DUF3861 domain-containing protein, at 1,317,208 to 1,317,507
_06155
IAI46_06160: IAI46_06160 - two-component system response regulator KdpE, at 1,317,577 to 1,318,266
_06160
Position (kb)
1316
1317
1318 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1315.634 kb on - strand, within IAI46_06145 at 1315.649 kb on + strand, within IAI46_06145 at 1315.653 kb on + strand, within IAI46_06145 at 1315.653 kb on + strand, within IAI46_06145 at 1315.653 kb on + strand, within IAI46_06145 at 1315.654 kb on - strand, within IAI46_06145 at 1315.654 kb on - strand, within IAI46_06145 at 1315.684 kb on + strand, within IAI46_06145 at 1315.684 kb on + strand, within IAI46_06145 at 1315.706 kb on - strand, within IAI46_06145 at 1315.742 kb on + strand, within IAI46_06145 at 1316.048 kb on - strand, within IAI46_06145 at 1316.258 kb on - strand at 1316.267 kb on - strand at 1316.321 kb on + strand at 1316.356 kb on + strand at 1316.356 kb on + strand at 1316.356 kb on + strand at 1316.356 kb on + strand at 1316.423 kb on - strand at 1316.455 kb on + strand at 1316.478 kb on + strand at 1316.478 kb on + strand at 1316.480 kb on + strand at 1316.497 kb on + strand at 1316.499 kb on + strand at 1316.503 kb on + strand at 1316.538 kb on + strand at 1316.545 kb on + strand at 1316.545 kb on + strand at 1316.546 kb on - strand at 1316.565 kb on + strand at 1316.819 kb on + strand, within IAI46_06150 at 1316.819 kb on + strand, within IAI46_06150 at 1316.819 kb on + strand, within IAI46_06150 at 1317.187 kb on + strand at 1317.188 kb on - strand at 1317.188 kb on - strand at 1317.231 kb on + strand at 1317.313 kb on - strand, within IAI46_06155 at 1317.669 kb on + strand, within IAI46_06160 at 1317.669 kb on + strand, within IAI46_06160 at 1317.671 kb on + strand, within IAI46_06160 at 1317.701 kb on + strand, within IAI46_06160 at 1317.724 kb on + strand, within IAI46_06160 at 1317.724 kb on + strand, within IAI46_06160 at 1317.724 kb on + strand, within IAI46_06160 at 1317.725 kb on - strand, within IAI46_06160 at 1317.725 kb on - strand, within IAI46_06160 at 1317.725 kb on - strand, within IAI46_06160 at 1317.727 kb on + strand, within IAI46_06160 at 1317.728 kb on - strand, within IAI46_06160 at 1317.962 kb on + strand, within IAI46_06160 at 1317.962 kb on + strand, within IAI46_06160 at 1317.963 kb on - strand, within IAI46_06160 at 1317.963 kb on - strand, within IAI46_06160 at 1318.065 kb on + strand, within IAI46_06160 at 1318.066 kb on - strand, within IAI46_06160 at 1318.066 kb on - strand, within IAI46_06160 at 1318.067 kb on + strand, within IAI46_06160 at 1318.067 kb on + strand, within IAI46_06160 at 1318.068 kb on - strand, within IAI46_06160 at 1318.071 kb on + strand, within IAI46_06160 at 1318.072 kb on - strand, within IAI46_06160 at 1318.072 kb on - strand, within IAI46_06160
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 80 uM, aerobic remove 1,315,634 - IAI46_06145 0.56 -0.9 1,315,649 + IAI46_06145 0.57 -1.2 1,315,653 + IAI46_06145 0.57 -1.9 1,315,653 + IAI46_06145 0.57 +0.6 1,315,653 + IAI46_06145 0.57 -0.2 1,315,654 - IAI46_06145 0.57 +0.3 1,315,654 - IAI46_06145 0.57 +0.9 1,315,684 + IAI46_06145 0.59 -1.7 1,315,684 + IAI46_06145 0.59 -2.0 1,315,706 - IAI46_06145 0.60 +0.1 1,315,742 + IAI46_06145 0.62 -0.7 1,316,048 - IAI46_06145 0.81 -0.2 1,316,258 - -1.5 1,316,267 - -0.4 1,316,321 + -0.1 1,316,356 + -0.2 1,316,356 + -1.0 1,316,356 + +0.0 1,316,356 + -1.0 1,316,423 - -1.7 1,316,455 + -0.1 1,316,478 + -0.4 1,316,478 + +0.4 1,316,480 + +0.9 1,316,497 + +0.5 1,316,499 + +0.3 1,316,503 + -1.3 1,316,538 + +1.0 1,316,545 + +0.5 1,316,545 + +0.5 1,316,546 - -0.2 1,316,565 + -0.3 1,316,819 + IAI46_06150 0.41 -0.0 1,316,819 + IAI46_06150 0.41 -0.2 1,316,819 + IAI46_06150 0.41 +1.0 1,317,187 + -0.7 1,317,188 - +0.4 1,317,188 - -1.1 1,317,231 + -0.0 1,317,313 - IAI46_06155 0.35 -0.5 1,317,669 + IAI46_06160 0.13 -0.0 1,317,669 + IAI46_06160 0.13 -0.1 1,317,671 + IAI46_06160 0.14 +0.1 1,317,701 + IAI46_06160 0.18 -1.4 1,317,724 + IAI46_06160 0.21 +0.3 1,317,724 + IAI46_06160 0.21 +0.2 1,317,724 + IAI46_06160 0.21 +1.8 1,317,725 - IAI46_06160 0.21 +0.5 1,317,725 - IAI46_06160 0.21 +0.8 1,317,725 - IAI46_06160 0.21 -0.1 1,317,727 + IAI46_06160 0.22 +0.9 1,317,728 - IAI46_06160 0.22 +0.1 1,317,962 + IAI46_06160 0.56 +0.9 1,317,962 + IAI46_06160 0.56 +0.3 1,317,963 - IAI46_06160 0.56 +0.5 1,317,963 - IAI46_06160 0.56 +0.9 1,318,065 + IAI46_06160 0.71 +0.3 1,318,066 - IAI46_06160 0.71 -0.2 1,318,066 - IAI46_06160 0.71 -0.8 1,318,067 + IAI46_06160 0.71 +0.5 1,318,067 + IAI46_06160 0.71 -0.9 1,318,068 - IAI46_06160 0.71 +0.5 1,318,071 + IAI46_06160 0.72 -0.4 1,318,072 - IAI46_06160 0.72 -0.4 1,318,072 - IAI46_06160 0.72 +0.4
Or see this region's nucleotide sequence