Experiment: Cobalt chloride 80 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_04405 and IAI46_04410 are separated by 78 nucleotides IAI46_04410 and IAI46_04415 are separated by 324 nucleotides IAI46_04415 and IAI46_04420 are separated by 144 nucleotides
IAI46_04405: IAI46_04405 - DNA polymerase IV, at 942,414 to 943,475
_04405
IAI46_04410: IAI46_04410 - beta-Ala-His dipeptidase, at 943,554 to 945,014
_04410
IAI46_04415: IAI46_04415 - xanthine phosphoribosyltransferase, at 945,339 to 945,797
_04415
IAI46_04420: IAI46_04420 - esterase FrsA, at 945,942 to 947,189
_04420
Position (kb) 943
944
945
946 Strain fitness (log2 ratio) -2
-1
0
1 at 942.621 kb on - strand, within IAI46_04405 at 942.648 kb on + strand, within IAI46_04405 at 942.669 kb on - strand, within IAI46_04405 at 942.730 kb on - strand, within IAI46_04405 at 942.882 kb on - strand, within IAI46_04405 at 942.897 kb on + strand, within IAI46_04405 at 942.897 kb on + strand, within IAI46_04405 at 942.897 kb on + strand, within IAI46_04405 at 942.898 kb on - strand, within IAI46_04405 at 942.902 kb on + strand, within IAI46_04405 at 942.902 kb on + strand, within IAI46_04405 at 942.905 kb on + strand, within IAI46_04405 at 942.905 kb on + strand, within IAI46_04405 at 942.906 kb on - strand, within IAI46_04405 at 943.049 kb on - strand, within IAI46_04405 at 943.049 kb on - strand, within IAI46_04405 at 943.075 kb on + strand, within IAI46_04405 at 943.075 kb on + strand, within IAI46_04405 at 943.148 kb on - strand, within IAI46_04405 at 943.148 kb on - strand, within IAI46_04405 at 943.148 kb on - strand, within IAI46_04405 at 943.216 kb on - strand, within IAI46_04405 at 943.246 kb on + strand, within IAI46_04405 at 943.280 kb on - strand, within IAI46_04405 at 943.340 kb on + strand, within IAI46_04405 at 943.360 kb on + strand, within IAI46_04405 at 943.361 kb on - strand, within IAI46_04405 at 943.361 kb on - strand, within IAI46_04405 at 943.361 kb on - strand, within IAI46_04405 at 943.412 kb on - strand at 943.445 kb on - strand at 943.462 kb on + strand at 943.462 kb on + strand at 943.463 kb on - strand at 943.474 kb on - strand at 943.493 kb on - strand at 943.536 kb on + strand at 943.536 kb on + strand at 943.537 kb on - strand at 943.555 kb on + strand at 943.604 kb on - strand at 943.679 kb on + strand at 943.680 kb on - strand at 943.771 kb on + strand, within IAI46_04410 at 943.894 kb on + strand, within IAI46_04410 at 943.965 kb on + strand, within IAI46_04410 at 943.966 kb on - strand, within IAI46_04410 at 944.485 kb on + strand, within IAI46_04410 at 944.485 kb on + strand, within IAI46_04410 at 944.485 kb on + strand, within IAI46_04410 at 944.485 kb on + strand, within IAI46_04410 at 944.485 kb on + strand, within IAI46_04410 at 944.486 kb on - strand, within IAI46_04410 at 944.719 kb on + strand, within IAI46_04410 at 944.719 kb on + strand, within IAI46_04410 at 944.719 kb on + strand, within IAI46_04410 at 944.720 kb on - strand, within IAI46_04410 at 944.936 kb on - strand at 944.951 kb on + strand at 944.952 kb on - strand at 944.952 kb on - strand at 945.017 kb on + strand at 945.017 kb on + strand at 945.110 kb on + strand at 945.170 kb on + strand at 945.171 kb on - strand at 945.220 kb on + strand at 945.238 kb on + strand at 945.267 kb on + strand at 945.298 kb on + strand at 945.298 kb on + strand at 945.299 kb on - strand at 945.306 kb on - strand at 945.306 kb on - strand at 945.338 kb on + strand at 945.338 kb on + strand at 945.339 kb on - strand at 945.415 kb on + strand, within IAI46_04415 at 945.511 kb on + strand, within IAI46_04415 at 945.511 kb on + strand, within IAI46_04415 at 945.512 kb on - strand, within IAI46_04415 at 945.525 kb on + strand, within IAI46_04415 at 945.526 kb on - strand, within IAI46_04415 at 945.526 kb on - strand, within IAI46_04415 at 945.526 kb on - strand, within IAI46_04415 at 945.624 kb on - strand, within IAI46_04415 at 945.648 kb on + strand, within IAI46_04415 at 945.649 kb on - strand, within IAI46_04415 at 945.649 kb on - strand, within IAI46_04415 at 945.649 kb on - strand, within IAI46_04415 at 945.712 kb on - strand, within IAI46_04415 at 945.818 kb on - strand at 945.849 kb on - strand at 945.872 kb on + strand at 945.876 kb on + strand at 945.876 kb on + strand at 945.877 kb on - strand at 945.877 kb on - strand at 945.877 kb on - strand at 945.881 kb on + strand at 945.882 kb on - strand at 945.882 kb on - strand at 945.882 kb on - strand at 945.896 kb on - strand at 945.911 kb on + strand at 945.911 kb on + strand at 945.912 kb on - strand at 945.912 kb on - strand at 945.923 kb on + strand at 945.924 kb on - strand at 945.986 kb on + strand at 945.986 kb on + strand at 945.987 kb on - strand at 945.987 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 80 uM, aerobic remove 942,621 - IAI46_04405 0.19 -0.9 942,648 + IAI46_04405 0.22 -0.5 942,669 - IAI46_04405 0.24 +0.7 942,730 - IAI46_04405 0.30 +0.3 942,882 - IAI46_04405 0.44 +0.6 942,897 + IAI46_04405 0.45 +0.4 942,897 + IAI46_04405 0.45 +0.7 942,897 + IAI46_04405 0.45 -0.2 942,898 - IAI46_04405 0.46 +0.7 942,902 + IAI46_04405 0.46 +0.0 942,902 + IAI46_04405 0.46 +1.0 942,905 + IAI46_04405 0.46 +0.6 942,905 + IAI46_04405 0.46 +0.5 942,906 - IAI46_04405 0.46 +0.1 943,049 - IAI46_04405 0.60 +1.1 943,049 - IAI46_04405 0.60 +1.0 943,075 + IAI46_04405 0.62 -0.2 943,075 + IAI46_04405 0.62 +1.2 943,148 - IAI46_04405 0.69 +0.2 943,148 - IAI46_04405 0.69 +0.6 943,148 - IAI46_04405 0.69 +0.6 943,216 - IAI46_04405 0.76 -0.4 943,246 + IAI46_04405 0.78 +0.9 943,280 - IAI46_04405 0.82 +0.5 943,340 + IAI46_04405 0.87 -0.4 943,360 + IAI46_04405 0.89 +1.0 943,361 - IAI46_04405 0.89 +0.1 943,361 - IAI46_04405 0.89 -0.2 943,361 - IAI46_04405 0.89 -0.1 943,412 - -1.2 943,445 - +0.7 943,462 + +0.1 943,462 + +0.9 943,463 - +1.2 943,474 - -0.4 943,493 - +0.3 943,536 + +1.2 943,536 + -0.1 943,537 - +0.3 943,555 + +0.2 943,604 - +0.5 943,679 + +0.1 943,680 - -0.1 943,771 + IAI46_04410 0.15 -0.5 943,894 + IAI46_04410 0.23 +0.9 943,965 + IAI46_04410 0.28 +0.2 943,966 - IAI46_04410 0.28 +0.7 944,485 + IAI46_04410 0.64 +0.7 944,485 + IAI46_04410 0.64 +1.0 944,485 + IAI46_04410 0.64 +0.1 944,485 + IAI46_04410 0.64 +0.3 944,485 + IAI46_04410 0.64 -0.2 944,486 - IAI46_04410 0.64 -0.4 944,719 + IAI46_04410 0.80 -0.3 944,719 + IAI46_04410 0.80 +1.3 944,719 + IAI46_04410 0.80 +0.3 944,720 - IAI46_04410 0.80 -1.2 944,936 - +1.2 944,951 + +0.9 944,952 - -1.3 944,952 - -0.2 945,017 + +1.4 945,017 + -1.1 945,110 + -0.3 945,170 + -0.3 945,171 - +0.9 945,220 + -1.5 945,238 + -0.0 945,267 + +0.8 945,298 + -0.3 945,298 + +1.0 945,299 - +0.2 945,306 - +0.1 945,306 - -0.2 945,338 + +1.3 945,338 + -1.0 945,339 - -0.8 945,415 + IAI46_04415 0.17 +1.0 945,511 + IAI46_04415 0.37 +0.3 945,511 + IAI46_04415 0.37 -0.4 945,512 - IAI46_04415 0.38 +0.7 945,525 + IAI46_04415 0.41 +0.5 945,526 - IAI46_04415 0.41 +0.1 945,526 - IAI46_04415 0.41 -0.4 945,526 - IAI46_04415 0.41 +0.5 945,624 - IAI46_04415 0.62 -2.7 945,648 + IAI46_04415 0.67 -0.8 945,649 - IAI46_04415 0.68 -0.1 945,649 - IAI46_04415 0.68 +0.4 945,649 - IAI46_04415 0.68 +0.2 945,712 - IAI46_04415 0.81 -0.2 945,818 - +0.7 945,849 - -0.6 945,872 + +0.7 945,876 + +0.8 945,876 + +0.8 945,877 - -0.8 945,877 - -0.4 945,877 - -0.8 945,881 + -0.4 945,882 - +0.1 945,882 - +1.6 945,882 - +0.2 945,896 - -0.1 945,911 + +0.1 945,911 + -1.2 945,912 - -0.2 945,912 - +0.7 945,923 + -0.5 945,924 - +0.6 945,986 + -0.2 945,986 + -0.1 945,987 - -0.2 945,987 - -0.1
Or see this region's nucleotide sequence