Experiment: Cobalt chloride 80 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_03690 and IAI46_03695 are separated by 70 nucleotides IAI46_03695 and IAI46_03700 are separated by 61 nucleotides IAI46_03700 and IAI46_03705 are separated by 275 nucleotides IAI46_03705 and IAI46_03710 are separated by 187 nucleotides
IAI46_03690: IAI46_03690 - assimilatory sulfite reductase (NADPH) hemoprotein subunit, at 804,909 to 806,624
_03690
IAI46_03695: IAI46_03695 - phosphoadenylyl-sulfate reductase, at 806,695 to 807,429
_03695
IAI46_03700: IAI46_03700 - aminopeptidase, at 807,491 to 808,567
_03700
IAI46_03705: IAI46_03705 - hypothetical protein, at 808,843 to 809,109
_03705
IAI46_03710: IAI46_03710 - uroporphyrinogen-III C-methyltransferase, at 809,297 to 810,727
_03710
Position (kb) 807
808
809 Strain fitness (log2 ratio) -2
-1
0
1
2 at 806.593 kb on + strand at 806.667 kb on - strand at 806.762 kb on + strand at 806.762 kb on + strand at 806.763 kb on - strand at 806.766 kb on + strand at 806.767 kb on - strand at 806.767 kb on - strand at 806.767 kb on - strand at 806.873 kb on + strand, within IAI46_03695 at 806.873 kb on + strand, within IAI46_03695 at 806.874 kb on - strand, within IAI46_03695 at 806.936 kb on - strand, within IAI46_03695 at 806.953 kb on + strand, within IAI46_03695 at 806.953 kb on + strand, within IAI46_03695 at 807.085 kb on + strand, within IAI46_03695 at 807.086 kb on - strand, within IAI46_03695 at 807.088 kb on - strand, within IAI46_03695 at 807.200 kb on + strand, within IAI46_03695 at 807.272 kb on - strand, within IAI46_03695 at 807.295 kb on + strand, within IAI46_03695 at 807.296 kb on - strand, within IAI46_03695 at 807.296 kb on - strand, within IAI46_03695 at 807.296 kb on - strand, within IAI46_03695 at 807.319 kb on + strand, within IAI46_03695 at 807.319 kb on + strand, within IAI46_03695 at 807.319 kb on + strand, within IAI46_03695 at 807.319 kb on + strand, within IAI46_03695 at 807.320 kb on - strand, within IAI46_03695 at 807.320 kb on - strand, within IAI46_03695 at 807.320 kb on - strand, within IAI46_03695 at 807.428 kb on - strand at 807.428 kb on - strand at 807.435 kb on + strand at 807.436 kb on - strand at 807.436 kb on - strand at 807.494 kb on - strand at 807.616 kb on - strand, within IAI46_03700 at 807.895 kb on + strand, within IAI46_03700 at 807.915 kb on + strand, within IAI46_03700 at 807.916 kb on - strand, within IAI46_03700 at 807.950 kb on - strand, within IAI46_03700 at 807.960 kb on - strand, within IAI46_03700 at 807.964 kb on + strand, within IAI46_03700 at 807.965 kb on - strand, within IAI46_03700 at 807.999 kb on + strand, within IAI46_03700 at 808.078 kb on + strand, within IAI46_03700 at 808.079 kb on - strand, within IAI46_03700 at 808.191 kb on + strand, within IAI46_03700 at 808.191 kb on + strand, within IAI46_03700 at 808.191 kb on + strand, within IAI46_03700 at 808.192 kb on - strand, within IAI46_03700 at 808.192 kb on - strand, within IAI46_03700 at 808.243 kb on + strand, within IAI46_03700 at 808.274 kb on - strand, within IAI46_03700 at 808.305 kb on + strand, within IAI46_03700 at 808.306 kb on - strand, within IAI46_03700 at 808.622 kb on + strand at 808.623 kb on - strand at 808.643 kb on - strand at 808.643 kb on - strand at 808.757 kb on + strand at 808.757 kb on + strand at 808.757 kb on + strand at 808.758 kb on - strand at 808.760 kb on + strand at 808.760 kb on + strand at 808.773 kb on - strand at 808.776 kb on + strand at 808.776 kb on + strand at 808.776 kb on + strand at 808.777 kb on - strand at 808.777 kb on - strand at 808.777 kb on - strand at 808.789 kb on - strand at 808.789 kb on - strand at 808.789 kb on - strand at 808.799 kb on - strand at 808.894 kb on + strand, within IAI46_03705 at 808.895 kb on - strand, within IAI46_03705 at 808.895 kb on - strand, within IAI46_03705 at 808.911 kb on + strand, within IAI46_03705 at 808.911 kb on + strand, within IAI46_03705 at 808.979 kb on + strand, within IAI46_03705 at 808.983 kb on + strand, within IAI46_03705 at 808.984 kb on - strand, within IAI46_03705 at 808.984 kb on - strand, within IAI46_03705 at 808.984 kb on - strand, within IAI46_03705 at 808.984 kb on - strand, within IAI46_03705 at 808.984 kb on - strand, within IAI46_03705 at 809.018 kb on + strand, within IAI46_03705 at 809.025 kb on + strand, within IAI46_03705 at 809.025 kb on + strand, within IAI46_03705 at 809.025 kb on + strand, within IAI46_03705 at 809.059 kb on - strand, within IAI46_03705 at 809.141 kb on + strand at 809.141 kb on + strand at 809.142 kb on - strand at 809.167 kb on + strand at 809.167 kb on + strand at 809.199 kb on - strand at 809.207 kb on - strand at 809.214 kb on + strand at 809.215 kb on - strand at 809.215 kb on - strand at 809.215 kb on - strand at 809.258 kb on - strand at 809.258 kb on - strand at 809.259 kb on + strand at 809.260 kb on - strand at 809.260 kb on - strand at 809.268 kb on + strand at 809.268 kb on + strand at 809.268 kb on + strand at 809.280 kb on + strand at 809.281 kb on - strand at 809.281 kb on - strand at 809.281 kb on - strand at 809.282 kb on + strand at 809.282 kb on + strand at 809.282 kb on + strand at 809.283 kb on - strand at 809.283 kb on - strand at 809.283 kb on - strand at 809.303 kb on + strand at 809.303 kb on + strand at 809.303 kb on + strand at 809.304 kb on - strand at 809.304 kb on - strand at 809.304 kb on - strand at 809.307 kb on + strand at 809.307 kb on + strand at 809.307 kb on + strand at 809.308 kb on - strand at 809.308 kb on - strand at 809.308 kb on - strand at 809.308 kb on - strand at 809.311 kb on + strand at 809.311 kb on + strand at 809.311 kb on + strand at 809.312 kb on - strand at 809.314 kb on - strand at 809.409 kb on + strand at 809.410 kb on - strand at 809.410 kb on - strand at 809.415 kb on + strand at 809.416 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 80 uM, aerobic remove 806,593 + +0.8 806,667 - -0.7 806,762 + -0.3 806,762 + +0.2 806,763 - -0.5 806,766 + -1.2 806,767 - +0.1 806,767 - -0.1 806,767 - -0.8 806,873 + IAI46_03695 0.24 +1.0 806,873 + IAI46_03695 0.24 -1.3 806,874 - IAI46_03695 0.24 -1.3 806,936 - IAI46_03695 0.33 -0.8 806,953 + IAI46_03695 0.35 +0.5 806,953 + IAI46_03695 0.35 -0.7 807,085 + IAI46_03695 0.53 +0.1 807,086 - IAI46_03695 0.53 +0.2 807,088 - IAI46_03695 0.53 +0.1 807,200 + IAI46_03695 0.69 -0.4 807,272 - IAI46_03695 0.79 -1.1 807,295 + IAI46_03695 0.82 -0.2 807,296 - IAI46_03695 0.82 -1.7 807,296 - IAI46_03695 0.82 +0.0 807,296 - IAI46_03695 0.82 +0.4 807,319 + IAI46_03695 0.85 +0.5 807,319 + IAI46_03695 0.85 -0.4 807,319 + IAI46_03695 0.85 -0.1 807,319 + IAI46_03695 0.85 -1.7 807,320 - IAI46_03695 0.85 -0.2 807,320 - IAI46_03695 0.85 -0.1 807,320 - IAI46_03695 0.85 -2.0 807,428 - +0.6 807,428 - +0.9 807,435 + +1.2 807,436 - -0.5 807,436 - +0.1 807,494 - +0.6 807,616 - IAI46_03700 0.12 +0.3 807,895 + IAI46_03700 0.38 -0.3 807,915 + IAI46_03700 0.39 -0.5 807,916 - IAI46_03700 0.39 -0.1 807,950 - IAI46_03700 0.43 -0.4 807,960 - IAI46_03700 0.44 -0.9 807,964 + IAI46_03700 0.44 -0.0 807,965 - IAI46_03700 0.44 +1.4 807,999 + IAI46_03700 0.47 -0.9 808,078 + IAI46_03700 0.55 +0.4 808,079 - IAI46_03700 0.55 +0.5 808,191 + IAI46_03700 0.65 +0.5 808,191 + IAI46_03700 0.65 -0.3 808,191 + IAI46_03700 0.65 -0.3 808,192 - IAI46_03700 0.65 +0.7 808,192 - IAI46_03700 0.65 -1.4 808,243 + IAI46_03700 0.70 +1.3 808,274 - IAI46_03700 0.73 -1.0 808,305 + IAI46_03700 0.76 +1.5 808,306 - IAI46_03700 0.76 -0.5 808,622 + +0.5 808,623 - +0.5 808,643 - +0.5 808,643 - -0.4 808,757 + -0.1 808,757 + +1.1 808,757 + -0.4 808,758 - -1.2 808,760 + +0.6 808,760 + +1.1 808,773 - -1.0 808,776 + +0.6 808,776 + +0.7 808,776 + +0.8 808,777 - -0.5 808,777 - +0.5 808,777 - -1.1 808,789 - +0.3 808,789 - -0.1 808,789 - +0.4 808,799 - -1.0 808,894 + IAI46_03705 0.19 -0.1 808,895 - IAI46_03705 0.19 -0.4 808,895 - IAI46_03705 0.19 +2.3 808,911 + IAI46_03705 0.25 +1.6 808,911 + IAI46_03705 0.25 -0.2 808,979 + IAI46_03705 0.51 -0.3 808,983 + IAI46_03705 0.52 +1.4 808,984 - IAI46_03705 0.53 -0.7 808,984 - IAI46_03705 0.53 -0.6 808,984 - IAI46_03705 0.53 -0.2 808,984 - IAI46_03705 0.53 +0.1 808,984 - IAI46_03705 0.53 +0.7 809,018 + IAI46_03705 0.66 +0.3 809,025 + IAI46_03705 0.68 +0.3 809,025 + IAI46_03705 0.68 -0.9 809,025 + IAI46_03705 0.68 +0.3 809,059 - IAI46_03705 0.81 -1.0 809,141 + +0.3 809,141 + -0.5 809,142 - -0.4 809,167 + +0.7 809,167 + -0.1 809,199 - +0.7 809,207 - -0.4 809,214 + -0.1 809,215 - +0.5 809,215 - +0.2 809,215 - +0.7 809,258 - +0.3 809,258 - -0.1 809,259 + -0.5 809,260 - -0.1 809,260 - +0.1 809,268 + +1.7 809,268 + +0.9 809,268 + -0.1 809,280 + +0.4 809,281 - -0.7 809,281 - +1.0 809,281 - +1.1 809,282 + -0.4 809,282 + +0.9 809,282 + +0.5 809,283 - -0.3 809,283 - -0.2 809,283 - +0.4 809,303 + -1.4 809,303 + +1.6 809,303 + +0.6 809,304 - +0.1 809,304 - +0.3 809,304 - +0.5 809,307 + -1.5 809,307 + -0.1 809,307 + +1.0 809,308 - +0.5 809,308 - +0.0 809,308 - +1.6 809,308 - +0.2 809,311 + -0.6 809,311 + +0.4 809,311 + +0.7 809,312 - +0.1 809,314 - -0.6 809,409 + +0.0 809,410 - -0.5 809,410 - +0.5 809,415 + -0.1 809,416 - -0.1
Or see this region's nucleotide sequence