Experiment: Cobalt chloride 80 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_03595 and IAI46_03600 are separated by 9 nucleotides IAI46_03600 and IAI46_03605 are separated by 155 nucleotides
IAI46_03595: IAI46_03595 - 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD, at 779,373 to 780,722
_03595
IAI46_03600: IAI46_03600 - GTP diphosphokinase, at 780,732 to 782,963
_03600
IAI46_03605: IAI46_03605 - nucleoside triphosphate pyrophosphohydrolase, at 783,119 to 783,913
_03605
Position (kb) 780
781
782
783 Strain fitness (log2 ratio) -2
-1
0
1
2 at 779.772 kb on + strand, within IAI46_03595 at 780.091 kb on - strand, within IAI46_03595 at 780.111 kb on - strand, within IAI46_03595 at 780.141 kb on + strand, within IAI46_03595 at 780.141 kb on + strand, within IAI46_03595 at 780.141 kb on + strand, within IAI46_03595 at 780.141 kb on + strand, within IAI46_03595 at 780.142 kb on - strand, within IAI46_03595 at 780.142 kb on - strand, within IAI46_03595 at 780.145 kb on - strand, within IAI46_03595 at 780.161 kb on - strand, within IAI46_03595 at 780.161 kb on - strand, within IAI46_03595 at 780.166 kb on + strand, within IAI46_03595 at 780.166 kb on + strand, within IAI46_03595 at 780.167 kb on - strand, within IAI46_03595 at 780.167 kb on - strand, within IAI46_03595 at 780.196 kb on + strand, within IAI46_03595 at 780.196 kb on + strand, within IAI46_03595 at 780.208 kb on + strand, within IAI46_03595 at 780.208 kb on + strand, within IAI46_03595 at 780.209 kb on - strand, within IAI46_03595 at 780.209 kb on - strand, within IAI46_03595 at 780.209 kb on - strand, within IAI46_03595 at 780.248 kb on + strand, within IAI46_03595 at 780.248 kb on + strand, within IAI46_03595 at 780.249 kb on - strand, within IAI46_03595 at 780.340 kb on + strand, within IAI46_03595 at 780.340 kb on + strand, within IAI46_03595 at 780.340 kb on + strand, within IAI46_03595 at 780.340 kb on + strand, within IAI46_03595 at 780.341 kb on - strand, within IAI46_03595 at 780.341 kb on - strand, within IAI46_03595 at 780.341 kb on - strand, within IAI46_03595 at 780.341 kb on - strand, within IAI46_03595 at 780.341 kb on - strand, within IAI46_03595 at 780.341 kb on - strand, within IAI46_03595 at 780.362 kb on - strand, within IAI46_03595 at 780.362 kb on - strand, within IAI46_03595 at 780.376 kb on - strand, within IAI46_03595 at 780.377 kb on + strand, within IAI46_03595 at 780.377 kb on + strand, within IAI46_03595 at 780.378 kb on - strand, within IAI46_03595 at 780.386 kb on + strand, within IAI46_03595 at 780.387 kb on - strand, within IAI46_03595 at 780.390 kb on - strand, within IAI46_03595 at 780.393 kb on - strand, within IAI46_03595 at 780.524 kb on + strand, within IAI46_03595 at 780.525 kb on - strand, within IAI46_03595 at 780.531 kb on - strand, within IAI46_03595 at 780.555 kb on + strand, within IAI46_03595 at 780.555 kb on + strand, within IAI46_03595 at 780.555 kb on + strand, within IAI46_03595 at 780.556 kb on - strand, within IAI46_03595 at 780.556 kb on - strand, within IAI46_03595 at 780.556 kb on - strand, within IAI46_03595 at 780.644 kb on + strand at 780.644 kb on + strand at 780.721 kb on - strand at 780.721 kb on - strand at 780.813 kb on - strand at 780.881 kb on + strand at 780.881 kb on + strand at 780.932 kb on + strand at 781.044 kb on + strand, within IAI46_03600 at 781.044 kb on + strand, within IAI46_03600 at 781.044 kb on + strand, within IAI46_03600 at 781.045 kb on - strand, within IAI46_03600 at 781.045 kb on - strand, within IAI46_03600 at 781.067 kb on + strand, within IAI46_03600 at 781.271 kb on + strand, within IAI46_03600 at 781.275 kb on + strand, within IAI46_03600 at 781.275 kb on + strand, within IAI46_03600 at 781.275 kb on + strand, within IAI46_03600 at 781.276 kb on - strand, within IAI46_03600 at 781.276 kb on - strand, within IAI46_03600 at 781.276 kb on - strand, within IAI46_03600 at 781.362 kb on + strand, within IAI46_03600 at 781.363 kb on - strand, within IAI46_03600 at 781.363 kb on - strand, within IAI46_03600 at 781.363 kb on - strand, within IAI46_03600 at 781.443 kb on - strand, within IAI46_03600 at 781.479 kb on + strand, within IAI46_03600 at 781.479 kb on + strand, within IAI46_03600 at 781.479 kb on + strand, within IAI46_03600 at 781.479 kb on + strand, within IAI46_03600 at 781.479 kb on + strand, within IAI46_03600 at 781.480 kb on - strand, within IAI46_03600 at 781.480 kb on - strand, within IAI46_03600 at 781.500 kb on + strand, within IAI46_03600 at 781.500 kb on + strand, within IAI46_03600 at 781.501 kb on - strand, within IAI46_03600 at 781.501 kb on - strand, within IAI46_03600 at 781.600 kb on - strand, within IAI46_03600 at 781.622 kb on + strand, within IAI46_03600 at 781.660 kb on - strand, within IAI46_03600 at 781.660 kb on - strand, within IAI46_03600 at 781.660 kb on - strand, within IAI46_03600 at 781.705 kb on + strand, within IAI46_03600 at 781.705 kb on + strand, within IAI46_03600 at 781.705 kb on + strand, within IAI46_03600 at 781.705 kb on + strand, within IAI46_03600 at 781.705 kb on + strand, within IAI46_03600 at 781.706 kb on - strand, within IAI46_03600 at 781.708 kb on + strand, within IAI46_03600 at 781.708 kb on + strand, within IAI46_03600 at 781.837 kb on - strand, within IAI46_03600 at 781.948 kb on - strand, within IAI46_03600 at 781.951 kb on + strand, within IAI46_03600 at 781.951 kb on + strand, within IAI46_03600 at 781.951 kb on + strand, within IAI46_03600 at 781.952 kb on - strand, within IAI46_03600 at 781.952 kb on - strand, within IAI46_03600 at 781.994 kb on + strand, within IAI46_03600 at 781.995 kb on - strand, within IAI46_03600 at 782.013 kb on + strand, within IAI46_03600 at 782.014 kb on - strand, within IAI46_03600 at 782.014 kb on - strand, within IAI46_03600 at 782.018 kb on + strand, within IAI46_03600 at 782.018 kb on + strand, within IAI46_03600 at 782.018 kb on + strand, within IAI46_03600 at 782.018 kb on + strand, within IAI46_03600 at 782.019 kb on - strand, within IAI46_03600 at 782.081 kb on + strand, within IAI46_03600 at 782.081 kb on + strand, within IAI46_03600 at 782.081 kb on + strand, within IAI46_03600 at 782.081 kb on + strand, within IAI46_03600 at 782.081 kb on + strand, within IAI46_03600 at 782.085 kb on + strand, within IAI46_03600 at 782.172 kb on + strand, within IAI46_03600 at 782.173 kb on - strand, within IAI46_03600 at 782.173 kb on - strand, within IAI46_03600 at 782.173 kb on - strand, within IAI46_03600 at 782.174 kb on + strand, within IAI46_03600 at 782.174 kb on + strand, within IAI46_03600 at 782.174 kb on + strand, within IAI46_03600 at 782.328 kb on + strand, within IAI46_03600 at 782.329 kb on - strand, within IAI46_03600 at 782.378 kb on + strand, within IAI46_03600 at 782.378 kb on + strand, within IAI46_03600 at 782.379 kb on - strand, within IAI46_03600 at 782.379 kb on - strand, within IAI46_03600 at 782.533 kb on + strand, within IAI46_03600 at 782.588 kb on + strand, within IAI46_03600 at 782.589 kb on - strand, within IAI46_03600 at 782.681 kb on + strand, within IAI46_03600 at 782.709 kb on + strand, within IAI46_03600 at 782.710 kb on - strand, within IAI46_03600 at 782.722 kb on - strand, within IAI46_03600 at 782.860 kb on - strand at 782.862 kb on - strand at 782.877 kb on + strand at 782.890 kb on + strand at 782.891 kb on - strand at 782.891 kb on - strand at 782.935 kb on + strand at 782.961 kb on + strand at 782.961 kb on + strand at 783.081 kb on + strand at 783.081 kb on + strand at 783.081 kb on + strand at 783.119 kb on - strand at 783.231 kb on - strand, within IAI46_03605 at 783.255 kb on + strand, within IAI46_03605 at 783.332 kb on + strand, within IAI46_03605 at 783.332 kb on + strand, within IAI46_03605 at 783.333 kb on - strand, within IAI46_03605 at 783.333 kb on - strand, within IAI46_03605 at 783.382 kb on + strand, within IAI46_03605 at 783.382 kb on + strand, within IAI46_03605 at 783.607 kb on + strand, within IAI46_03605 at 783.607 kb on + strand, within IAI46_03605 at 783.607 kb on + strand, within IAI46_03605 at 783.608 kb on - strand, within IAI46_03605 at 783.608 kb on - strand, within IAI46_03605 at 783.608 kb on - strand, within IAI46_03605 at 783.635 kb on + strand, within IAI46_03605 at 783.635 kb on + strand, within IAI46_03605 at 783.636 kb on - strand, within IAI46_03605 at 783.636 kb on - strand, within IAI46_03605 at 783.757 kb on + strand, within IAI46_03605 at 783.758 kb on - strand, within IAI46_03605 at 783.817 kb on - strand, within IAI46_03605 at 783.817 kb on - strand, within IAI46_03605 at 783.826 kb on + strand, within IAI46_03605 at 783.826 kb on + strand, within IAI46_03605 at 783.827 kb on - strand, within IAI46_03605 at 783.912 kb on - strand at 783.932 kb on + strand at 783.932 kb on + strand at 783.947 kb on - strand at 783.952 kb on - strand at 783.952 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 80 uM, aerobic remove 779,772 + IAI46_03595 0.30 +0.5 780,091 - IAI46_03595 0.53 -0.1 780,111 - IAI46_03595 0.55 +1.3 780,141 + IAI46_03595 0.57 +0.3 780,141 + IAI46_03595 0.57 +0.3 780,141 + IAI46_03595 0.57 +1.2 780,141 + IAI46_03595 0.57 +0.6 780,142 - IAI46_03595 0.57 +0.5 780,142 - IAI46_03595 0.57 +1.5 780,145 - IAI46_03595 0.57 +0.5 780,161 - IAI46_03595 0.58 +0.8 780,161 - IAI46_03595 0.58 +0.3 780,166 + IAI46_03595 0.59 -1.4 780,166 + IAI46_03595 0.59 +0.4 780,167 - IAI46_03595 0.59 -0.3 780,167 - IAI46_03595 0.59 -0.1 780,196 + IAI46_03595 0.61 -0.0 780,196 + IAI46_03595 0.61 +0.7 780,208 + IAI46_03595 0.62 +1.9 780,208 + IAI46_03595 0.62 +0.0 780,209 - IAI46_03595 0.62 +0.9 780,209 - IAI46_03595 0.62 -0.4 780,209 - IAI46_03595 0.62 +0.5 780,248 + IAI46_03595 0.65 +1.7 780,248 + IAI46_03595 0.65 +0.3 780,249 - IAI46_03595 0.65 +0.7 780,340 + IAI46_03595 0.72 +1.7 780,340 + IAI46_03595 0.72 -0.0 780,340 + IAI46_03595 0.72 +1.1 780,340 + IAI46_03595 0.72 +0.2 780,341 - IAI46_03595 0.72 +1.3 780,341 - IAI46_03595 0.72 +0.4 780,341 - IAI46_03595 0.72 -0.0 780,341 - IAI46_03595 0.72 +0.1 780,341 - IAI46_03595 0.72 +0.3 780,341 - IAI46_03595 0.72 +0.7 780,362 - IAI46_03595 0.73 +0.3 780,362 - IAI46_03595 0.73 +0.4 780,376 - IAI46_03595 0.74 -0.2 780,377 + IAI46_03595 0.74 -0.9 780,377 + IAI46_03595 0.74 +0.1 780,378 - IAI46_03595 0.74 -2.0 780,386 + IAI46_03595 0.75 +0.5 780,387 - IAI46_03595 0.75 -0.1 780,390 - IAI46_03595 0.75 -0.3 780,393 - IAI46_03595 0.76 -0.1 780,524 + IAI46_03595 0.85 +0.2 780,525 - IAI46_03595 0.85 +0.3 780,531 - IAI46_03595 0.86 +0.6 780,555 + IAI46_03595 0.88 +0.2 780,555 + IAI46_03595 0.88 -0.9 780,555 + IAI46_03595 0.88 -0.1 780,556 - IAI46_03595 0.88 +0.3 780,556 - IAI46_03595 0.88 -1.7 780,556 - IAI46_03595 0.88 -0.1 780,644 + -1.4 780,644 + +0.2 780,721 - +0.2 780,721 - -2.4 780,813 - -2.0 780,881 + -0.6 780,881 + -0.5 780,932 + -1.3 781,044 + IAI46_03600 0.14 +0.7 781,044 + IAI46_03600 0.14 +1.2 781,044 + IAI46_03600 0.14 -0.4 781,045 - IAI46_03600 0.14 -2.2 781,045 - IAI46_03600 0.14 -0.2 781,067 + IAI46_03600 0.15 -1.4 781,271 + IAI46_03600 0.24 +0.2 781,275 + IAI46_03600 0.24 +0.5 781,275 + IAI46_03600 0.24 -1.8 781,275 + IAI46_03600 0.24 -1.2 781,276 - IAI46_03600 0.24 -1.7 781,276 - IAI46_03600 0.24 -0.3 781,276 - IAI46_03600 0.24 +0.6 781,362 + IAI46_03600 0.28 +0.2 781,363 - IAI46_03600 0.28 -0.8 781,363 - IAI46_03600 0.28 -0.3 781,363 - IAI46_03600 0.28 -2.6 781,443 - IAI46_03600 0.32 -1.2 781,479 + IAI46_03600 0.33 -0.4 781,479 + IAI46_03600 0.33 -1.3 781,479 + IAI46_03600 0.33 -2.1 781,479 + IAI46_03600 0.33 -0.9 781,479 + IAI46_03600 0.33 -0.7 781,480 - IAI46_03600 0.34 -1.0 781,480 - IAI46_03600 0.34 -1.4 781,500 + IAI46_03600 0.34 -0.0 781,500 + IAI46_03600 0.34 -0.2 781,501 - IAI46_03600 0.34 -1.1 781,501 - IAI46_03600 0.34 -0.8 781,600 - IAI46_03600 0.39 -0.3 781,622 + IAI46_03600 0.40 -0.2 781,660 - IAI46_03600 0.42 -1.1 781,660 - IAI46_03600 0.42 -2.0 781,660 - IAI46_03600 0.42 +0.4 781,705 + IAI46_03600 0.44 -2.0 781,705 + IAI46_03600 0.44 +0.4 781,705 + IAI46_03600 0.44 -1.3 781,705 + IAI46_03600 0.44 -0.7 781,705 + IAI46_03600 0.44 -1.7 781,706 - IAI46_03600 0.44 -0.6 781,708 + IAI46_03600 0.44 -0.6 781,708 + IAI46_03600 0.44 -1.0 781,837 - IAI46_03600 0.50 -0.9 781,948 - IAI46_03600 0.54 +0.2 781,951 + IAI46_03600 0.55 -0.8 781,951 + IAI46_03600 0.55 -0.4 781,951 + IAI46_03600 0.55 -0.3 781,952 - IAI46_03600 0.55 +0.4 781,952 - IAI46_03600 0.55 +0.1 781,994 + IAI46_03600 0.57 -0.6 781,995 - IAI46_03600 0.57 -0.4 782,013 + IAI46_03600 0.57 -1.4 782,014 - IAI46_03600 0.57 +1.3 782,014 - IAI46_03600 0.57 +0.1 782,018 + IAI46_03600 0.58 +0.6 782,018 + IAI46_03600 0.58 -0.4 782,018 + IAI46_03600 0.58 +0.4 782,018 + IAI46_03600 0.58 +0.7 782,019 - IAI46_03600 0.58 -0.0 782,081 + IAI46_03600 0.60 +0.4 782,081 + IAI46_03600 0.60 +1.0 782,081 + IAI46_03600 0.60 -0.7 782,081 + IAI46_03600 0.60 -1.0 782,081 + IAI46_03600 0.60 -2.2 782,085 + IAI46_03600 0.61 +0.1 782,172 + IAI46_03600 0.65 -0.9 782,173 - IAI46_03600 0.65 -0.2 782,173 - IAI46_03600 0.65 -0.4 782,173 - IAI46_03600 0.65 +0.3 782,174 + IAI46_03600 0.65 -0.9 782,174 + IAI46_03600 0.65 -1.0 782,174 + IAI46_03600 0.65 -1.5 782,328 + IAI46_03600 0.72 +0.2 782,329 - IAI46_03600 0.72 +0.0 782,378 + IAI46_03600 0.74 -0.7 782,378 + IAI46_03600 0.74 +0.3 782,379 - IAI46_03600 0.74 -1.0 782,379 - IAI46_03600 0.74 -0.7 782,533 + IAI46_03600 0.81 -0.0 782,588 + IAI46_03600 0.83 -1.6 782,589 - IAI46_03600 0.83 +0.9 782,681 + IAI46_03600 0.87 -1.4 782,709 + IAI46_03600 0.89 -0.0 782,710 - IAI46_03600 0.89 -0.4 782,722 - IAI46_03600 0.89 +0.3 782,860 - -1.1 782,862 - -1.4 782,877 + +0.2 782,890 + +0.1 782,891 - -0.8 782,891 - -1.1 782,935 + +0.4 782,961 + -0.2 782,961 + +1.3 783,081 + -0.2 783,081 + +0.7 783,081 + -0.8 783,119 - -0.1 783,231 - IAI46_03605 0.14 -0.4 783,255 + IAI46_03605 0.17 -0.3 783,332 + IAI46_03605 0.27 -0.1 783,332 + IAI46_03605 0.27 +0.7 783,333 - IAI46_03605 0.27 -0.2 783,333 - IAI46_03605 0.27 +0.0 783,382 + IAI46_03605 0.33 -0.3 783,382 + IAI46_03605 0.33 -0.2 783,607 + IAI46_03605 0.61 +0.6 783,607 + IAI46_03605 0.61 +0.8 783,607 + IAI46_03605 0.61 +0.1 783,608 - IAI46_03605 0.62 -0.4 783,608 - IAI46_03605 0.62 +0.3 783,608 - IAI46_03605 0.62 -0.1 783,635 + IAI46_03605 0.65 +0.8 783,635 + IAI46_03605 0.65 +0.1 783,636 - IAI46_03605 0.65 -0.8 783,636 - IAI46_03605 0.65 -0.4 783,757 + IAI46_03605 0.80 +0.4 783,758 - IAI46_03605 0.80 -0.7 783,817 - IAI46_03605 0.88 +0.5 783,817 - IAI46_03605 0.88 +0.2 783,826 + IAI46_03605 0.89 +0.6 783,826 + IAI46_03605 0.89 +1.8 783,827 - IAI46_03605 0.89 -0.4 783,912 - -0.4 783,932 + +1.3 783,932 + -1.1 783,947 - +0.7 783,952 - -0.2 783,952 - -0.7
Or see this region's nucleotide sequence