Experiment: Cobalt chloride 80 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_01365 and IAI46_01370 are separated by 650 nucleotides IAI46_01370 and IAI46_01375 are separated by 72 nucleotides IAI46_01375 and IAI46_01380 are separated by 37 nucleotides IAI46_01380 and IAI46_01385 are separated by 196 nucleotides
IAI46_01365: IAI46_01365 - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase, at 298,406 to 299,995
_01365
IAI46_01370: IAI46_01370 - 16S ribosomal RNA, at 300,646 to 302,190
_01370
IAI46_01375: IAI46_01375 - tRNA-Ile, at 302,263 to 302,339
_01375
IAI46_01380: IAI46_01380 - tRNA-Ala, at 302,377 to 302,452
_01380
IAI46_01385: IAI46_01385 - 23S ribosomal RNA, at 302,649 to 305,586
_01385
Position (kb)
300
301
302
303 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 299.687 kb on + strand, within IAI46_01365 at 299.687 kb on + strand, within IAI46_01365 at 299.792 kb on + strand, within IAI46_01365 at 299.849 kb on + strand at 299.849 kb on + strand at 299.850 kb on - strand at 300.025 kb on + strand at 300.056 kb on - strand at 300.056 kb on - strand at 300.056 kb on - strand at 300.056 kb on - strand at 300.056 kb on - strand at 300.056 kb on - strand at 300.056 kb on - strand at 300.056 kb on - strand at 300.062 kb on + strand at 300.063 kb on - strand at 300.063 kb on - strand at 300.063 kb on - strand at 300.064 kb on + strand at 300.064 kb on + strand at 300.065 kb on - strand at 300.065 kb on - strand at 300.065 kb on - strand at 300.065 kb on - strand at 300.085 kb on - strand at 300.085 kb on - strand at 300.085 kb on - strand at 300.085 kb on - strand at 300.086 kb on + strand at 300.086 kb on + strand at 300.086 kb on + strand at 300.115 kb on - strand at 300.233 kb on + strand at 300.234 kb on - strand at 300.234 kb on - strand at 300.235 kb on + strand at 300.235 kb on + strand at 300.236 kb on - strand at 300.286 kb on + strand at 300.287 kb on - strand at 300.315 kb on - strand at 300.317 kb on - strand at 300.317 kb on - strand at 300.317 kb on - strand at 300.317 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 80 uM, aerobic remove 299,687 + IAI46_01365 0.81 -2.0 299,687 + IAI46_01365 0.81 -3.4 299,792 + IAI46_01365 0.87 -2.4 299,849 + -1.4 299,849 + -2.1 299,850 - -0.2 300,025 + -0.2 300,056 - +0.5 300,056 - +0.3 300,056 - +0.3 300,056 - +0.2 300,056 - -0.2 300,056 - +0.5 300,056 - +0.5 300,056 - +0.4 300,062 + -3.1 300,063 - +0.5 300,063 - -0.6 300,063 - -0.6 300,064 + -0.9 300,064 + -1.4 300,065 - -0.5 300,065 - +1.3 300,065 - -1.0 300,065 - +0.2 300,085 - -0.2 300,085 - +0.7 300,085 - -0.1 300,085 - +0.4 300,086 + -0.4 300,086 + -2.0 300,086 + -1.8 300,115 - -0.3 300,233 + +0.8 300,234 - +0.1 300,234 - +1.3 300,235 + -0.2 300,235 + -0.5 300,236 - -1.8 300,286 + +0.5 300,287 - +0.5 300,315 - +0.1 300,317 - +1.6 300,317 - +0.8 300,317 - -0.4 300,317 - -0.3
Or see this region's nucleotide sequence