Experiment: Cobalt chloride 80 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_00710 and IAI46_00715 are separated by 58 nucleotides IAI46_00715 and IAI46_00720 overlap by 4 nucleotides IAI46_00720 and IAI46_00725 overlap by 4 nucleotides IAI46_00725 and IAI46_00730 overlap by 1 nucleotides
IAI46_00710: IAI46_00710 - lipoprotein, at 163,817 to 164,029
_00710
IAI46_00715: IAI46_00715 - diaminopimelate epimerase, at 164,088 to 164,912
_00715
IAI46_00720: IAI46_00720 - DUF484 domain-containing protein, at 164,909 to 165,613
_00720
IAI46_00725: IAI46_00725 - tyrosine recombinase XerC, at 165,610 to 166,521
_00725
IAI46_00730: IAI46_00730 - 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB, at 166,521 to 167,237
_00730
Position (kb) 164
165
166 Strain fitness (log2 ratio) -1
0
1
2 at 163.931 kb on - strand, within IAI46_00710 at 164.027 kb on + strand at 164.027 kb on + strand at 164.082 kb on + strand at 164.900 kb on + strand at 164.908 kb on + strand at 164.908 kb on + strand at 165.057 kb on + strand, within IAI46_00720 at 165.091 kb on + strand, within IAI46_00720 at 165.091 kb on + strand, within IAI46_00720 at 165.126 kb on + strand, within IAI46_00720 at 165.217 kb on + strand, within IAI46_00720 at 165.217 kb on + strand, within IAI46_00720 at 165.217 kb on + strand, within IAI46_00720 at 165.357 kb on + strand, within IAI46_00720 at 165.527 kb on + strand, within IAI46_00720 at 165.527 kb on + strand, within IAI46_00720 at 165.528 kb on - strand, within IAI46_00720 at 165.556 kb on + strand at 165.557 kb on - strand at 166.032 kb on + strand, within IAI46_00725 at 166.033 kb on - strand, within IAI46_00725 at 166.049 kb on - strand, within IAI46_00725 at 166.049 kb on - strand, within IAI46_00725 at 166.369 kb on - strand, within IAI46_00725 at 166.369 kb on - strand, within IAI46_00725 at 166.369 kb on - strand, within IAI46_00725 at 166.444 kb on + strand at 166.445 kb on - strand at 166.480 kb on + strand at 166.530 kb on + strand at 166.531 kb on - strand at 166.584 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 80 uM, aerobic remove 163,931 - IAI46_00710 0.54 -0.7 164,027 + +0.3 164,027 + -0.0 164,082 + -0.7 164,900 + +0.5 164,908 + -0.6 164,908 + +0.4 165,057 + IAI46_00720 0.21 -1.0 165,091 + IAI46_00720 0.26 +0.7 165,091 + IAI46_00720 0.26 -0.2 165,126 + IAI46_00720 0.31 +0.9 165,217 + IAI46_00720 0.44 -0.1 165,217 + IAI46_00720 0.44 -0.4 165,217 + IAI46_00720 0.44 +0.8 165,357 + IAI46_00720 0.64 +0.4 165,527 + IAI46_00720 0.88 +0.3 165,527 + IAI46_00720 0.88 +1.7 165,528 - IAI46_00720 0.88 +0.7 165,556 + -0.5 165,557 - -0.6 166,032 + IAI46_00725 0.46 -1.1 166,033 - IAI46_00725 0.46 +0.7 166,049 - IAI46_00725 0.48 +0.1 166,049 - IAI46_00725 0.48 -0.6 166,369 - IAI46_00725 0.83 -0.1 166,369 - IAI46_00725 0.83 -1.3 166,369 - IAI46_00725 0.83 +0.4 166,444 + -0.5 166,445 - +0.1 166,480 + -1.2 166,530 + -0.9 166,531 - +0.6 166,584 + +2.1
Or see this region's nucleotide sequence