Experiment: m.b. Thallium(I) acetate 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1511 and Echvi_1512 are separated by 26 nucleotides Echvi_1512 and Echvi_1513 are separated by 271 nucleotides Echvi_1513 and Echvi_1514 are separated by 238 nucleotides Echvi_1514 and Echvi_1515 are separated by 84 nucleotides
Echvi_1511: Echvi_1511 - 5,10-methenyltetrahydrofolate synthetase, at 1,735,137 to 1,735,757
_1511
Echvi_1512: Echvi_1512 - hypothetical protein, at 1,735,784 to 1,736,269
_1512
Echvi_1513: Echvi_1513 - Sugar phosphate isomerases/epimerases, at 1,736,541 to 1,737,665
_1513
Echvi_1514: Echvi_1514 - hypothetical protein, at 1,737,904 to 1,738,152
_1514
Echvi_1515: Echvi_1515 - hypothetical protein, at 1,738,237 to 1,739,307
_1515
Position (kb)
1736
1737
1738 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1735.590 kb on - strand, within Echvi_1511 at 1735.590 kb on - strand, within Echvi_1511 at 1735.624 kb on + strand, within Echvi_1511 at 1735.649 kb on + strand, within Echvi_1511 at 1735.666 kb on - strand, within Echvi_1511 at 1735.666 kb on - strand, within Echvi_1511 at 1735.719 kb on - strand at 1735.725 kb on - strand at 1735.756 kb on - strand at 1735.781 kb on - strand at 1735.781 kb on - strand at 1735.781 kb on - strand at 1735.781 kb on - strand at 1735.783 kb on + strand at 1735.783 kb on + strand at 1735.784 kb on - strand at 1735.789 kb on + strand at 1735.801 kb on + strand at 1735.804 kb on + strand at 1735.859 kb on + strand, within Echvi_1512 at 1735.904 kb on - strand, within Echvi_1512 at 1735.919 kb on - strand, within Echvi_1512 at 1735.947 kb on + strand, within Echvi_1512 at 1735.948 kb on - strand, within Echvi_1512 at 1735.999 kb on + strand, within Echvi_1512 at 1736.000 kb on - strand, within Echvi_1512 at 1736.027 kb on - strand, within Echvi_1512 at 1736.036 kb on + strand, within Echvi_1512 at 1736.037 kb on - strand, within Echvi_1512 at 1736.096 kb on + strand, within Echvi_1512 at 1736.096 kb on + strand, within Echvi_1512 at 1736.097 kb on - strand, within Echvi_1512 at 1736.097 kb on - strand, within Echvi_1512 at 1736.097 kb on - strand, within Echvi_1512 at 1736.097 kb on - strand, within Echvi_1512 at 1736.108 kb on + strand, within Echvi_1512 at 1736.108 kb on + strand, within Echvi_1512 at 1736.108 kb on + strand, within Echvi_1512 at 1736.109 kb on - strand, within Echvi_1512 at 1736.109 kb on - strand, within Echvi_1512 at 1736.109 kb on - strand, within Echvi_1512 at 1736.109 kb on - strand, within Echvi_1512 at 1736.109 kb on - strand, within Echvi_1512 at 1736.187 kb on - strand, within Echvi_1512 at 1736.187 kb on - strand, within Echvi_1512 at 1736.188 kb on + strand, within Echvi_1512 at 1736.188 kb on + strand, within Echvi_1512 at 1736.189 kb on - strand, within Echvi_1512 at 1736.217 kb on + strand, within Echvi_1512 at 1736.218 kb on - strand, within Echvi_1512 at 1736.257 kb on + strand at 1736.304 kb on + strand at 1736.305 kb on - strand at 1736.305 kb on - strand at 1736.305 kb on - strand at 1736.318 kb on + strand at 1736.384 kb on + strand at 1736.385 kb on - strand at 1736.452 kb on + strand at 1736.453 kb on - strand at 1736.484 kb on + strand at 1736.485 kb on - strand at 1736.485 kb on - strand at 1736.485 kb on - strand at 1736.508 kb on + strand at 1736.508 kb on + strand at 1736.508 kb on + strand at 1736.508 kb on + strand at 1736.509 kb on - strand at 1736.509 kb on - strand at 1736.509 kb on - strand at 1736.509 kb on - strand at 1736.509 kb on - strand at 1736.526 kb on + strand at 1736.647 kb on + strand at 1736.648 kb on - strand at 1736.692 kb on + strand, within Echvi_1513 at 1736.745 kb on - strand, within Echvi_1513 at 1736.907 kb on + strand, within Echvi_1513 at 1736.909 kb on + strand, within Echvi_1513 at 1736.910 kb on - strand, within Echvi_1513 at 1736.961 kb on + strand, within Echvi_1513 at 1736.972 kb on - strand, within Echvi_1513 at 1737.004 kb on + strand, within Echvi_1513 at 1737.004 kb on + strand, within Echvi_1513 at 1737.005 kb on - strand, within Echvi_1513 at 1737.062 kb on + strand, within Echvi_1513 at 1737.063 kb on - strand, within Echvi_1513 at 1737.074 kb on + strand, within Echvi_1513 at 1737.074 kb on + strand, within Echvi_1513 at 1737.091 kb on + strand, within Echvi_1513 at 1737.114 kb on + strand, within Echvi_1513 at 1737.114 kb on + strand, within Echvi_1513 at 1737.114 kb on + strand, within Echvi_1513 at 1737.115 kb on - strand, within Echvi_1513 at 1737.150 kb on + strand, within Echvi_1513 at 1737.150 kb on + strand, within Echvi_1513 at 1737.150 kb on + strand, within Echvi_1513 at 1737.151 kb on - strand, within Echvi_1513 at 1737.151 kb on - strand, within Echvi_1513 at 1737.151 kb on - strand, within Echvi_1513 at 1737.180 kb on - strand, within Echvi_1513 at 1737.180 kb on - strand, within Echvi_1513 at 1737.196 kb on + strand, within Echvi_1513 at 1737.255 kb on - strand, within Echvi_1513 at 1737.278 kb on + strand, within Echvi_1513 at 1737.278 kb on + strand, within Echvi_1513 at 1737.278 kb on + strand, within Echvi_1513 at 1737.278 kb on + strand, within Echvi_1513 at 1737.279 kb on - strand, within Echvi_1513 at 1737.282 kb on + strand, within Echvi_1513 at 1737.282 kb on + strand, within Echvi_1513 at 1737.298 kb on + strand, within Echvi_1513 at 1737.299 kb on - strand, within Echvi_1513 at 1737.302 kb on + strand, within Echvi_1513 at 1737.363 kb on + strand, within Echvi_1513 at 1737.501 kb on - strand, within Echvi_1513 at 1737.501 kb on - strand, within Echvi_1513 at 1737.524 kb on + strand, within Echvi_1513 at 1737.524 kb on + strand, within Echvi_1513 at 1737.525 kb on - strand, within Echvi_1513 at 1737.539 kb on - strand, within Echvi_1513 at 1737.586 kb on - strand at 1737.602 kb on + strand at 1737.632 kb on + strand at 1737.633 kb on - strand at 1737.668 kb on + strand at 1737.669 kb on - strand at 1737.673 kb on - strand at 1737.712 kb on - strand at 1737.797 kb on - strand at 1737.798 kb on + strand at 1737.799 kb on - strand at 1737.799 kb on - strand at 1737.799 kb on - strand at 1737.799 kb on - strand at 1737.819 kb on + strand at 1737.819 kb on + strand at 1737.820 kb on - strand at 1737.821 kb on + strand at 1737.869 kb on - strand at 1737.900 kb on + strand at 1737.900 kb on + strand at 1737.988 kb on - strand, within Echvi_1514 at 1738.020 kb on + strand, within Echvi_1514 at 1738.020 kb on + strand, within Echvi_1514 at 1738.020 kb on + strand, within Echvi_1514 at 1738.021 kb on - strand, within Echvi_1514 at 1738.021 kb on - strand, within Echvi_1514 at 1738.021 kb on - strand, within Echvi_1514 at 1738.021 kb on - strand, within Echvi_1514 at 1738.076 kb on + strand, within Echvi_1514 at 1738.084 kb on - strand, within Echvi_1514 at 1738.084 kb on - strand, within Echvi_1514 at 1738.117 kb on + strand, within Echvi_1514 at 1738.117 kb on + strand, within Echvi_1514 at 1738.117 kb on + strand, within Echvi_1514 at 1738.150 kb on + strand at 1738.172 kb on - strand at 1738.181 kb on - strand at 1738.188 kb on - strand at 1738.188 kb on - strand at 1738.189 kb on + strand at 1738.189 kb on + strand at 1738.190 kb on - strand at 1738.195 kb on + strand at 1738.196 kb on - strand at 1738.230 kb on - strand at 1738.230 kb on - strand at 1738.230 kb on - strand at 1738.237 kb on - strand at 1738.248 kb on + strand at 1738.248 kb on + strand at 1738.249 kb on - strand at 1738.249 kb on - strand at 1738.249 kb on - strand at 1738.249 kb on - strand at 1738.259 kb on + strand at 1738.259 kb on + strand at 1738.259 kb on + strand at 1738.260 kb on - strand at 1738.260 kb on - strand at 1738.284 kb on - strand at 1738.308 kb on + strand at 1738.319 kb on + strand at 1738.320 kb on - strand at 1738.320 kb on - strand at 1738.362 kb on + strand, within Echvi_1515 at 1738.363 kb on - strand, within Echvi_1515 at 1738.372 kb on - strand, within Echvi_1515 at 1738.403 kb on + strand, within Echvi_1515 at 1738.403 kb on + strand, within Echvi_1515 at 1738.407 kb on + strand, within Echvi_1515 at 1738.407 kb on + strand, within Echvi_1515 at 1738.407 kb on + strand, within Echvi_1515 at 1738.407 kb on + strand, within Echvi_1515 at 1738.407 kb on + strand, within Echvi_1515 at 1738.408 kb on - strand, within Echvi_1515 at 1738.408 kb on - strand, within Echvi_1515 at 1738.408 kb on - strand, within Echvi_1515 at 1738.408 kb on - strand, within Echvi_1515 at 1738.408 kb on - strand, within Echvi_1515 at 1738.408 kb on - strand, within Echvi_1515 at 1738.408 kb on - strand, within Echvi_1515 at 1738.408 kb on - strand, within Echvi_1515 at 1738.408 kb on - strand, within Echvi_1515 at 1738.411 kb on + strand, within Echvi_1515 at 1738.412 kb on - strand, within Echvi_1515 at 1738.479 kb on - strand, within Echvi_1515 at 1738.503 kb on + strand, within Echvi_1515 at 1738.504 kb on - strand, within Echvi_1515 at 1738.504 kb on - strand, within Echvi_1515 at 1738.504 kb on - strand, within Echvi_1515 at 1738.504 kb on - strand, within Echvi_1515 at 1738.518 kb on - strand, within Echvi_1515 at 1738.522 kb on - strand, within Echvi_1515 at 1738.524 kb on - strand, within Echvi_1515 at 1738.524 kb on - strand, within Echvi_1515 at 1738.598 kb on + strand, within Echvi_1515 at 1738.599 kb on - strand, within Echvi_1515 at 1738.607 kb on - strand, within Echvi_1515 at 1738.607 kb on - strand, within Echvi_1515 at 1738.608 kb on + strand, within Echvi_1515 at 1738.614 kb on + strand, within Echvi_1515 at 1738.614 kb on + strand, within Echvi_1515 at 1738.614 kb on + strand, within Echvi_1515 at 1738.614 kb on + strand, within Echvi_1515 at 1738.614 kb on + strand, within Echvi_1515 at 1738.615 kb on - strand, within Echvi_1515 at 1738.615 kb on - strand, within Echvi_1515 at 1738.615 kb on - strand, within Echvi_1515 at 1738.621 kb on + strand, within Echvi_1515 at 1738.622 kb on - strand, within Echvi_1515 at 1738.622 kb on - strand, within Echvi_1515
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.025 mg/ml remove 1,735,590 - Echvi_1511 0.73 +0.7 1,735,590 - Echvi_1511 0.73 -0.0 1,735,624 + Echvi_1511 0.78 -0.2 1,735,649 + Echvi_1511 0.82 -0.9 1,735,666 - Echvi_1511 0.85 -0.3 1,735,666 - Echvi_1511 0.85 -0.5 1,735,719 - +0.9 1,735,725 - -0.7 1,735,756 - +0.4 1,735,781 - -0.8 1,735,781 - +0.4 1,735,781 - +0.2 1,735,781 - -0.5 1,735,783 + -0.8 1,735,783 + -2.5 1,735,784 - -0.4 1,735,789 + +0.3 1,735,801 + -0.5 1,735,804 + -0.8 1,735,859 + Echvi_1512 0.15 -0.1 1,735,904 - Echvi_1512 0.25 -0.5 1,735,919 - Echvi_1512 0.28 -0.6 1,735,947 + Echvi_1512 0.34 +1.3 1,735,948 - Echvi_1512 0.34 -0.2 1,735,999 + Echvi_1512 0.44 -0.3 1,736,000 - Echvi_1512 0.44 +0.4 1,736,027 - Echvi_1512 0.50 +0.1 1,736,036 + Echvi_1512 0.52 -0.6 1,736,037 - Echvi_1512 0.52 +0.3 1,736,096 + Echvi_1512 0.64 -1.1 1,736,096 + Echvi_1512 0.64 +0.9 1,736,097 - Echvi_1512 0.64 -1.4 1,736,097 - Echvi_1512 0.64 -0.1 1,736,097 - Echvi_1512 0.64 -0.4 1,736,097 - Echvi_1512 0.64 -0.2 1,736,108 + Echvi_1512 0.67 -0.9 1,736,108 + Echvi_1512 0.67 -0.8 1,736,108 + Echvi_1512 0.67 -1.4 1,736,109 - Echvi_1512 0.67 -0.1 1,736,109 - Echvi_1512 0.67 +0.3 1,736,109 - Echvi_1512 0.67 -0.6 1,736,109 - Echvi_1512 0.67 -0.2 1,736,109 - Echvi_1512 0.67 -0.1 1,736,187 - Echvi_1512 0.83 -0.3 1,736,187 - Echvi_1512 0.83 -1.5 1,736,188 + Echvi_1512 0.83 +1.4 1,736,188 + Echvi_1512 0.83 +0.1 1,736,189 - Echvi_1512 0.83 -1.1 1,736,217 + Echvi_1512 0.89 -0.8 1,736,218 - Echvi_1512 0.89 -0.6 1,736,257 + +1.2 1,736,304 + -0.2 1,736,305 - -1.1 1,736,305 - +0.4 1,736,305 - +0.6 1,736,318 + +0.6 1,736,384 + +0.3 1,736,385 - +0.6 1,736,452 + -0.4 1,736,453 - -0.2 1,736,484 + +0.7 1,736,485 - -0.0 1,736,485 - -1.9 1,736,485 - +0.4 1,736,508 + -0.3 1,736,508 + +1.4 1,736,508 + +0.5 1,736,508 + -1.8 1,736,509 - +1.4 1,736,509 - +0.6 1,736,509 - +0.3 1,736,509 - -1.5 1,736,509 - +0.4 1,736,526 + +0.5 1,736,647 + -1.3 1,736,648 - -0.7 1,736,692 + Echvi_1513 0.13 -1.1 1,736,745 - Echvi_1513 0.18 -1.1 1,736,907 + Echvi_1513 0.33 +0.1 1,736,909 + Echvi_1513 0.33 +0.3 1,736,910 - Echvi_1513 0.33 -0.5 1,736,961 + Echvi_1513 0.37 -2.3 1,736,972 - Echvi_1513 0.38 +0.5 1,737,004 + Echvi_1513 0.41 -1.7 1,737,004 + Echvi_1513 0.41 +0.4 1,737,005 - Echvi_1513 0.41 +0.9 1,737,062 + Echvi_1513 0.46 +0.5 1,737,063 - Echvi_1513 0.46 +0.2 1,737,074 + Echvi_1513 0.47 +0.0 1,737,074 + Echvi_1513 0.47 -0.8 1,737,091 + Echvi_1513 0.49 -1.1 1,737,114 + Echvi_1513 0.51 -1.0 1,737,114 + Echvi_1513 0.51 +0.1 1,737,114 + Echvi_1513 0.51 -0.6 1,737,115 - Echvi_1513 0.51 -1.0 1,737,150 + Echvi_1513 0.54 -0.5 1,737,150 + Echvi_1513 0.54 -0.5 1,737,150 + Echvi_1513 0.54 -0.1 1,737,151 - Echvi_1513 0.54 -1.1 1,737,151 - Echvi_1513 0.54 +0.9 1,737,151 - Echvi_1513 0.54 +0.2 1,737,180 - Echvi_1513 0.57 -1.8 1,737,180 - Echvi_1513 0.57 +1.1 1,737,196 + Echvi_1513 0.58 -2.6 1,737,255 - Echvi_1513 0.63 -1.4 1,737,278 + Echvi_1513 0.66 -0.1 1,737,278 + Echvi_1513 0.66 +0.3 1,737,278 + Echvi_1513 0.66 +0.3 1,737,278 + Echvi_1513 0.66 +0.7 1,737,279 - Echvi_1513 0.66 -0.8 1,737,282 + Echvi_1513 0.66 -0.2 1,737,282 + Echvi_1513 0.66 -0.5 1,737,298 + Echvi_1513 0.67 -0.2 1,737,299 - Echvi_1513 0.67 -0.2 1,737,302 + Echvi_1513 0.68 +0.0 1,737,363 + Echvi_1513 0.73 -0.5 1,737,501 - Echvi_1513 0.85 -0.5 1,737,501 - Echvi_1513 0.85 -0.5 1,737,524 + Echvi_1513 0.87 +0.4 1,737,524 + Echvi_1513 0.87 -0.1 1,737,525 - Echvi_1513 0.87 -0.1 1,737,539 - Echvi_1513 0.89 +0.1 1,737,586 - +1.5 1,737,602 + +0.0 1,737,632 + +0.6 1,737,633 - -1.2 1,737,668 + -0.7 1,737,669 - +0.0 1,737,673 - -1.1 1,737,712 - -0.9 1,737,797 - -2.5 1,737,798 + +1.2 1,737,799 - +0.4 1,737,799 - +0.8 1,737,799 - -1.0 1,737,799 - +1.6 1,737,819 + +0.3 1,737,819 + +0.2 1,737,820 - -0.7 1,737,821 + +0.4 1,737,869 - -3.1 1,737,900 + -0.3 1,737,900 + +0.6 1,737,988 - Echvi_1514 0.34 +0.5 1,738,020 + Echvi_1514 0.47 +1.0 1,738,020 + Echvi_1514 0.47 +0.9 1,738,020 + Echvi_1514 0.47 -1.2 1,738,021 - Echvi_1514 0.47 -0.4 1,738,021 - Echvi_1514 0.47 +1.4 1,738,021 - Echvi_1514 0.47 -0.2 1,738,021 - Echvi_1514 0.47 -0.3 1,738,076 + Echvi_1514 0.69 +0.3 1,738,084 - Echvi_1514 0.72 +0.4 1,738,084 - Echvi_1514 0.72 -0.1 1,738,117 + Echvi_1514 0.86 -1.0 1,738,117 + Echvi_1514 0.86 +0.4 1,738,117 + Echvi_1514 0.86 +0.1 1,738,150 + -0.3 1,738,172 - +0.1 1,738,181 - +1.0 1,738,188 - +0.3 1,738,188 - -0.5 1,738,189 + +0.1 1,738,189 + +0.1 1,738,190 - -0.1 1,738,195 + +0.1 1,738,196 - -0.6 1,738,230 - +1.0 1,738,230 - -0.2 1,738,230 - -0.2 1,738,237 - -1.1 1,738,248 + +0.2 1,738,248 + -0.1 1,738,249 - +0.6 1,738,249 - +1.2 1,738,249 - +0.0 1,738,249 - -0.4 1,738,259 + +0.4 1,738,259 + -0.9 1,738,259 + +0.4 1,738,260 - -0.5 1,738,260 - +0.2 1,738,284 - -0.3 1,738,308 + -0.6 1,738,319 + -0.5 1,738,320 - -0.5 1,738,320 - +0.8 1,738,362 + Echvi_1515 0.12 +0.1 1,738,363 - Echvi_1515 0.12 -0.3 1,738,372 - Echvi_1515 0.13 -0.8 1,738,403 + Echvi_1515 0.15 -0.2 1,738,403 + Echvi_1515 0.15 +0.3 1,738,407 + Echvi_1515 0.16 -0.5 1,738,407 + Echvi_1515 0.16 -1.9 1,738,407 + Echvi_1515 0.16 -0.6 1,738,407 + Echvi_1515 0.16 +0.2 1,738,407 + Echvi_1515 0.16 -1.3 1,738,408 - Echvi_1515 0.16 +0.8 1,738,408 - Echvi_1515 0.16 +0.7 1,738,408 - Echvi_1515 0.16 -0.3 1,738,408 - Echvi_1515 0.16 +0.7 1,738,408 - Echvi_1515 0.16 +1.1 1,738,408 - Echvi_1515 0.16 +0.2 1,738,408 - Echvi_1515 0.16 -1.2 1,738,408 - Echvi_1515 0.16 -0.3 1,738,408 - Echvi_1515 0.16 +0.7 1,738,411 + Echvi_1515 0.16 -0.4 1,738,412 - Echvi_1515 0.16 +0.0 1,738,479 - Echvi_1515 0.23 -0.7 1,738,503 + Echvi_1515 0.25 -0.8 1,738,504 - Echvi_1515 0.25 +0.4 1,738,504 - Echvi_1515 0.25 -0.7 1,738,504 - Echvi_1515 0.25 +0.3 1,738,504 - Echvi_1515 0.25 +0.9 1,738,518 - Echvi_1515 0.26 +0.9 1,738,522 - Echvi_1515 0.27 +0.4 1,738,524 - Echvi_1515 0.27 -0.0 1,738,524 - Echvi_1515 0.27 +2.1 1,738,598 + Echvi_1515 0.34 +0.9 1,738,599 - Echvi_1515 0.34 -1.0 1,738,607 - Echvi_1515 0.35 -0.1 1,738,607 - Echvi_1515 0.35 -0.9 1,738,608 + Echvi_1515 0.35 +0.7 1,738,614 + Echvi_1515 0.35 +0.3 1,738,614 + Echvi_1515 0.35 +0.1 1,738,614 + Echvi_1515 0.35 -0.4 1,738,614 + Echvi_1515 0.35 -0.4 1,738,614 + Echvi_1515 0.35 +0.6 1,738,615 - Echvi_1515 0.35 +0.2 1,738,615 - Echvi_1515 0.35 -0.6 1,738,615 - Echvi_1515 0.35 -0.2 1,738,621 + Echvi_1515 0.36 -0.8 1,738,622 - Echvi_1515 0.36 -1.8 1,738,622 - Echvi_1515 0.36 +0.9
Or see this region's nucleotide sequence