Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0732

Experiment: m.b. Thallium(I) acetate 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEchvi_0731 and Echvi_0732 are separated by 216 nucleotidesEchvi_0732 and Echvi_0733 are separated by 54 nucleotides Echvi_0731: Echvi_0731 - Fe-S oxidoreductase, at 818,650 to 819,444 _0731 Echvi_0732: Echvi_0732 - hypothetical protein, at 819,661 to 820,149 _0732 Echvi_0733: Echvi_0733 - Outer membrane protein and related peptidoglycan-associated (lipo)proteins, at 820,204 to 822,126 _0733 Position (kb) 819 820 821Strain fitness (log2 ratio) -3 -2 -1 0 1at 819.457 kb on - strandat 819.457 kb on - strandat 819.473 kb on + strandat 819.534 kb on + strandat 819.534 kb on + strandat 819.534 kb on + strandat 819.587 kb on - strandat 819.587 kb on - strandat 819.625 kb on - strandat 819.626 kb on + strandat 819.627 kb on - strandat 819.630 kb on + strandat 819.660 kb on + strandat 819.660 kb on + strandat 819.664 kb on + strandat 819.664 kb on + strandat 819.664 kb on + strandat 819.664 kb on + strandat 819.664 kb on + strandat 819.664 kb on + strandat 819.664 kb on + strandat 819.664 kb on + strandat 819.664 kb on + strandat 819.664 kb on + strandat 819.665 kb on - strandat 819.665 kb on - strandat 819.665 kb on - strandat 819.666 kb on + strandat 819.707 kb on + strandat 819.707 kb on + strandat 819.708 kb on - strandat 819.708 kb on - strandat 819.708 kb on - strandat 819.708 kb on - strandat 819.709 kb on + strandat 819.709 kb on + strandat 819.709 kb on + strandat 819.709 kb on + strandat 819.751 kb on - strand, within Echvi_0732at 820.018 kb on + strand, within Echvi_0732at 820.019 kb on - strand, within Echvi_0732at 820.060 kb on - strand, within Echvi_0732at 820.104 kb on - strandat 820.148 kb on - strandat 820.165 kb on + strandat 820.167 kb on + strandat 820.167 kb on + strandat 820.167 kb on + strandat 820.167 kb on + strandat 820.167 kb on + strandat 820.170 kb on + strandat 820.170 kb on + strandat 820.179 kb on + strandat 820.179 kb on + strandat 820.179 kb on + strandat 820.179 kb on + strandat 820.183 kb on + strandat 820.183 kb on + strandat 820.185 kb on + strandat 820.203 kb on + strandat 820.204 kb on - strandat 820.237 kb on - strandat 820.254 kb on - strandat 820.260 kb on + strandat 820.260 kb on + strandat 820.307 kb on - strandat 820.337 kb on + strandat 820.337 kb on + strandat 820.372 kb on + strandat 820.372 kb on + strandat 820.372 kb on + strandat 820.372 kb on + strandat 820.373 kb on - strandat 820.373 kb on - strandat 820.376 kb on - strandat 820.376 kb on - strandat 820.426 kb on + strand, within Echvi_0733at 820.427 kb on - strand, within Echvi_0733at 820.429 kb on + strand, within Echvi_0733at 820.430 kb on - strand, within Echvi_0733at 820.430 kb on - strand, within Echvi_0733at 820.430 kb on - strand, within Echvi_0733at 820.430 kb on - strand, within Echvi_0733at 820.435 kb on - strand, within Echvi_0733at 820.435 kb on - strand, within Echvi_0733at 820.435 kb on - strand, within Echvi_0733at 820.435 kb on - strand, within Echvi_0733at 820.507 kb on + strand, within Echvi_0733at 820.508 kb on - strand, within Echvi_0733at 820.528 kb on + strand, within Echvi_0733at 820.528 kb on + strand, within Echvi_0733at 820.548 kb on + strand, within Echvi_0733at 820.548 kb on + strand, within Echvi_0733at 820.548 kb on + strand, within Echvi_0733at 820.549 kb on - strand, within Echvi_0733at 820.549 kb on - strand, within Echvi_0733at 820.549 kb on - strand, within Echvi_0733at 820.634 kb on - strand, within Echvi_0733at 820.652 kb on - strand, within Echvi_0733at 820.681 kb on + strand, within Echvi_0733at 820.681 kb on + strand, within Echvi_0733at 820.682 kb on - strand, within Echvi_0733at 820.682 kb on - strand, within Echvi_0733at 820.682 kb on - strand, within Echvi_0733at 820.766 kb on - strand, within Echvi_0733at 820.806 kb on - strand, within Echvi_0733at 820.806 kb on - strand, within Echvi_0733at 820.812 kb on - strand, within Echvi_0733at 820.820 kb on + strand, within Echvi_0733at 820.820 kb on + strand, within Echvi_0733at 820.821 kb on - strand, within Echvi_0733at 820.821 kb on - strand, within Echvi_0733at 820.821 kb on - strand, within Echvi_0733at 820.893 kb on + strand, within Echvi_0733at 820.894 kb on - strand, within Echvi_0733at 820.894 kb on - strand, within Echvi_0733at 820.894 kb on - strand, within Echvi_0733at 820.903 kb on + strand, within Echvi_0733at 820.903 kb on + strand, within Echvi_0733at 820.903 kb on + strand, within Echvi_0733at 820.903 kb on + strand, within Echvi_0733at 820.904 kb on - strand, within Echvi_0733at 820.952 kb on + strand, within Echvi_0733at 820.953 kb on - strand, within Echvi_0733at 820.964 kb on - strand, within Echvi_0733at 820.992 kb on + strand, within Echvi_0733at 821.006 kb on + strand, within Echvi_0733at 821.024 kb on - strand, within Echvi_0733at 821.096 kb on - strand, within Echvi_0733at 821.113 kb on + strand, within Echvi_0733at 821.114 kb on - strand, within Echvi_0733at 821.114 kb on - strand, within Echvi_0733at 821.114 kb on - strand, within Echvi_0733at 821.114 kb on - strand, within Echvi_0733at 821.114 kb on - strand, within Echvi_0733

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.025 mg/ml
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819,457 - -0.1
819,457 - +1.6
819,473 + -1.9
819,534 + -2.3
819,534 + -0.1
819,534 + +0.8
819,587 - -2.0
819,587 - -2.0
819,625 - -1.2
819,626 + -1.7
819,627 - -2.3
819,630 + +0.4
819,660 + +0.2
819,660 + -2.7
819,664 + -0.6
819,664 + -1.3
819,664 + -2.6
819,664 + -1.5
819,664 + -0.2
819,664 + -1.8
819,664 + -2.9
819,664 + -2.0
819,664 + -1.8
819,664 + +0.1
819,665 - -2.6
819,665 - -1.0
819,665 - -1.1
819,666 + -2.4
819,707 + -1.0
819,707 + -0.8
819,708 - -1.4
819,708 - -2.9
819,708 - -0.9
819,708 - -2.1
819,709 + -0.0
819,709 + -1.0
819,709 + -1.4
819,709 + -1.1
819,751 - Echvi_0732 0.18 -1.8
820,018 + Echvi_0732 0.73 -2.9
820,019 - Echvi_0732 0.73 -1.3
820,060 - Echvi_0732 0.82 -1.0
820,104 - -2.8
820,148 - +1.1
820,165 + +0.1
820,167 + +0.7
820,167 + +0.1
820,167 + +1.0
820,167 + -0.1
820,167 + +0.0
820,170 + -0.1
820,170 + -0.2
820,179 + +0.2
820,179 + -1.4
820,179 + +0.5
820,179 + +0.6
820,183 + +0.5
820,183 + +0.4
820,185 + -0.4
820,203 + +0.7
820,204 - +0.3
820,237 - +0.5
820,254 - +0.3
820,260 + +0.4
820,260 + -0.0
820,307 - +0.6
820,337 + +0.8
820,337 + +0.7
820,372 + +0.8
820,372 + +0.4
820,372 + +0.3
820,372 + -0.3
820,373 - -0.6
820,373 - +0.3
820,376 - -0.6
820,376 - +0.5
820,426 + Echvi_0733 0.12 +0.8
820,427 - Echvi_0733 0.12 +0.4
820,429 + Echvi_0733 0.12 +0.1
820,430 - Echvi_0733 0.12 +0.3
820,430 - Echvi_0733 0.12 +0.3
820,430 - Echvi_0733 0.12 +0.2
820,430 - Echvi_0733 0.12 -0.4
820,435 - Echvi_0733 0.12 +0.1
820,435 - Echvi_0733 0.12 +1.2
820,435 - Echvi_0733 0.12 -0.1
820,435 - Echvi_0733 0.12 +0.1
820,507 + Echvi_0733 0.16 +0.1
820,508 - Echvi_0733 0.16 +1.0
820,528 + Echvi_0733 0.17 +0.4
820,528 + Echvi_0733 0.17 -0.2
820,548 + Echvi_0733 0.18 +1.2
820,548 + Echvi_0733 0.18 +0.1
820,548 + Echvi_0733 0.18 -0.7
820,549 - Echvi_0733 0.18 +0.8
820,549 - Echvi_0733 0.18 -1.0
820,549 - Echvi_0733 0.18 -0.4
820,634 - Echvi_0733 0.22 +0.4
820,652 - Echvi_0733 0.23 +0.5
820,681 + Echvi_0733 0.25 -0.5
820,681 + Echvi_0733 0.25 -1.0
820,682 - Echvi_0733 0.25 +1.1
820,682 - Echvi_0733 0.25 +0.9
820,682 - Echvi_0733 0.25 +1.1
820,766 - Echvi_0733 0.29 +0.8
820,806 - Echvi_0733 0.31 +0.8
820,806 - Echvi_0733 0.31 +1.3
820,812 - Echvi_0733 0.32 +0.3
820,820 + Echvi_0733 0.32 +0.4
820,820 + Echvi_0733 0.32 -0.1
820,821 - Echvi_0733 0.32 +1.0
820,821 - Echvi_0733 0.32 +0.3
820,821 - Echvi_0733 0.32 +0.1
820,893 + Echvi_0733 0.36 +0.7
820,894 - Echvi_0733 0.36 +0.9
820,894 - Echvi_0733 0.36 +0.6
820,894 - Echvi_0733 0.36 +0.3
820,903 + Echvi_0733 0.36 -0.2
820,903 + Echvi_0733 0.36 -1.0
820,903 + Echvi_0733 0.36 -1.0
820,903 + Echvi_0733 0.36 +0.4
820,904 - Echvi_0733 0.36 -0.0
820,952 + Echvi_0733 0.39 +1.1
820,953 - Echvi_0733 0.39 +0.3
820,964 - Echvi_0733 0.40 -0.0
820,992 + Echvi_0733 0.41 +0.4
821,006 + Echvi_0733 0.42 -1.4
821,024 - Echvi_0733 0.43 -0.6
821,096 - Echvi_0733 0.46 +0.4
821,113 + Echvi_0733 0.47 +0.0
821,114 - Echvi_0733 0.47 +0.1
821,114 - Echvi_0733 0.47 +0.2
821,114 - Echvi_0733 0.47 +0.7
821,114 - Echvi_0733 0.47 +0.6
821,114 - Echvi_0733 0.47 +0.7

Or see this region's nucleotide sequence