Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0650
Experiment: m.b. Thallium(I) acetate 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Thallium(I) acetate 0.025 mg/ml |
---|---|---|---|---|---|
remove | |||||
734,163 | - | -0.2 | |||
734,328 | + | -0.2 | |||
734,380 | + | -0.4 | |||
734,488 | - | Echvi_0650 | 0.40 | +1.6 | |
734,516 | + | Echvi_0650 | 0.49 | +0.7 | |
734,516 | + | Echvi_0650 | 0.49 | -2.7 | |
734,536 | + | Echvi_0650 | 0.56 | +0.2 | |
734,567 | + | Echvi_0650 | 0.66 | -0.1 | |
734,567 | + | Echvi_0650 | 0.66 | -1.9 | |
734,676 | - | +0.1 | |||
734,714 | - | +0.5 | |||
734,716 | + | -0.8 | |||
734,836 | + | -0.5 | |||
734,836 | + | +0.2 | |||
734,917 | + | +0.1 | |||
734,926 | + | -0.9 | |||
734,926 | + | +0.9 | |||
734,926 | + | +0.3 | |||
734,927 | - | +0.1 | |||
734,929 | + | +0.7 | |||
734,930 | - | +1.2 | |||
734,930 | - | -0.2 | |||
734,930 | - | +0.5 | |||
734,940 | + | +1.0 | |||
734,980 | + | -0.8 | |||
734,980 | + | -0.6 | |||
734,980 | + | -0.4 | |||
734,981 | - | +0.6 | |||
734,981 | - | -0.0 | |||
734,991 | - | +1.0 | |||
734,991 | - | +2.0 | |||
735,032 | + | -0.2 | |||
735,032 | + | -0.1 | |||
735,032 | + | +0.3 | |||
735,032 | + | -0.1 | |||
735,033 | - | +0.5 | |||
735,039 | + | -1.8 | |||
735,039 | + | -0.3 | |||
735,040 | - | +0.0 | |||
735,043 | + | -1.9 | |||
735,055 | + | -0.2 | |||
735,055 | + | -2.0 | |||
735,061 | - | -0.2 | |||
735,175 | + | +1.1 |
Or see this region's nucleotide sequence