Experiment: L-Fucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE41_RS15645 and ABIE41_RS15650 are separated by 275 nucleotides
ABIE41_RS15645: ABIE41_RS15645 - hypothetical protein, at 3,203,376 to 3,204,170
_RS15645
ABIE41_RS15650: ABIE41_RS15650 - methyltransferase domain-containing protein, at 3,204,446 to 3,205,084
_RS15650
Position (kb)
3203
3204
3205 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3202.446 kb on + strand at 3202.663 kb on + strand at 3202.691 kb on - strand at 3202.722 kb on - strand at 3202.822 kb on + strand at 3202.847 kb on - strand at 3202.847 kb on - strand at 3202.863 kb on + strand at 3202.989 kb on - strand at 3202.989 kb on - strand at 3202.989 kb on - strand at 3203.032 kb on - strand at 3203.038 kb on + strand at 3203.039 kb on - strand at 3203.066 kb on + strand at 3203.419 kb on + strand at 3203.699 kb on + strand, within ABIE41_RS15645 at 3203.935 kb on + strand, within ABIE41_RS15645 at 3203.935 kb on + strand, within ABIE41_RS15645 at 3203.935 kb on + strand, within ABIE41_RS15645 at 3203.935 kb on + strand, within ABIE41_RS15645 at 3203.936 kb on - strand, within ABIE41_RS15645 at 3203.936 kb on - strand, within ABIE41_RS15645 at 3203.936 kb on - strand, within ABIE41_RS15645 at 3203.936 kb on - strand, within ABIE41_RS15645 at 3203.936 kb on - strand, within ABIE41_RS15645 at 3203.988 kb on + strand, within ABIE41_RS15645 at 3204.058 kb on + strand, within ABIE41_RS15645 at 3204.058 kb on + strand, within ABIE41_RS15645 at 3204.092 kb on - strand at 3204.092 kb on - strand at 3204.092 kb on - strand at 3204.170 kb on + strand at 3204.170 kb on + strand at 3204.170 kb on + strand at 3204.171 kb on - strand at 3204.263 kb on + strand at 3205.082 kb on + strand at 3205.146 kb on + strand at 3205.146 kb on + strand at 3205.147 kb on - strand at 3205.147 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Fucose (C) remove 3,202,446 + -0.1 3,202,663 + -0.1 3,202,691 - -0.3 3,202,722 - +0.4 3,202,822 + +0.3 3,202,847 - +0.8 3,202,847 - +0.6 3,202,863 + +0.4 3,202,989 - -0.6 3,202,989 - -0.1 3,202,989 - -1.6 3,203,032 - -1.4 3,203,038 + -1.6 3,203,039 - -1.6 3,203,066 + -0.3 3,203,419 + +0.7 3,203,699 + ABIE41_RS15645 0.41 +0.1 3,203,935 + ABIE41_RS15645 0.70 -0.1 3,203,935 + ABIE41_RS15645 0.70 -1.4 3,203,935 + ABIE41_RS15645 0.70 +1.7 3,203,935 + ABIE41_RS15645 0.70 -0.3 3,203,936 - ABIE41_RS15645 0.70 +0.4 3,203,936 - ABIE41_RS15645 0.70 +0.2 3,203,936 - ABIE41_RS15645 0.70 +1.1 3,203,936 - ABIE41_RS15645 0.70 -0.1 3,203,936 - ABIE41_RS15645 0.70 +0.5 3,203,988 + ABIE41_RS15645 0.77 +0.9 3,204,058 + ABIE41_RS15645 0.86 -1.1 3,204,058 + ABIE41_RS15645 0.86 -1.6 3,204,092 - +1.9 3,204,092 - +1.1 3,204,092 - -1.0 3,204,170 + -0.1 3,204,170 + +0.0 3,204,170 + +0.8 3,204,171 - -1.5 3,204,263 + -0.2 3,205,082 + +0.6 3,205,146 + -1.5 3,205,146 + -1.9 3,205,147 - -1.9 3,205,147 - +0.3
Or see this region's nucleotide sequence