Experiment: m.b. Thallium(I) acetate 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4253 and Echvi_4254 are separated by 33 nucleotides Echvi_4254 and Echvi_4255 are separated by 28 nucleotides
Echvi_4253: Echvi_4253 - Beta-glucanase/Beta-glucan synthetase, at 5,101,142 to 5,102,023
_4253
Echvi_4254: Echvi_4254 - Beta-xylosidase, at 5,102,057 to 5,103,193
_4254
Echvi_4255: Echvi_4255 - SusD family., at 5,103,222 to 5,104,895
_4255
Position (kb)
5102
5103
5104 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 5101.155 kb on + strand at 5101.163 kb on + strand at 5101.163 kb on + strand at 5101.164 kb on - strand at 5101.164 kb on - strand at 5101.167 kb on + strand at 5101.168 kb on - strand at 5101.168 kb on - strand at 5101.168 kb on - strand at 5101.179 kb on + strand at 5101.246 kb on + strand, within Echvi_4253 at 5101.246 kb on + strand, within Echvi_4253 at 5101.246 kb on + strand, within Echvi_4253 at 5101.247 kb on - strand, within Echvi_4253 at 5101.247 kb on - strand, within Echvi_4253 at 5101.247 kb on - strand, within Echvi_4253 at 5101.247 kb on - strand, within Echvi_4253 at 5101.247 kb on - strand, within Echvi_4253 at 5101.249 kb on - strand, within Echvi_4253 at 5101.305 kb on - strand, within Echvi_4253 at 5101.305 kb on - strand, within Echvi_4253 at 5101.342 kb on + strand, within Echvi_4253 at 5101.512 kb on + strand, within Echvi_4253 at 5101.512 kb on + strand, within Echvi_4253 at 5101.513 kb on - strand, within Echvi_4253 at 5101.513 kb on - strand, within Echvi_4253 at 5101.513 kb on - strand, within Echvi_4253 at 5101.513 kb on - strand, within Echvi_4253 at 5101.613 kb on + strand, within Echvi_4253 at 5101.614 kb on - strand, within Echvi_4253 at 5101.619 kb on + strand, within Echvi_4253 at 5101.619 kb on + strand, within Echvi_4253 at 5101.620 kb on - strand, within Echvi_4253 at 5101.620 kb on - strand, within Echvi_4253 at 5101.620 kb on - strand, within Echvi_4253 at 5101.620 kb on - strand, within Echvi_4253 at 5101.622 kb on + strand, within Echvi_4253 at 5101.622 kb on + strand, within Echvi_4253 at 5101.654 kb on + strand, within Echvi_4253 at 5101.655 kb on - strand, within Echvi_4253 at 5101.675 kb on - strand, within Echvi_4253 at 5101.722 kb on + strand, within Echvi_4253 at 5101.723 kb on - strand, within Echvi_4253 at 5101.777 kb on + strand, within Echvi_4253 at 5101.801 kb on - strand, within Echvi_4253 at 5101.839 kb on + strand, within Echvi_4253 at 5101.949 kb on - strand at 5101.988 kb on + strand at 5101.988 kb on + strand at 5101.989 kb on - strand at 5101.989 kb on - strand at 5101.989 kb on - strand at 5102.029 kb on + strand at 5102.030 kb on - strand at 5102.030 kb on - strand at 5102.032 kb on + strand at 5102.039 kb on - strand at 5102.044 kb on - strand at 5102.044 kb on - strand at 5102.046 kb on + strand at 5102.046 kb on + strand at 5102.046 kb on + strand at 5102.058 kb on + strand at 5102.143 kb on - strand at 5102.191 kb on + strand, within Echvi_4254 at 5102.191 kb on + strand, within Echvi_4254 at 5102.192 kb on - strand, within Echvi_4254 at 5102.226 kb on + strand, within Echvi_4254 at 5102.226 kb on + strand, within Echvi_4254 at 5102.226 kb on + strand, within Echvi_4254 at 5102.226 kb on + strand, within Echvi_4254 at 5102.226 kb on + strand, within Echvi_4254 at 5102.231 kb on - strand, within Echvi_4254 at 5102.248 kb on + strand, within Echvi_4254 at 5102.368 kb on + strand, within Echvi_4254 at 5102.369 kb on - strand, within Echvi_4254 at 5102.370 kb on + strand, within Echvi_4254 at 5102.370 kb on + strand, within Echvi_4254 at 5102.371 kb on - strand, within Echvi_4254 at 5102.371 kb on - strand, within Echvi_4254 at 5102.373 kb on + strand, within Echvi_4254 at 5102.374 kb on - strand, within Echvi_4254 at 5102.517 kb on + strand, within Echvi_4254 at 5102.517 kb on + strand, within Echvi_4254 at 5102.663 kb on - strand, within Echvi_4254 at 5102.699 kb on - strand, within Echvi_4254 at 5102.733 kb on + strand, within Echvi_4254 at 5102.733 kb on + strand, within Echvi_4254 at 5102.733 kb on + strand, within Echvi_4254 at 5102.770 kb on + strand, within Echvi_4254 at 5102.782 kb on + strand, within Echvi_4254 at 5102.844 kb on + strand, within Echvi_4254 at 5102.844 kb on + strand, within Echvi_4254 at 5102.844 kb on + strand, within Echvi_4254 at 5102.844 kb on + strand, within Echvi_4254 at 5102.844 kb on + strand, within Echvi_4254 at 5102.845 kb on - strand, within Echvi_4254 at 5102.845 kb on - strand, within Echvi_4254 at 5102.943 kb on + strand, within Echvi_4254 at 5102.944 kb on - strand, within Echvi_4254 at 5102.945 kb on + strand, within Echvi_4254 at 5102.945 kb on + strand, within Echvi_4254 at 5102.945 kb on + strand, within Echvi_4254 at 5103.010 kb on + strand, within Echvi_4254 at 5103.010 kb on + strand, within Echvi_4254 at 5103.010 kb on + strand, within Echvi_4254 at 5103.010 kb on + strand, within Echvi_4254 at 5103.010 kb on + strand, within Echvi_4254 at 5103.010 kb on + strand, within Echvi_4254 at 5103.010 kb on + strand, within Echvi_4254 at 5103.011 kb on - strand, within Echvi_4254 at 5103.011 kb on - strand, within Echvi_4254 at 5103.011 kb on - strand, within Echvi_4254 at 5103.028 kb on - strand, within Echvi_4254 at 5103.151 kb on + strand at 5103.152 kb on - strand at 5103.176 kb on + strand at 5103.177 kb on - strand at 5103.178 kb on + strand at 5103.178 kb on + strand at 5103.178 kb on + strand at 5103.178 kb on + strand at 5103.181 kb on + strand at 5103.181 kb on + strand at 5103.181 kb on + strand at 5103.182 kb on - strand at 5103.188 kb on + strand at 5103.194 kb on + strand at 5103.195 kb on - strand at 5103.195 kb on - strand at 5103.200 kb on + strand at 5103.243 kb on + strand at 5103.243 kb on + strand at 5103.265 kb on - strand at 5103.286 kb on + strand at 5103.287 kb on - strand at 5103.331 kb on + strand at 5103.610 kb on - strand, within Echvi_4255 at 5103.642 kb on + strand, within Echvi_4255 at 5103.643 kb on - strand, within Echvi_4255 at 5103.643 kb on - strand, within Echvi_4255 at 5103.718 kb on + strand, within Echvi_4255 at 5103.808 kb on + strand, within Echvi_4255 at 5103.808 kb on + strand, within Echvi_4255 at 5103.808 kb on + strand, within Echvi_4255 at 5103.808 kb on + strand, within Echvi_4255 at 5103.971 kb on + strand, within Echvi_4255 at 5103.979 kb on - strand, within Echvi_4255 at 5103.985 kb on + strand, within Echvi_4255 at 5103.985 kb on + strand, within Echvi_4255 at 5103.986 kb on - strand, within Echvi_4255 at 5103.986 kb on - strand, within Echvi_4255 at 5104.072 kb on + strand, within Echvi_4255 at 5104.072 kb on + strand, within Echvi_4255 at 5104.072 kb on + strand, within Echvi_4255 at 5104.072 kb on + strand, within Echvi_4255 at 5104.072 kb on + strand, within Echvi_4255 at 5104.073 kb on - strand, within Echvi_4255 at 5104.073 kb on - strand, within Echvi_4255 at 5104.073 kb on - strand, within Echvi_4255 at 5104.073 kb on - strand, within Echvi_4255 at 5104.073 kb on - strand, within Echvi_4255 at 5104.076 kb on + strand, within Echvi_4255 at 5104.090 kb on + strand, within Echvi_4255 at 5104.090 kb on + strand, within Echvi_4255 at 5104.114 kb on + strand, within Echvi_4255 at 5104.115 kb on - strand, within Echvi_4255 at 5104.115 kb on - strand, within Echvi_4255 at 5104.188 kb on + strand, within Echvi_4255 at 5104.189 kb on - strand, within Echvi_4255
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.01 mg/ml remove 5,101,155 + -0.4 5,101,163 + -0.9 5,101,163 + +0.1 5,101,164 - -0.7 5,101,164 - +1.5 5,101,167 + -0.5 5,101,168 - -1.5 5,101,168 - +0.2 5,101,168 - -1.0 5,101,179 + -0.9 5,101,246 + Echvi_4253 0.12 +1.6 5,101,246 + Echvi_4253 0.12 -0.1 5,101,246 + Echvi_4253 0.12 -2.9 5,101,247 - Echvi_4253 0.12 -1.4 5,101,247 - Echvi_4253 0.12 -0.4 5,101,247 - Echvi_4253 0.12 -1.3 5,101,247 - Echvi_4253 0.12 -0.4 5,101,247 - Echvi_4253 0.12 -2.1 5,101,249 - Echvi_4253 0.12 +0.1 5,101,305 - Echvi_4253 0.18 +0.7 5,101,305 - Echvi_4253 0.18 -1.1 5,101,342 + Echvi_4253 0.23 +1.0 5,101,512 + Echvi_4253 0.42 +0.2 5,101,512 + Echvi_4253 0.42 -0.6 5,101,513 - Echvi_4253 0.42 -0.8 5,101,513 - Echvi_4253 0.42 -0.6 5,101,513 - Echvi_4253 0.42 -1.8 5,101,513 - Echvi_4253 0.42 +0.1 5,101,613 + Echvi_4253 0.53 -1.2 5,101,614 - Echvi_4253 0.54 -0.3 5,101,619 + Echvi_4253 0.54 -1.9 5,101,619 + Echvi_4253 0.54 -0.2 5,101,620 - Echvi_4253 0.54 +1.2 5,101,620 - Echvi_4253 0.54 -0.5 5,101,620 - Echvi_4253 0.54 -1.3 5,101,620 - Echvi_4253 0.54 -1.8 5,101,622 + Echvi_4253 0.54 -2.3 5,101,622 + Echvi_4253 0.54 -1.2 5,101,654 + Echvi_4253 0.58 -0.8 5,101,655 - Echvi_4253 0.58 +0.7 5,101,675 - Echvi_4253 0.60 +0.7 5,101,722 + Echvi_4253 0.66 +0.4 5,101,723 - Echvi_4253 0.66 -1.6 5,101,777 + Echvi_4253 0.72 -0.0 5,101,801 - Echvi_4253 0.75 -0.3 5,101,839 + Echvi_4253 0.79 +1.3 5,101,949 - -1.9 5,101,988 + +0.6 5,101,988 + -0.6 5,101,989 - +1.4 5,101,989 - -0.9 5,101,989 - +0.1 5,102,029 + +1.1 5,102,030 - +0.4 5,102,030 - -0.1 5,102,032 + +0.4 5,102,039 - +0.5 5,102,044 - -0.3 5,102,044 - -1.0 5,102,046 + +0.1 5,102,046 + +0.4 5,102,046 + +0.2 5,102,058 + -0.5 5,102,143 - +0.1 5,102,191 + Echvi_4254 0.12 -1.5 5,102,191 + Echvi_4254 0.12 -1.3 5,102,192 - Echvi_4254 0.12 -0.9 5,102,226 + Echvi_4254 0.15 -1.3 5,102,226 + Echvi_4254 0.15 -0.7 5,102,226 + Echvi_4254 0.15 +0.4 5,102,226 + Echvi_4254 0.15 +0.3 5,102,226 + Echvi_4254 0.15 -2.1 5,102,231 - Echvi_4254 0.15 -0.5 5,102,248 + Echvi_4254 0.17 +0.9 5,102,368 + Echvi_4254 0.27 -2.9 5,102,369 - Echvi_4254 0.27 -1.2 5,102,370 + Echvi_4254 0.28 -0.5 5,102,370 + Echvi_4254 0.28 +1.0 5,102,371 - Echvi_4254 0.28 -0.5 5,102,371 - Echvi_4254 0.28 +0.3 5,102,373 + Echvi_4254 0.28 -0.6 5,102,374 - Echvi_4254 0.28 +0.6 5,102,517 + Echvi_4254 0.40 -0.5 5,102,517 + Echvi_4254 0.40 +0.5 5,102,663 - Echvi_4254 0.53 +0.2 5,102,699 - Echvi_4254 0.56 -2.7 5,102,733 + Echvi_4254 0.59 +0.1 5,102,733 + Echvi_4254 0.59 -1.1 5,102,733 + Echvi_4254 0.59 -1.9 5,102,770 + Echvi_4254 0.63 -0.8 5,102,782 + Echvi_4254 0.64 -0.3 5,102,844 + Echvi_4254 0.69 +1.0 5,102,844 + Echvi_4254 0.69 -1.3 5,102,844 + Echvi_4254 0.69 +0.0 5,102,844 + Echvi_4254 0.69 -2.2 5,102,844 + Echvi_4254 0.69 +0.0 5,102,845 - Echvi_4254 0.69 +0.4 5,102,845 - Echvi_4254 0.69 -0.9 5,102,943 + Echvi_4254 0.78 +0.1 5,102,944 - Echvi_4254 0.78 -1.9 5,102,945 + Echvi_4254 0.78 +0.2 5,102,945 + Echvi_4254 0.78 -0.3 5,102,945 + Echvi_4254 0.78 -0.8 5,103,010 + Echvi_4254 0.84 -3.2 5,103,010 + Echvi_4254 0.84 +0.8 5,103,010 + Echvi_4254 0.84 -0.5 5,103,010 + Echvi_4254 0.84 +0.9 5,103,010 + Echvi_4254 0.84 -1.0 5,103,010 + Echvi_4254 0.84 -1.3 5,103,010 + Echvi_4254 0.84 +0.1 5,103,011 - Echvi_4254 0.84 +0.0 5,103,011 - Echvi_4254 0.84 -1.2 5,103,011 - Echvi_4254 0.84 -0.4 5,103,028 - Echvi_4254 0.85 +0.0 5,103,151 + +0.7 5,103,152 - -0.7 5,103,176 + -0.4 5,103,177 - -0.8 5,103,178 + -0.4 5,103,178 + +1.7 5,103,178 + +0.8 5,103,178 + +0.2 5,103,181 + +1.2 5,103,181 + +0.9 5,103,181 + -1.3 5,103,182 - +0.6 5,103,188 + -3.2 5,103,194 + -3.1 5,103,195 - +0.7 5,103,195 - +0.2 5,103,200 + +0.2 5,103,243 + -0.3 5,103,243 + -1.7 5,103,265 - -0.8 5,103,286 + +0.5 5,103,287 - -2.2 5,103,331 + +1.2 5,103,610 - Echvi_4255 0.23 -1.5 5,103,642 + Echvi_4255 0.25 -0.6 5,103,643 - Echvi_4255 0.25 +0.1 5,103,643 - Echvi_4255 0.25 -1.3 5,103,718 + Echvi_4255 0.30 -1.2 5,103,808 + Echvi_4255 0.35 +0.5 5,103,808 + Echvi_4255 0.35 -0.5 5,103,808 + Echvi_4255 0.35 +0.4 5,103,808 + Echvi_4255 0.35 -1.2 5,103,971 + Echvi_4255 0.45 +1.2 5,103,979 - Echvi_4255 0.45 -0.1 5,103,985 + Echvi_4255 0.46 +1.7 5,103,985 + Echvi_4255 0.46 -1.6 5,103,986 - Echvi_4255 0.46 -0.0 5,103,986 - Echvi_4255 0.46 -0.9 5,104,072 + Echvi_4255 0.51 +1.2 5,104,072 + Echvi_4255 0.51 +0.7 5,104,072 + Echvi_4255 0.51 -2.2 5,104,072 + Echvi_4255 0.51 +0.2 5,104,072 + Echvi_4255 0.51 +0.8 5,104,073 - Echvi_4255 0.51 +0.7 5,104,073 - Echvi_4255 0.51 +0.4 5,104,073 - Echvi_4255 0.51 +0.5 5,104,073 - Echvi_4255 0.51 +1.2 5,104,073 - Echvi_4255 0.51 +0.6 5,104,076 + Echvi_4255 0.51 +0.2 5,104,090 + Echvi_4255 0.52 +0.2 5,104,090 + Echvi_4255 0.52 -2.7 5,104,114 + Echvi_4255 0.53 +0.4 5,104,115 - Echvi_4255 0.53 -1.6 5,104,115 - Echvi_4255 0.53 -0.6 5,104,188 + Echvi_4255 0.58 +0.4 5,104,189 - Echvi_4255 0.58 -0.5
Or see this region's nucleotide sequence