Experiment: m.b. Thallium(I) acetate 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4080 and Echvi_4081 are separated by 20 nucleotides Echvi_4081 and Echvi_4082 overlap by 4 nucleotides Echvi_4082 and Echvi_4083 are separated by 12 nucleotides
Echvi_4080: Echvi_4080 - hypothetical protein, at 4,890,844 to 4,891,941
_4080
Echvi_4081: Echvi_4081 - Malic enzyme, at 4,891,962 to 4,894,235
_4081
Echvi_4082: Echvi_4082 - Holliday junction DNA helicase, RuvA subunit, at 4,894,232 to 4,894,831
_4082
Echvi_4083: Echvi_4083 - hypothetical protein, at 4,894,844 to 4,901,980
_4083
Position (kb)
4891
4892
4893
4894
4895 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 4891.732 kb on + strand, within Echvi_4080 at 4891.948 kb on + strand at 4891.950 kb on + strand at 4891.950 kb on + strand at 4891.952 kb on + strand at 4892.225 kb on + strand, within Echvi_4081 at 4892.580 kb on + strand, within Echvi_4081 at 4893.729 kb on + strand, within Echvi_4081 at 4894.075 kb on - strand at 4894.229 kb on + strand at 4894.229 kb on + strand at 4894.229 kb on + strand at 4894.229 kb on + strand at 4894.231 kb on + strand at 4894.231 kb on + strand at 4894.231 kb on + strand at 4894.231 kb on + strand at 4894.242 kb on - strand at 4894.282 kb on - strand at 4894.293 kb on + strand, within Echvi_4082 at 4894.320 kb on + strand, within Echvi_4082 at 4894.334 kb on + strand, within Echvi_4082 at 4894.612 kb on + strand, within Echvi_4082 at 4894.613 kb on - strand, within Echvi_4082 at 4894.618 kb on + strand, within Echvi_4082 at 4894.808 kb on - strand at 4894.818 kb on + strand at 4894.833 kb on + strand at 4894.837 kb on - strand at 4894.849 kb on + strand at 4894.850 kb on - strand at 4894.879 kb on + strand at 4894.879 kb on + strand at 4894.879 kb on + strand at 4894.909 kb on - strand at 4894.981 kb on + strand at 4895.037 kb on + strand at 4895.054 kb on - strand at 4895.109 kb on - strand at 4895.175 kb on - strand at 4895.175 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.01 mg/ml remove 4,891,732 + Echvi_4080 0.81 -0.3 4,891,948 + -0.6 4,891,950 + -0.7 4,891,950 + +0.2 4,891,952 + +0.3 4,892,225 + Echvi_4081 0.12 -2.3 4,892,580 + Echvi_4081 0.27 +1.0 4,893,729 + Echvi_4081 0.78 -1.2 4,894,075 - +1.1 4,894,229 + -0.5 4,894,229 + +1.0 4,894,229 + +1.2 4,894,229 + -0.3 4,894,231 + -0.5 4,894,231 + +1.7 4,894,231 + -0.2 4,894,231 + -2.5 4,894,242 - -1.4 4,894,282 - +0.2 4,894,293 + Echvi_4082 0.10 -1.2 4,894,320 + Echvi_4082 0.15 +1.5 4,894,334 + Echvi_4082 0.17 +0.1 4,894,612 + Echvi_4082 0.63 +4.0 4,894,613 - Echvi_4082 0.64 -0.5 4,894,618 + Echvi_4082 0.64 +0.8 4,894,808 - +0.1 4,894,818 + +0.1 4,894,833 + -0.2 4,894,837 - -0.0 4,894,849 + +0.2 4,894,850 - +0.9 4,894,879 + -0.7 4,894,879 + +0.5 4,894,879 + +0.5 4,894,909 - -0.6 4,894,981 + -0.2 4,895,037 + +1.1 4,895,054 - +0.5 4,895,109 - -0.1 4,895,175 - -0.3 4,895,175 - +0.9
Or see this region's nucleotide sequence