Experiment: m.b. Thallium(I) acetate 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4039 and Echvi_4040 are separated by 163 nucleotides Echvi_4040 and Echvi_4041 are separated by 126 nucleotides
Echvi_4039: Echvi_4039 - aconitate hydratase 1, at 4,843,032 to 4,845,809
_4039
Echvi_4040: Echvi_4040 - Uncharacterized protein conserved in bacteria, at 4,845,973 to 4,847,019
_4040
Echvi_4041: Echvi_4041 - Retron-type reverse transcriptase, at 4,847,146 to 4,848,594
_4041
Position (kb)
4845
4846
4847
4848 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4845.042 kb on - strand, within Echvi_4039 at 4845.071 kb on + strand, within Echvi_4039 at 4845.071 kb on + strand, within Echvi_4039 at 4845.072 kb on - strand, within Echvi_4039 at 4845.078 kb on + strand at 4845.081 kb on + strand, within Echvi_4039 at 4845.081 kb on + strand, within Echvi_4039 at 4845.081 kb on + strand, within Echvi_4039 at 4845.096 kb on - strand, within Echvi_4039 at 4845.100 kb on + strand, within Echvi_4039 at 4845.144 kb on + strand, within Echvi_4039 at 4845.257 kb on - strand, within Echvi_4039 at 4845.267 kb on + strand, within Echvi_4039 at 4845.268 kb on - strand, within Echvi_4039 at 4845.268 kb on - strand, within Echvi_4039 at 4845.287 kb on + strand, within Echvi_4039 at 4845.288 kb on - strand, within Echvi_4039 at 4845.288 kb on - strand, within Echvi_4039 at 4845.391 kb on + strand, within Echvi_4039 at 4845.391 kb on + strand, within Echvi_4039 at 4845.392 kb on - strand, within Echvi_4039 at 4845.525 kb on + strand, within Echvi_4039 at 4845.526 kb on - strand, within Echvi_4039 at 4845.555 kb on + strand at 4845.556 kb on - strand at 4845.575 kb on - strand at 4845.655 kb on + strand at 4845.656 kb on - strand at 4845.656 kb on - strand at 4845.656 kb on - strand at 4845.683 kb on + strand at 4845.683 kb on + strand at 4845.684 kb on - strand at 4845.684 kb on - strand at 4845.684 kb on - strand at 4845.684 kb on - strand at 4845.754 kb on - strand at 4845.754 kb on - strand at 4845.794 kb on - strand at 4845.802 kb on - strand at 4845.826 kb on + strand at 4845.881 kb on + strand at 4845.884 kb on + strand at 4845.886 kb on + strand at 4845.946 kb on - strand at 4845.950 kb on + strand at 4845.951 kb on - strand at 4845.958 kb on + strand at 4845.958 kb on + strand at 4845.970 kb on - strand at 4845.972 kb on + strand at 4845.972 kb on + strand at 4845.973 kb on - strand at 4845.986 kb on + strand at 4845.986 kb on + strand at 4845.986 kb on + strand at 4845.987 kb on - strand at 4845.987 kb on - strand at 4846.008 kb on - strand at 4846.094 kb on + strand, within Echvi_4040 at 4846.094 kb on + strand, within Echvi_4040 at 4846.166 kb on + strand, within Echvi_4040 at 4846.166 kb on + strand, within Echvi_4040 at 4846.166 kb on + strand, within Echvi_4040 at 4846.166 kb on + strand, within Echvi_4040 at 4846.167 kb on - strand, within Echvi_4040 at 4846.167 kb on - strand, within Echvi_4040 at 4846.167 kb on - strand, within Echvi_4040 at 4846.167 kb on - strand, within Echvi_4040 at 4846.281 kb on - strand, within Echvi_4040 at 4846.298 kb on - strand, within Echvi_4040 at 4846.303 kb on + strand, within Echvi_4040 at 4846.334 kb on + strand, within Echvi_4040 at 4846.334 kb on + strand, within Echvi_4040 at 4846.453 kb on - strand, within Echvi_4040 at 4846.456 kb on + strand, within Echvi_4040 at 4846.456 kb on + strand, within Echvi_4040 at 4846.456 kb on + strand, within Echvi_4040 at 4846.456 kb on + strand, within Echvi_4040 at 4846.456 kb on + strand, within Echvi_4040 at 4846.457 kb on - strand, within Echvi_4040 at 4846.472 kb on - strand, within Echvi_4040 at 4846.472 kb on - strand, within Echvi_4040 at 4846.472 kb on - strand, within Echvi_4040 at 4846.472 kb on - strand, within Echvi_4040 at 4846.570 kb on - strand, within Echvi_4040 at 4846.575 kb on - strand, within Echvi_4040 at 4846.591 kb on - strand, within Echvi_4040 at 4846.620 kb on + strand, within Echvi_4040 at 4846.621 kb on - strand, within Echvi_4040 at 4846.621 kb on - strand, within Echvi_4040 at 4846.621 kb on - strand, within Echvi_4040 at 4846.643 kb on + strand, within Echvi_4040 at 4846.712 kb on + strand, within Echvi_4040 at 4846.713 kb on - strand, within Echvi_4040 at 4846.723 kb on + strand, within Echvi_4040 at 4846.724 kb on - strand, within Echvi_4040 at 4846.724 kb on - strand, within Echvi_4040 at 4846.724 kb on - strand, within Echvi_4040 at 4846.724 kb on - strand, within Echvi_4040 at 4846.726 kb on - strand, within Echvi_4040 at 4846.726 kb on - strand, within Echvi_4040 at 4846.729 kb on - strand, within Echvi_4040 at 4846.749 kb on - strand, within Echvi_4040 at 4846.787 kb on - strand, within Echvi_4040 at 4846.787 kb on - strand, within Echvi_4040 at 4846.787 kb on - strand, within Echvi_4040 at 4846.787 kb on - strand, within Echvi_4040 at 4846.791 kb on + strand, within Echvi_4040 at 4846.836 kb on + strand, within Echvi_4040 at 4846.836 kb on + strand, within Echvi_4040 at 4846.836 kb on + strand, within Echvi_4040 at 4846.838 kb on + strand, within Echvi_4040 at 4846.838 kb on + strand, within Echvi_4040 at 4846.839 kb on - strand, within Echvi_4040 at 4846.845 kb on - strand, within Echvi_4040 at 4846.956 kb on - strand at 4847.060 kb on + strand at 4847.087 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.01 mg/ml remove 4,845,042 - Echvi_4039 0.72 +1.3 4,845,071 + Echvi_4039 0.73 +2.0 4,845,071 + Echvi_4039 0.73 -1.7 4,845,072 - Echvi_4039 0.73 +0.7 4,845,078 + +0.4 4,845,081 + Echvi_4039 0.74 -1.6 4,845,081 + Echvi_4039 0.74 +0.8 4,845,081 + Echvi_4039 0.74 -0.2 4,845,096 - Echvi_4039 0.74 +0.3 4,845,100 + Echvi_4039 0.74 +0.0 4,845,144 + Echvi_4039 0.76 +0.6 4,845,257 - Echvi_4039 0.80 -0.1 4,845,267 + Echvi_4039 0.80 -0.8 4,845,268 - Echvi_4039 0.80 -0.8 4,845,268 - Echvi_4039 0.80 -0.3 4,845,287 + Echvi_4039 0.81 -0.9 4,845,288 - Echvi_4039 0.81 -0.4 4,845,288 - Echvi_4039 0.81 +0.2 4,845,391 + Echvi_4039 0.85 -0.3 4,845,391 + Echvi_4039 0.85 +0.7 4,845,392 - Echvi_4039 0.85 +0.8 4,845,525 + Echvi_4039 0.90 -1.1 4,845,526 - Echvi_4039 0.90 -2.4 4,845,555 + +0.4 4,845,556 - +0.8 4,845,575 - -1.7 4,845,655 + +0.3 4,845,656 - -1.5 4,845,656 - -0.6 4,845,656 - +0.7 4,845,683 + +1.6 4,845,683 + -0.1 4,845,684 - -0.9 4,845,684 - -1.4 4,845,684 - -1.6 4,845,684 - +0.5 4,845,754 - +0.3 4,845,754 - +0.7 4,845,794 - +0.2 4,845,802 - -0.1 4,845,826 + +1.8 4,845,881 + +0.4 4,845,884 + -1.1 4,845,886 + +1.1 4,845,946 - -0.9 4,845,950 + +1.1 4,845,951 - -2.2 4,845,958 + +0.1 4,845,958 + -2.6 4,845,970 - -0.6 4,845,972 + +2.1 4,845,972 + +1.7 4,845,973 - -0.5 4,845,986 + +0.7 4,845,986 + -1.1 4,845,986 + -1.9 4,845,987 - +0.0 4,845,987 - -0.9 4,846,008 - -0.5 4,846,094 + Echvi_4040 0.12 +0.1 4,846,094 + Echvi_4040 0.12 +0.7 4,846,166 + Echvi_4040 0.18 -1.5 4,846,166 + Echvi_4040 0.18 -0.8 4,846,166 + Echvi_4040 0.18 -0.8 4,846,166 + Echvi_4040 0.18 +0.8 4,846,167 - Echvi_4040 0.19 -1.0 4,846,167 - Echvi_4040 0.19 -1.5 4,846,167 - Echvi_4040 0.19 -1.0 4,846,167 - Echvi_4040 0.19 -0.7 4,846,281 - Echvi_4040 0.29 -0.0 4,846,298 - Echvi_4040 0.31 -0.1 4,846,303 + Echvi_4040 0.32 -1.1 4,846,334 + Echvi_4040 0.34 -0.6 4,846,334 + Echvi_4040 0.34 -0.3 4,846,453 - Echvi_4040 0.46 -1.2 4,846,456 + Echvi_4040 0.46 -0.6 4,846,456 + Echvi_4040 0.46 -1.3 4,846,456 + Echvi_4040 0.46 -0.6 4,846,456 + Echvi_4040 0.46 -0.4 4,846,456 + Echvi_4040 0.46 +0.5 4,846,457 - Echvi_4040 0.46 -2.7 4,846,472 - Echvi_4040 0.48 -3.3 4,846,472 - Echvi_4040 0.48 +0.4 4,846,472 - Echvi_4040 0.48 +1.3 4,846,472 - Echvi_4040 0.48 +0.6 4,846,570 - Echvi_4040 0.57 -2.3 4,846,575 - Echvi_4040 0.57 +0.1 4,846,591 - Echvi_4040 0.59 -1.0 4,846,620 + Echvi_4040 0.62 +0.5 4,846,621 - Echvi_4040 0.62 -0.5 4,846,621 - Echvi_4040 0.62 +0.1 4,846,621 - Echvi_4040 0.62 -1.5 4,846,643 + Echvi_4040 0.64 +0.2 4,846,712 + Echvi_4040 0.71 -0.0 4,846,713 - Echvi_4040 0.71 -0.5 4,846,723 + Echvi_4040 0.72 -2.0 4,846,724 - Echvi_4040 0.72 +2.0 4,846,724 - Echvi_4040 0.72 +1.9 4,846,724 - Echvi_4040 0.72 -0.8 4,846,724 - Echvi_4040 0.72 -3.7 4,846,726 - Echvi_4040 0.72 -2.2 4,846,726 - Echvi_4040 0.72 +1.2 4,846,729 - Echvi_4040 0.72 -3.3 4,846,749 - Echvi_4040 0.74 -3.1 4,846,787 - Echvi_4040 0.78 -0.3 4,846,787 - Echvi_4040 0.78 -0.1 4,846,787 - Echvi_4040 0.78 -1.2 4,846,787 - Echvi_4040 0.78 +0.1 4,846,791 + Echvi_4040 0.78 +1.5 4,846,836 + Echvi_4040 0.82 +1.5 4,846,836 + Echvi_4040 0.82 -0.0 4,846,836 + Echvi_4040 0.82 -1.3 4,846,838 + Echvi_4040 0.83 -1.1 4,846,838 + Echvi_4040 0.83 -3.1 4,846,839 - Echvi_4040 0.83 -0.1 4,846,845 - Echvi_4040 0.83 +0.3 4,846,956 - -0.5 4,847,060 + +1.2 4,847,087 + +0.6
Or see this region's nucleotide sequence