Experiment: m.b. Thallium(I) acetate 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3700 and Echvi_3701 are separated by 122 nucleotides Echvi_3701 and Echvi_3702 are separated by 53 nucleotides
Echvi_3700: Echvi_3700 - Outer membrane receptor proteins, mostly Fe transport, at 4,406,523 to 4,408,886
_3700
Echvi_3701: Echvi_3701 - hypothetical protein, at 4,409,009 to 4,409,155
_3701
Echvi_3702: Echvi_3702 - von Willebrand factor type A domain., at 4,409,209 to 4,410,174
_3702
Position (kb)
4409
4410 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4408.046 kb on + strand, within Echvi_3700 at 4408.046 kb on + strand, within Echvi_3700 at 4408.093 kb on + strand, within Echvi_3700 at 4408.094 kb on - strand, within Echvi_3700 at 4408.127 kb on + strand, within Echvi_3700 at 4408.128 kb on - strand, within Echvi_3700 at 4408.169 kb on + strand, within Echvi_3700 at 4408.169 kb on + strand, within Echvi_3700 at 4408.206 kb on - strand, within Echvi_3700 at 4408.255 kb on + strand, within Echvi_3700 at 4408.256 kb on - strand, within Echvi_3700 at 4408.277 kb on + strand, within Echvi_3700 at 4408.279 kb on + strand, within Echvi_3700 at 4408.279 kb on + strand, within Echvi_3700 at 4408.279 kb on + strand, within Echvi_3700 at 4408.280 kb on - strand, within Echvi_3700 at 4408.280 kb on - strand, within Echvi_3700 at 4408.280 kb on - strand, within Echvi_3700 at 4408.280 kb on - strand, within Echvi_3700 at 4408.280 kb on - strand, within Echvi_3700 at 4408.348 kb on + strand, within Echvi_3700 at 4408.348 kb on + strand, within Echvi_3700 at 4408.407 kb on + strand, within Echvi_3700 at 4408.407 kb on + strand, within Echvi_3700 at 4408.408 kb on - strand, within Echvi_3700 at 4408.408 kb on - strand, within Echvi_3700 at 4408.408 kb on - strand, within Echvi_3700 at 4408.523 kb on + strand, within Echvi_3700 at 4408.523 kb on + strand, within Echvi_3700 at 4408.523 kb on + strand, within Echvi_3700 at 4408.638 kb on - strand, within Echvi_3700 at 4408.906 kb on - strand at 4408.907 kb on + strand at 4408.907 kb on + strand at 4408.907 kb on + strand at 4408.907 kb on + strand at 4408.907 kb on + strand at 4408.907 kb on + strand at 4408.962 kb on - strand at 4408.962 kb on - strand at 4408.992 kb on - strand at 4409.010 kb on + strand at 4409.011 kb on - strand at 4409.015 kb on + strand at 4409.015 kb on + strand at 4409.036 kb on - strand, within Echvi_3701 at 4409.041 kb on + strand, within Echvi_3701 at 4409.074 kb on + strand, within Echvi_3701 at 4409.074 kb on + strand, within Echvi_3701 at 4409.075 kb on - strand, within Echvi_3701 at 4409.075 kb on - strand, within Echvi_3701 at 4409.075 kb on - strand, within Echvi_3701 at 4409.075 kb on - strand, within Echvi_3701 at 4409.075 kb on - strand, within Echvi_3701 at 4409.122 kb on - strand, within Echvi_3701 at 4409.188 kb on + strand at 4409.188 kb on + strand at 4409.231 kb on + strand at 4409.237 kb on + strand at 4409.237 kb on + strand at 4409.238 kb on - strand at 4409.238 kb on - strand at 4409.244 kb on + strand at 4409.281 kb on + strand at 4409.281 kb on + strand at 4409.308 kb on - strand, within Echvi_3702 at 4409.308 kb on - strand, within Echvi_3702 at 4409.308 kb on - strand, within Echvi_3702 at 4409.384 kb on + strand, within Echvi_3702 at 4409.385 kb on - strand, within Echvi_3702 at 4409.595 kb on + strand, within Echvi_3702 at 4409.674 kb on + strand, within Echvi_3702 at 4409.799 kb on + strand, within Echvi_3702 at 4409.800 kb on - strand, within Echvi_3702 at 4409.855 kb on + strand, within Echvi_3702 at 4409.855 kb on + strand, within Echvi_3702 at 4409.986 kb on + strand, within Echvi_3702 at 4410.078 kb on - strand at 4410.078 kb on - strand at 4410.078 kb on - strand at 4410.093 kb on + strand at 4410.093 kb on + strand at 4410.097 kb on + strand at 4410.097 kb on + strand at 4410.098 kb on - strand at 4410.103 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.01 mg/ml remove 4,408,046 + Echvi_3700 0.64 +0.5 4,408,046 + Echvi_3700 0.64 -0.8 4,408,093 + Echvi_3700 0.66 +1.1 4,408,094 - Echvi_3700 0.66 -0.4 4,408,127 + Echvi_3700 0.68 +0.5 4,408,128 - Echvi_3700 0.68 -2.2 4,408,169 + Echvi_3700 0.70 -0.8 4,408,169 + Echvi_3700 0.70 +1.0 4,408,206 - Echvi_3700 0.71 -0.2 4,408,255 + Echvi_3700 0.73 +0.2 4,408,256 - Echvi_3700 0.73 +0.6 4,408,277 + Echvi_3700 0.74 +0.2 4,408,279 + Echvi_3700 0.74 +0.2 4,408,279 + Echvi_3700 0.74 -0.7 4,408,279 + Echvi_3700 0.74 +0.0 4,408,280 - Echvi_3700 0.74 -1.1 4,408,280 - Echvi_3700 0.74 -1.1 4,408,280 - Echvi_3700 0.74 +0.6 4,408,280 - Echvi_3700 0.74 +0.6 4,408,280 - Echvi_3700 0.74 -1.0 4,408,348 + Echvi_3700 0.77 +0.4 4,408,348 + Echvi_3700 0.77 +0.8 4,408,407 + Echvi_3700 0.80 +1.0 4,408,407 + Echvi_3700 0.80 -1.4 4,408,408 - Echvi_3700 0.80 +1.1 4,408,408 - Echvi_3700 0.80 -1.8 4,408,408 - Echvi_3700 0.80 +0.3 4,408,523 + Echvi_3700 0.85 -0.3 4,408,523 + Echvi_3700 0.85 +1.6 4,408,523 + Echvi_3700 0.85 -1.5 4,408,638 - Echvi_3700 0.89 -0.8 4,408,906 - +0.8 4,408,907 + +0.5 4,408,907 + -0.5 4,408,907 + -1.7 4,408,907 + -1.2 4,408,907 + +0.1 4,408,907 + +0.4 4,408,962 - +0.7 4,408,962 - -2.4 4,408,992 - -0.2 4,409,010 + +0.7 4,409,011 - +0.5 4,409,015 + -0.2 4,409,015 + +0.1 4,409,036 - Echvi_3701 0.18 -1.4 4,409,041 + Echvi_3701 0.22 -1.4 4,409,074 + Echvi_3701 0.44 -0.8 4,409,074 + Echvi_3701 0.44 -0.7 4,409,075 - Echvi_3701 0.45 -0.2 4,409,075 - Echvi_3701 0.45 +0.2 4,409,075 - Echvi_3701 0.45 -2.0 4,409,075 - Echvi_3701 0.45 -1.7 4,409,075 - Echvi_3701 0.45 -1.0 4,409,122 - Echvi_3701 0.77 -0.2 4,409,188 + +1.9 4,409,188 + -0.0 4,409,231 + +0.0 4,409,237 + +1.9 4,409,237 + +1.4 4,409,238 - +0.4 4,409,238 - +0.5 4,409,244 + +0.4 4,409,281 + +0.9 4,409,281 + +0.7 4,409,308 - Echvi_3702 0.10 +0.5 4,409,308 - Echvi_3702 0.10 -0.5 4,409,308 - Echvi_3702 0.10 +1.6 4,409,384 + Echvi_3702 0.18 +1.3 4,409,385 - Echvi_3702 0.18 +0.5 4,409,595 + Echvi_3702 0.40 +1.6 4,409,674 + Echvi_3702 0.48 +0.4 4,409,799 + Echvi_3702 0.61 -1.7 4,409,800 - Echvi_3702 0.61 -1.9 4,409,855 + Echvi_3702 0.67 +0.3 4,409,855 + Echvi_3702 0.67 -1.7 4,409,986 + Echvi_3702 0.80 -0.0 4,410,078 - +0.1 4,410,078 - +0.5 4,410,078 - +0.1 4,410,093 + +0.6 4,410,093 + -0.2 4,410,097 + +0.5 4,410,097 + +0.3 4,410,098 - -0.8 4,410,103 + -0.4
Or see this region's nucleotide sequence