Experiment: m.b. Thallium(I) acetate 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3494 and Echvi_3495 are separated by 268 nucleotides Echvi_3495 and Echvi_3496 are separated by 115 nucleotides
Echvi_3494: Echvi_3494 - Fibrobacter succinogenes major domain (Fib_succ_major)., at 4,139,558 to 4,140,979
_3494
Echvi_3495: Echvi_3495 - Transcriptional regulators, at 4,141,248 to 4,142,273
_3495
Echvi_3496: Echvi_3496 - DNA repair exonuclease, at 4,142,389 to 4,144,239
_3496
Position (kb)
4141
4142
4143 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4140.280 kb on - strand, within Echvi_3494 at 4140.280 kb on - strand, within Echvi_3494 at 4140.288 kb on + strand, within Echvi_3494 at 4140.289 kb on - strand, within Echvi_3494 at 4140.360 kb on + strand, within Echvi_3494 at 4140.426 kb on + strand, within Echvi_3494 at 4140.426 kb on + strand, within Echvi_3494 at 4140.426 kb on + strand, within Echvi_3494 at 4140.427 kb on - strand, within Echvi_3494 at 4140.427 kb on - strand, within Echvi_3494 at 4140.427 kb on - strand, within Echvi_3494 at 4140.434 kb on - strand, within Echvi_3494 at 4140.462 kb on + strand, within Echvi_3494 at 4140.463 kb on - strand, within Echvi_3494 at 4140.463 kb on - strand, within Echvi_3494 at 4140.463 kb on - strand, within Echvi_3494 at 4140.474 kb on - strand, within Echvi_3494 at 4140.515 kb on + strand, within Echvi_3494 at 4140.516 kb on - strand, within Echvi_3494 at 4140.546 kb on - strand, within Echvi_3494 at 4140.562 kb on - strand, within Echvi_3494 at 4140.583 kb on + strand, within Echvi_3494 at 4140.583 kb on + strand, within Echvi_3494 at 4140.584 kb on - strand, within Echvi_3494 at 4140.584 kb on - strand, within Echvi_3494 at 4140.584 kb on - strand, within Echvi_3494 at 4140.584 kb on - strand, within Echvi_3494 at 4140.584 kb on - strand, within Echvi_3494 at 4140.596 kb on - strand, within Echvi_3494 at 4140.596 kb on - strand, within Echvi_3494 at 4140.708 kb on + strand, within Echvi_3494 at 4140.714 kb on + strand, within Echvi_3494 at 4140.748 kb on - strand, within Echvi_3494 at 4140.802 kb on + strand, within Echvi_3494 at 4140.802 kb on + strand, within Echvi_3494 at 4140.803 kb on - strand, within Echvi_3494 at 4140.803 kb on - strand, within Echvi_3494 at 4140.933 kb on - strand at 4140.933 kb on - strand at 4140.944 kb on + strand at 4140.945 kb on - strand at 4140.945 kb on - strand at 4140.947 kb on - strand at 4140.973 kb on + strand at 4140.987 kb on + strand at 4140.988 kb on - strand at 4140.988 kb on - strand at 4141.101 kb on + strand at 4141.164 kb on + strand at 4141.164 kb on + strand at 4141.165 kb on - strand at 4141.165 kb on - strand at 4141.171 kb on - strand at 4141.307 kb on + strand at 4141.307 kb on + strand at 4141.400 kb on + strand, within Echvi_3495 at 4141.400 kb on + strand, within Echvi_3495 at 4141.400 kb on + strand, within Echvi_3495 at 4141.401 kb on - strand, within Echvi_3495 at 4141.401 kb on - strand, within Echvi_3495 at 4141.427 kb on + strand, within Echvi_3495 at 4141.509 kb on - strand, within Echvi_3495 at 4141.529 kb on + strand, within Echvi_3495 at 4141.773 kb on + strand, within Echvi_3495 at 4141.774 kb on - strand, within Echvi_3495 at 4141.799 kb on + strand, within Echvi_3495 at 4141.857 kb on + strand, within Echvi_3495 at 4141.859 kb on + strand, within Echvi_3495 at 4141.859 kb on + strand, within Echvi_3495 at 4141.859 kb on + strand, within Echvi_3495 at 4141.860 kb on - strand, within Echvi_3495 at 4141.860 kb on - strand, within Echvi_3495 at 4141.860 kb on - strand, within Echvi_3495 at 4141.861 kb on - strand, within Echvi_3495 at 4141.884 kb on - strand, within Echvi_3495 at 4141.899 kb on - strand, within Echvi_3495 at 4141.988 kb on + strand, within Echvi_3495 at 4141.989 kb on - strand, within Echvi_3495 at 4141.989 kb on - strand, within Echvi_3495 at 4141.990 kb on + strand, within Echvi_3495 at 4141.990 kb on + strand, within Echvi_3495 at 4141.990 kb on + strand, within Echvi_3495 at 4141.990 kb on + strand, within Echvi_3495 at 4141.991 kb on - strand, within Echvi_3495 at 4141.991 kb on - strand, within Echvi_3495 at 4142.067 kb on - strand, within Echvi_3495 at 4142.097 kb on + strand, within Echvi_3495 at 4142.098 kb on - strand, within Echvi_3495 at 4142.098 kb on - strand, within Echvi_3495 at 4142.102 kb on + strand, within Echvi_3495 at 4142.102 kb on + strand, within Echvi_3495 at 4142.103 kb on - strand, within Echvi_3495 at 4142.106 kb on + strand, within Echvi_3495 at 4142.206 kb on + strand at 4142.207 kb on - strand at 4142.269 kb on + strand at 4142.321 kb on + strand at 4142.370 kb on + strand at 4142.376 kb on + strand at 4142.376 kb on + strand at 4142.376 kb on + strand at 4142.383 kb on + strand at 4142.390 kb on + strand at 4142.443 kb on + strand at 4142.443 kb on + strand at 4142.444 kb on - strand at 4142.444 kb on - strand at 4142.444 kb on - strand at 4142.445 kb on + strand at 4142.445 kb on + strand at 4142.445 kb on + strand at 4142.446 kb on - strand at 4142.463 kb on + strand at 4142.467 kb on + strand at 4142.468 kb on - strand at 4142.616 kb on - strand, within Echvi_3496 at 4142.625 kb on + strand, within Echvi_3496 at 4142.626 kb on - strand, within Echvi_3496 at 4142.626 kb on - strand, within Echvi_3496 at 4142.684 kb on - strand, within Echvi_3496 at 4142.727 kb on + strand, within Echvi_3496 at 4142.749 kb on + strand, within Echvi_3496 at 4142.778 kb on - strand, within Echvi_3496 at 4142.783 kb on - strand, within Echvi_3496 at 4142.806 kb on + strand, within Echvi_3496 at 4142.806 kb on + strand, within Echvi_3496 at 4142.807 kb on - strand, within Echvi_3496 at 4142.807 kb on - strand, within Echvi_3496 at 4142.807 kb on - strand, within Echvi_3496 at 4142.868 kb on + strand, within Echvi_3496 at 4142.885 kb on + strand, within Echvi_3496 at 4142.886 kb on - strand, within Echvi_3496 at 4142.886 kb on - strand, within Echvi_3496 at 4142.895 kb on - strand, within Echvi_3496 at 4142.955 kb on - strand, within Echvi_3496 at 4142.968 kb on + strand, within Echvi_3496 at 4142.972 kb on + strand, within Echvi_3496 at 4142.973 kb on - strand at 4143.010 kb on - strand, within Echvi_3496 at 4143.032 kb on - strand, within Echvi_3496 at 4143.032 kb on - strand, within Echvi_3496 at 4143.077 kb on + strand, within Echvi_3496 at 4143.103 kb on - strand, within Echvi_3496 at 4143.159 kb on + strand, within Echvi_3496 at 4143.159 kb on + strand, within Echvi_3496 at 4143.159 kb on + strand, within Echvi_3496 at 4143.159 kb on + strand, within Echvi_3496 at 4143.159 kb on + strand, within Echvi_3496 at 4143.159 kb on + strand, within Echvi_3496 at 4143.159 kb on + strand, within Echvi_3496 at 4143.159 kb on + strand, within Echvi_3496 at 4143.160 kb on - strand, within Echvi_3496 at 4143.160 kb on - strand, within Echvi_3496 at 4143.160 kb on - strand, within Echvi_3496 at 4143.160 kb on - strand, within Echvi_3496 at 4143.198 kb on - strand, within Echvi_3496
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.01 mg/ml remove 4,140,280 - Echvi_3494 0.51 -0.0 4,140,280 - Echvi_3494 0.51 -0.4 4,140,288 + Echvi_3494 0.51 +0.3 4,140,289 - Echvi_3494 0.51 -0.8 4,140,360 + Echvi_3494 0.56 -1.2 4,140,426 + Echvi_3494 0.61 -1.6 4,140,426 + Echvi_3494 0.61 -0.1 4,140,426 + Echvi_3494 0.61 +1.1 4,140,427 - Echvi_3494 0.61 +0.4 4,140,427 - Echvi_3494 0.61 -0.2 4,140,427 - Echvi_3494 0.61 -1.0 4,140,434 - Echvi_3494 0.62 -0.2 4,140,462 + Echvi_3494 0.64 +0.1 4,140,463 - Echvi_3494 0.64 +2.2 4,140,463 - Echvi_3494 0.64 -1.7 4,140,463 - Echvi_3494 0.64 +0.2 4,140,474 - Echvi_3494 0.64 +0.3 4,140,515 + Echvi_3494 0.67 +1.4 4,140,516 - Echvi_3494 0.67 -0.2 4,140,546 - Echvi_3494 0.69 -0.7 4,140,562 - Echvi_3494 0.71 +0.2 4,140,583 + Echvi_3494 0.72 -0.3 4,140,583 + Echvi_3494 0.72 -1.2 4,140,584 - Echvi_3494 0.72 -1.6 4,140,584 - Echvi_3494 0.72 +0.8 4,140,584 - Echvi_3494 0.72 -1.4 4,140,584 - Echvi_3494 0.72 -1.6 4,140,584 - Echvi_3494 0.72 -0.3 4,140,596 - Echvi_3494 0.73 +0.2 4,140,596 - Echvi_3494 0.73 +1.5 4,140,708 + Echvi_3494 0.81 -0.5 4,140,714 + Echvi_3494 0.81 -0.6 4,140,748 - Echvi_3494 0.84 +1.5 4,140,802 + Echvi_3494 0.87 -0.0 4,140,802 + Echvi_3494 0.87 +0.3 4,140,803 - Echvi_3494 0.88 -2.1 4,140,803 - Echvi_3494 0.88 -0.6 4,140,933 - -0.0 4,140,933 - +0.2 4,140,944 + -0.2 4,140,945 - -1.6 4,140,945 - +0.1 4,140,947 - -1.1 4,140,973 + +0.3 4,140,987 + +1.0 4,140,988 - -0.3 4,140,988 - -1.2 4,141,101 + -0.2 4,141,164 + +0.1 4,141,164 + -0.4 4,141,165 - -1.1 4,141,165 - +0.7 4,141,171 - -0.4 4,141,307 + +0.1 4,141,307 + -1.2 4,141,400 + Echvi_3495 0.15 +0.4 4,141,400 + Echvi_3495 0.15 +0.4 4,141,400 + Echvi_3495 0.15 -0.4 4,141,401 - Echvi_3495 0.15 +0.0 4,141,401 - Echvi_3495 0.15 -1.4 4,141,427 + Echvi_3495 0.17 +0.2 4,141,509 - Echvi_3495 0.25 -1.5 4,141,529 + Echvi_3495 0.27 -1.2 4,141,773 + Echvi_3495 0.51 +2.8 4,141,774 - Echvi_3495 0.51 -0.4 4,141,799 + Echvi_3495 0.54 +2.0 4,141,857 + Echvi_3495 0.59 +2.4 4,141,859 + Echvi_3495 0.60 -0.7 4,141,859 + Echvi_3495 0.60 -0.6 4,141,859 + Echvi_3495 0.60 +0.1 4,141,860 - Echvi_3495 0.60 +0.4 4,141,860 - Echvi_3495 0.60 -0.1 4,141,860 - Echvi_3495 0.60 -0.1 4,141,861 - Echvi_3495 0.60 +1.1 4,141,884 - Echvi_3495 0.62 +0.7 4,141,899 - Echvi_3495 0.63 +0.6 4,141,988 + Echvi_3495 0.72 +0.8 4,141,989 - Echvi_3495 0.72 -0.1 4,141,989 - Echvi_3495 0.72 -1.8 4,141,990 + Echvi_3495 0.72 -2.7 4,141,990 + Echvi_3495 0.72 +0.6 4,141,990 + Echvi_3495 0.72 +2.8 4,141,990 + Echvi_3495 0.72 -0.2 4,141,991 - Echvi_3495 0.72 -0.4 4,141,991 - Echvi_3495 0.72 -0.5 4,142,067 - Echvi_3495 0.80 -3.0 4,142,097 + Echvi_3495 0.83 -0.2 4,142,098 - Echvi_3495 0.83 -1.3 4,142,098 - Echvi_3495 0.83 -0.2 4,142,102 + Echvi_3495 0.83 -0.9 4,142,102 + Echvi_3495 0.83 -0.1 4,142,103 - Echvi_3495 0.83 +1.0 4,142,106 + Echvi_3495 0.84 +0.8 4,142,206 + -1.9 4,142,207 - +0.7 4,142,269 + -0.8 4,142,321 + -1.4 4,142,370 + +0.6 4,142,376 + -1.9 4,142,376 + -1.7 4,142,376 + -1.9 4,142,383 + +0.1 4,142,390 + -1.1 4,142,443 + +0.7 4,142,443 + +0.8 4,142,444 - -0.2 4,142,444 - -1.0 4,142,444 - -1.1 4,142,445 + +0.4 4,142,445 + -0.2 4,142,445 + -1.8 4,142,446 - +0.2 4,142,463 + +1.1 4,142,467 + +0.7 4,142,468 - +0.5 4,142,616 - Echvi_3496 0.12 +0.4 4,142,625 + Echvi_3496 0.13 +0.3 4,142,626 - Echvi_3496 0.13 -0.7 4,142,626 - Echvi_3496 0.13 -1.0 4,142,684 - Echvi_3496 0.16 -2.4 4,142,727 + Echvi_3496 0.18 -0.1 4,142,749 + Echvi_3496 0.19 -0.6 4,142,778 - Echvi_3496 0.21 -0.7 4,142,783 - Echvi_3496 0.21 -2.1 4,142,806 + Echvi_3496 0.23 -0.9 4,142,806 + Echvi_3496 0.23 +0.4 4,142,807 - Echvi_3496 0.23 -0.6 4,142,807 - Echvi_3496 0.23 -0.1 4,142,807 - Echvi_3496 0.23 -0.2 4,142,868 + Echvi_3496 0.26 -0.3 4,142,885 + Echvi_3496 0.27 -1.0 4,142,886 - Echvi_3496 0.27 +1.9 4,142,886 - Echvi_3496 0.27 -1.4 4,142,895 - Echvi_3496 0.27 -1.2 4,142,955 - Echvi_3496 0.31 +0.3 4,142,968 + Echvi_3496 0.31 -1.0 4,142,972 + Echvi_3496 0.31 +0.1 4,142,973 - +1.6 4,143,010 - Echvi_3496 0.34 -0.9 4,143,032 - Echvi_3496 0.35 +0.8 4,143,032 - Echvi_3496 0.35 -1.7 4,143,077 + Echvi_3496 0.37 -0.1 4,143,103 - Echvi_3496 0.39 +2.1 4,143,159 + Echvi_3496 0.42 -1.3 4,143,159 + Echvi_3496 0.42 +0.7 4,143,159 + Echvi_3496 0.42 -0.2 4,143,159 + Echvi_3496 0.42 -0.8 4,143,159 + Echvi_3496 0.42 -0.3 4,143,159 + Echvi_3496 0.42 +1.1 4,143,159 + Echvi_3496 0.42 +0.6 4,143,159 + Echvi_3496 0.42 -0.4 4,143,160 - Echvi_3496 0.42 +0.4 4,143,160 - Echvi_3496 0.42 -0.6 4,143,160 - Echvi_3496 0.42 +0.9 4,143,160 - Echvi_3496 0.42 -0.4 4,143,198 - Echvi_3496 0.44 -0.9
Or see this region's nucleotide sequence