Experiment: m.b. Thallium(I) acetate 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2906 and Echvi_2907 are separated by 616 nucleotides Echvi_2907 and Echvi_2908 are separated by 55 nucleotides Echvi_2908 and Echvi_2909 are separated by 338 nucleotides
Echvi_2906: Echvi_2906 - hypothetical protein, at 3,482,618 to 3,482,884
_2906
Echvi_2907: Echvi_2907 - tRNA, at 3,483,501 to 3,483,577
_2907
Echvi_2908: Echvi_2908 - succinyl-CoA synthetase, beta subunit, at 3,483,633 to 3,484,850
_2908
Echvi_2909: Echvi_2909 - ABC-type antimicrobial peptide transport system, ATPase component, at 3,485,189 to 3,485,845
_2909
Position (kb)
3483
3484
3485 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3482.670 kb on + strand, within Echvi_2906 at 3482.675 kb on - strand, within Echvi_2906 at 3482.694 kb on + strand, within Echvi_2906 at 3482.710 kb on + strand, within Echvi_2906 at 3482.710 kb on + strand, within Echvi_2906 at 3482.719 kb on + strand, within Echvi_2906 at 3482.720 kb on - strand, within Echvi_2906 at 3482.720 kb on - strand at 3482.720 kb on - strand, within Echvi_2906 at 3482.753 kb on + strand, within Echvi_2906 at 3482.774 kb on + strand, within Echvi_2906 at 3482.774 kb on + strand, within Echvi_2906 at 3482.779 kb on + strand, within Echvi_2906 at 3482.779 kb on + strand, within Echvi_2906 at 3482.779 kb on + strand, within Echvi_2906 at 3482.779 kb on + strand, within Echvi_2906 at 3482.780 kb on - strand, within Echvi_2906 at 3482.780 kb on - strand, within Echvi_2906 at 3482.780 kb on - strand, within Echvi_2906 at 3482.901 kb on + strand at 3482.990 kb on + strand at 3483.029 kb on - strand at 3483.029 kb on - strand at 3483.077 kb on + strand at 3483.092 kb on - strand at 3483.092 kb on - strand at 3483.092 kb on - strand at 3483.182 kb on - strand at 3483.223 kb on + strand at 3483.239 kb on - strand at 3483.243 kb on - strand at 3483.440 kb on + strand at 3483.441 kb on - strand at 3483.622 kb on - strand at 3483.622 kb on - strand at 3483.622 kb on - strand at 3483.684 kb on + strand at 3483.794 kb on + strand, within Echvi_2908 at 3483.805 kb on - strand, within Echvi_2908 at 3483.834 kb on - strand, within Echvi_2908 at 3483.871 kb on - strand, within Echvi_2908 at 3483.917 kb on + strand, within Echvi_2908 at 3483.936 kb on + strand, within Echvi_2908 at 3483.937 kb on - strand, within Echvi_2908 at 3483.937 kb on - strand, within Echvi_2908 at 3483.951 kb on - strand, within Echvi_2908 at 3484.049 kb on - strand, within Echvi_2908 at 3484.049 kb on - strand, within Echvi_2908 at 3484.075 kb on - strand, within Echvi_2908 at 3484.167 kb on + strand, within Echvi_2908 at 3484.233 kb on - strand, within Echvi_2908 at 3484.241 kb on - strand, within Echvi_2908 at 3484.322 kb on + strand, within Echvi_2908 at 3484.474 kb on - strand, within Echvi_2908 at 3484.474 kb on - strand, within Echvi_2908 at 3484.474 kb on - strand, within Echvi_2908 at 3484.478 kb on - strand, within Echvi_2908 at 3484.478 kb on - strand, within Echvi_2908 at 3484.478 kb on - strand, within Echvi_2908 at 3484.507 kb on + strand, within Echvi_2908 at 3484.511 kb on - strand, within Echvi_2908 at 3484.511 kb on - strand, within Echvi_2908 at 3484.588 kb on - strand, within Echvi_2908 at 3484.712 kb on - strand, within Echvi_2908 at 3484.844 kb on + strand at 3484.905 kb on + strand at 3484.906 kb on - strand at 3485.047 kb on + strand at 3485.047 kb on + strand at 3485.048 kb on - strand at 3485.053 kb on - strand at 3485.188 kb on + strand at 3485.188 kb on + strand at 3485.188 kb on + strand at 3485.188 kb on + strand at 3485.844 kb on - strand at 3485.847 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.01 mg/ml remove 3,482,670 + Echvi_2906 0.19 +0.5 3,482,675 - Echvi_2906 0.21 -0.2 3,482,694 + Echvi_2906 0.28 +0.7 3,482,710 + Echvi_2906 0.34 -0.6 3,482,710 + Echvi_2906 0.34 -0.9 3,482,719 + Echvi_2906 0.38 -0.4 3,482,720 - Echvi_2906 0.38 +0.9 3,482,720 - +3.4 3,482,720 - Echvi_2906 0.38 +0.1 3,482,753 + Echvi_2906 0.51 -1.1 3,482,774 + Echvi_2906 0.58 +2.7 3,482,774 + Echvi_2906 0.58 +1.2 3,482,779 + Echvi_2906 0.60 -2.2 3,482,779 + Echvi_2906 0.60 -1.5 3,482,779 + Echvi_2906 0.60 -0.5 3,482,779 + Echvi_2906 0.60 +0.3 3,482,780 - Echvi_2906 0.61 +2.0 3,482,780 - Echvi_2906 0.61 -0.3 3,482,780 - Echvi_2906 0.61 -1.5 3,482,901 + -3.4 3,482,990 + +0.9 3,483,029 - +1.2 3,483,029 - -0.2 3,483,077 + -0.2 3,483,092 - +0.6 3,483,092 - +0.8 3,483,092 - +0.8 3,483,182 - +1.1 3,483,223 + +0.7 3,483,239 - -0.2 3,483,243 - -0.2 3,483,440 + -0.3 3,483,441 - +0.0 3,483,622 - +0.5 3,483,622 - -1.3 3,483,622 - -0.6 3,483,684 + +0.5 3,483,794 + Echvi_2908 0.13 +1.3 3,483,805 - Echvi_2908 0.14 +2.2 3,483,834 - Echvi_2908 0.17 -0.9 3,483,871 - Echvi_2908 0.20 +1.3 3,483,917 + Echvi_2908 0.23 -1.6 3,483,936 + Echvi_2908 0.25 +0.3 3,483,937 - Echvi_2908 0.25 +0.6 3,483,937 - Echvi_2908 0.25 -0.4 3,483,951 - Echvi_2908 0.26 -1.2 3,484,049 - Echvi_2908 0.34 -0.8 3,484,049 - Echvi_2908 0.34 -1.2 3,484,075 - Echvi_2908 0.36 -2.5 3,484,167 + Echvi_2908 0.44 -0.1 3,484,233 - Echvi_2908 0.49 +1.3 3,484,241 - Echvi_2908 0.50 -1.1 3,484,322 + Echvi_2908 0.57 -1.4 3,484,474 - Echvi_2908 0.69 -1.2 3,484,474 - Echvi_2908 0.69 -1.5 3,484,474 - Echvi_2908 0.69 -0.5 3,484,478 - Echvi_2908 0.69 -2.3 3,484,478 - Echvi_2908 0.69 -2.2 3,484,478 - Echvi_2908 0.69 -2.3 3,484,507 + Echvi_2908 0.72 -0.2 3,484,511 - Echvi_2908 0.72 +1.5 3,484,511 - Echvi_2908 0.72 -0.1 3,484,588 - Echvi_2908 0.78 +0.9 3,484,712 - Echvi_2908 0.89 -1.5 3,484,844 + +0.2 3,484,905 + +1.8 3,484,906 - -0.4 3,485,047 + -1.3 3,485,047 + -0.7 3,485,048 - -0.5 3,485,053 - -0.6 3,485,188 + +0.6 3,485,188 + -0.3 3,485,188 + +2.1 3,485,188 + +0.6 3,485,844 - +0.5 3,485,847 - -0.4
Or see this region's nucleotide sequence