Experiment: m.b. Thallium(I) acetate 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1126 and Echvi_1127 are separated by 22 nucleotides Echvi_1127 and Echvi_1128 are separated by 116 nucleotides Echvi_1128 and Echvi_1129 are separated by 39 nucleotides
Echvi_1126: Echvi_1126 - Heat shock protein, at 1,288,178 to 1,289,239
_1126
Echvi_1127: Echvi_1127 - hypothetical protein, at 1,289,262 to 1,289,798
_1127
Echvi_1128: Echvi_1128 - hypothetical protein, at 1,289,915 to 1,290,601
_1128
Echvi_1129: Echvi_1129 - PIF1 helicase., at 1,290,641 to 1,292,236
_1129
Position (kb)
1289
1290 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1288.308 kb on - strand, within Echvi_1126 at 1288.308 kb on - strand, within Echvi_1126 at 1288.316 kb on - strand, within Echvi_1126 at 1288.419 kb on + strand, within Echvi_1126 at 1288.422 kb on + strand, within Echvi_1126 at 1288.535 kb on + strand, within Echvi_1126 at 1288.535 kb on + strand, within Echvi_1126 at 1288.538 kb on + strand, within Echvi_1126 at 1288.539 kb on - strand, within Echvi_1126 at 1288.539 kb on - strand, within Echvi_1126 at 1288.594 kb on + strand, within Echvi_1126 at 1288.595 kb on - strand, within Echvi_1126 at 1288.595 kb on - strand, within Echvi_1126 at 1288.597 kb on - strand, within Echvi_1126 at 1288.597 kb on - strand, within Echvi_1126 at 1288.666 kb on + strand, within Echvi_1126 at 1288.742 kb on + strand, within Echvi_1126 at 1288.776 kb on + strand, within Echvi_1126 at 1288.776 kb on + strand, within Echvi_1126 at 1288.777 kb on - strand, within Echvi_1126 at 1288.830 kb on - strand, within Echvi_1126 at 1288.848 kb on + strand, within Echvi_1126 at 1288.848 kb on + strand, within Echvi_1126 at 1288.849 kb on - strand, within Echvi_1126 at 1288.849 kb on - strand, within Echvi_1126 at 1288.880 kb on + strand, within Echvi_1126 at 1288.880 kb on + strand, within Echvi_1126 at 1288.880 kb on + strand, within Echvi_1126 at 1288.882 kb on + strand, within Echvi_1126 at 1288.883 kb on - strand, within Echvi_1126 at 1288.883 kb on - strand, within Echvi_1126 at 1288.883 kb on - strand, within Echvi_1126 at 1288.918 kb on - strand, within Echvi_1126 at 1288.972 kb on + strand, within Echvi_1126 at 1288.973 kb on - strand, within Echvi_1126 at 1288.973 kb on - strand, within Echvi_1126 at 1288.973 kb on - strand, within Echvi_1126 at 1289.035 kb on + strand, within Echvi_1126 at 1289.118 kb on + strand, within Echvi_1126 at 1289.139 kb on + strand at 1289.139 kb on + strand at 1289.146 kb on + strand at 1289.147 kb on - strand at 1289.147 kb on - strand at 1289.147 kb on - strand at 1289.149 kb on + strand at 1289.150 kb on - strand at 1289.170 kb on + strand at 1289.171 kb on - strand at 1289.212 kb on + strand at 1289.212 kb on + strand at 1289.212 kb on + strand at 1289.212 kb on + strand at 1289.213 kb on - strand at 1289.213 kb on - strand at 1289.213 kb on - strand at 1289.213 kb on - strand at 1289.221 kb on - strand at 1289.237 kb on + strand at 1289.237 kb on + strand at 1289.237 kb on + strand at 1289.237 kb on + strand at 1289.237 kb on + strand at 1289.238 kb on - strand at 1289.303 kb on + strand at 1289.303 kb on + strand at 1289.304 kb on - strand at 1289.371 kb on + strand, within Echvi_1127 at 1289.371 kb on + strand, within Echvi_1127 at 1289.439 kb on + strand, within Echvi_1127 at 1289.439 kb on + strand, within Echvi_1127 at 1289.440 kb on - strand, within Echvi_1127 at 1289.465 kb on - strand, within Echvi_1127 at 1289.527 kb on + strand, within Echvi_1127 at 1289.527 kb on + strand, within Echvi_1127 at 1289.527 kb on + strand, within Echvi_1127 at 1289.527 kb on + strand, within Echvi_1127 at 1289.528 kb on - strand, within Echvi_1127 at 1289.670 kb on - strand, within Echvi_1127 at 1289.670 kb on - strand, within Echvi_1127 at 1289.672 kb on - strand, within Echvi_1127 at 1289.760 kb on + strand at 1289.790 kb on + strand at 1289.790 kb on + strand at 1289.790 kb on + strand at 1289.791 kb on - strand at 1289.811 kb on + strand at 1289.811 kb on + strand at 1289.811 kb on + strand at 1289.811 kb on + strand at 1289.812 kb on - strand at 1289.841 kb on - strand at 1289.850 kb on - strand at 1289.916 kb on + strand at 1289.916 kb on + strand at 1289.917 kb on - strand at 1289.917 kb on - strand at 1289.917 kb on - strand at 1289.917 kb on - strand at 1289.918 kb on + strand at 1290.000 kb on + strand, within Echvi_1128 at 1290.000 kb on + strand, within Echvi_1128 at 1290.001 kb on - strand, within Echvi_1128 at 1290.053 kb on + strand, within Echvi_1128 at 1290.053 kb on + strand, within Echvi_1128 at 1290.086 kb on + strand, within Echvi_1128 at 1290.087 kb on - strand, within Echvi_1128 at 1290.163 kb on - strand, within Echvi_1128 at 1290.280 kb on - strand, within Echvi_1128 at 1290.280 kb on - strand, within Echvi_1128 at 1290.280 kb on - strand, within Echvi_1128 at 1290.358 kb on - strand, within Echvi_1128 at 1290.358 kb on - strand, within Echvi_1128 at 1290.358 kb on - strand, within Echvi_1128 at 1290.375 kb on + strand, within Echvi_1128 at 1290.376 kb on - strand, within Echvi_1128 at 1290.391 kb on - strand, within Echvi_1128 at 1290.443 kb on - strand, within Echvi_1128 at 1290.463 kb on - strand, within Echvi_1128 at 1290.488 kb on + strand, within Echvi_1128 at 1290.488 kb on + strand, within Echvi_1128 at 1290.489 kb on - strand, within Echvi_1128 at 1290.489 kb on - strand, within Echvi_1128 at 1290.494 kb on - strand, within Echvi_1128 at 1290.497 kb on + strand, within Echvi_1128 at 1290.497 kb on + strand, within Echvi_1128 at 1290.497 kb on + strand, within Echvi_1128 at 1290.498 kb on - strand, within Echvi_1128 at 1290.498 kb on - strand, within Echvi_1128 at 1290.536 kb on - strand at 1290.578 kb on + strand at 1290.579 kb on - strand at 1290.611 kb on + strand at 1290.611 kb on + strand at 1290.611 kb on + strand at 1290.612 kb on - strand at 1290.612 kb on - strand at 1290.642 kb on + strand at 1290.668 kb on + strand at 1290.681 kb on - strand at 1290.687 kb on - strand at 1290.765 kb on + strand at 1290.765 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.01 mg/ml remove 1,288,308 - Echvi_1126 0.12 +0.3 1,288,308 - Echvi_1126 0.12 +0.5 1,288,316 - Echvi_1126 0.13 -1.5 1,288,419 + Echvi_1126 0.23 -1.6 1,288,422 + Echvi_1126 0.23 +0.6 1,288,535 + Echvi_1126 0.34 -0.1 1,288,535 + Echvi_1126 0.34 +1.6 1,288,538 + Echvi_1126 0.34 -2.7 1,288,539 - Echvi_1126 0.34 +1.0 1,288,539 - Echvi_1126 0.34 -2.2 1,288,594 + Echvi_1126 0.39 +1.8 1,288,595 - Echvi_1126 0.39 -0.9 1,288,595 - Echvi_1126 0.39 +0.7 1,288,597 - Echvi_1126 0.39 +0.3 1,288,597 - Echvi_1126 0.39 -1.0 1,288,666 + Echvi_1126 0.46 -1.3 1,288,742 + Echvi_1126 0.53 +0.6 1,288,776 + Echvi_1126 0.56 +1.2 1,288,776 + Echvi_1126 0.56 +0.2 1,288,777 - Echvi_1126 0.56 +1.5 1,288,830 - Echvi_1126 0.61 +0.1 1,288,848 + Echvi_1126 0.63 +0.3 1,288,848 + Echvi_1126 0.63 -0.3 1,288,849 - Echvi_1126 0.63 +0.6 1,288,849 - Echvi_1126 0.63 +0.8 1,288,880 + Echvi_1126 0.66 -1.3 1,288,880 + Echvi_1126 0.66 -0.5 1,288,880 + Echvi_1126 0.66 -0.2 1,288,882 + Echvi_1126 0.66 +1.1 1,288,883 - Echvi_1126 0.66 -0.3 1,288,883 - Echvi_1126 0.66 -2.1 1,288,883 - Echvi_1126 0.66 -1.3 1,288,918 - Echvi_1126 0.70 -0.9 1,288,972 + Echvi_1126 0.75 -0.0 1,288,973 - Echvi_1126 0.75 +0.9 1,288,973 - Echvi_1126 0.75 +1.1 1,288,973 - Echvi_1126 0.75 -1.0 1,289,035 + Echvi_1126 0.81 -0.5 1,289,118 + Echvi_1126 0.89 +0.1 1,289,139 + -0.9 1,289,139 + -0.8 1,289,146 + +0.3 1,289,147 - +0.0 1,289,147 - +1.8 1,289,147 - +0.7 1,289,149 + -0.3 1,289,150 - +0.2 1,289,170 + -0.5 1,289,171 - -1.8 1,289,212 + -0.2 1,289,212 + +0.3 1,289,212 + +0.2 1,289,212 + -1.0 1,289,213 - +1.4 1,289,213 - -2.2 1,289,213 - -0.4 1,289,213 - -0.2 1,289,221 - -1.3 1,289,237 + -0.8 1,289,237 + +1.1 1,289,237 + -0.6 1,289,237 + +0.2 1,289,237 + -2.3 1,289,238 - -0.1 1,289,303 + +0.2 1,289,303 + +0.3 1,289,304 - +0.6 1,289,371 + Echvi_1127 0.20 -1.1 1,289,371 + Echvi_1127 0.20 -1.4 1,289,439 + Echvi_1127 0.33 +0.5 1,289,439 + Echvi_1127 0.33 -1.5 1,289,440 - Echvi_1127 0.33 -1.8 1,289,465 - Echvi_1127 0.38 -4.3 1,289,527 + Echvi_1127 0.49 -1.4 1,289,527 + Echvi_1127 0.49 -2.4 1,289,527 + Echvi_1127 0.49 -0.8 1,289,527 + Echvi_1127 0.49 +2.3 1,289,528 - Echvi_1127 0.50 -0.5 1,289,670 - Echvi_1127 0.76 +2.2 1,289,670 - Echvi_1127 0.76 -1.6 1,289,672 - Echvi_1127 0.76 +0.2 1,289,760 + -0.9 1,289,790 + +0.3 1,289,790 + -0.2 1,289,790 + -0.1 1,289,791 - +2.1 1,289,811 + +0.7 1,289,811 + -1.8 1,289,811 + -0.3 1,289,811 + +0.1 1,289,812 - -1.2 1,289,841 - +0.1 1,289,850 - +0.4 1,289,916 + -1.3 1,289,916 + -0.4 1,289,917 - -0.5 1,289,917 - +0.6 1,289,917 - -0.4 1,289,917 - -0.8 1,289,918 + +0.9 1,290,000 + Echvi_1128 0.12 -0.0 1,290,000 + Echvi_1128 0.12 -0.5 1,290,001 - Echvi_1128 0.13 +0.6 1,290,053 + Echvi_1128 0.20 -1.3 1,290,053 + Echvi_1128 0.20 -0.8 1,290,086 + Echvi_1128 0.25 +0.3 1,290,087 - Echvi_1128 0.25 +0.9 1,290,163 - Echvi_1128 0.36 +0.3 1,290,280 - Echvi_1128 0.53 -0.1 1,290,280 - Echvi_1128 0.53 -0.1 1,290,280 - Echvi_1128 0.53 -0.9 1,290,358 - Echvi_1128 0.64 -0.3 1,290,358 - Echvi_1128 0.64 +1.0 1,290,358 - Echvi_1128 0.64 -0.2 1,290,375 + Echvi_1128 0.67 +0.6 1,290,376 - Echvi_1128 0.67 -0.6 1,290,391 - Echvi_1128 0.69 +2.1 1,290,443 - Echvi_1128 0.77 +0.8 1,290,463 - Echvi_1128 0.80 +0.7 1,290,488 + Echvi_1128 0.83 -0.7 1,290,488 + Echvi_1128 0.83 -1.1 1,290,489 - Echvi_1128 0.84 -0.0 1,290,489 - Echvi_1128 0.84 -0.1 1,290,494 - Echvi_1128 0.84 -1.0 1,290,497 + Echvi_1128 0.85 -1.4 1,290,497 + Echvi_1128 0.85 -0.0 1,290,497 + Echvi_1128 0.85 +1.6 1,290,498 - Echvi_1128 0.85 -2.3 1,290,498 - Echvi_1128 0.85 +1.0 1,290,536 - +0.3 1,290,578 + +0.5 1,290,579 - -0.3 1,290,611 + -0.3 1,290,611 + +0.8 1,290,611 + -1.7 1,290,612 - +1.7 1,290,612 - +0.2 1,290,642 + -1.8 1,290,668 + +1.0 1,290,681 - +0.9 1,290,687 - +0.9 1,290,765 + -1.2 1,290,765 + +0.0
Or see this region's nucleotide sequence