Experiment: m.b. Thallium(I) acetate 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0122 and Echvi_0123 are separated by 115 nucleotides Echvi_0123 and Echvi_0124 are separated by 5 nucleotides
Echvi_0122: Echvi_0122 - 5-enolpyruvylshikimate-3-phosphate synthase, at 122,111 to 123,328
_0122
Echvi_0123: Echvi_0123 - prephenate and/or arogenate dehydratase (EC 4.2.1.51) (from data) , at 123,444 to 124,283
_0123
Echvi_0124: Echvi_0124 - Aspartate/tyrosine/aromatic aminotransferase, at 124,289 to 125,449
_0124
Position (kb)
123
124
125 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 123.315 kb on + strand at 123.429 kb on + strand at 123.472 kb on + strand at 123.499 kb on - strand at 123.499 kb on - strand at 123.499 kb on - strand at 123.654 kb on + strand, within Echvi_0123 at 123.654 kb on + strand, within Echvi_0123 at 123.655 kb on - strand, within Echvi_0123 at 123.688 kb on + strand, within Echvi_0123 at 123.688 kb on + strand, within Echvi_0123 at 123.689 kb on - strand, within Echvi_0123 at 123.689 kb on - strand, within Echvi_0123 at 123.689 kb on - strand, within Echvi_0123 at 123.689 kb on - strand, within Echvi_0123 at 123.722 kb on - strand, within Echvi_0123 at 123.954 kb on - strand, within Echvi_0123 at 123.995 kb on + strand, within Echvi_0123 at 124.025 kb on - strand, within Echvi_0123 at 124.164 kb on + strand, within Echvi_0123 at 124.199 kb on - strand, within Echvi_0123 at 124.329 kb on - strand at 124.347 kb on + strand at 124.347 kb on + strand at 124.491 kb on - strand, within Echvi_0124 at 124.614 kb on + strand, within Echvi_0124 at 124.625 kb on + strand, within Echvi_0124 at 124.647 kb on + strand, within Echvi_0124 at 124.672 kb on + strand, within Echvi_0124 at 124.673 kb on - strand, within Echvi_0124 at 124.673 kb on - strand, within Echvi_0124 at 124.676 kb on + strand, within Echvi_0124 at 124.677 kb on - strand, within Echvi_0124 at 124.677 kb on - strand, within Echvi_0124 at 124.808 kb on + strand, within Echvi_0124 at 124.808 kb on + strand, within Echvi_0124 at 124.809 kb on - strand, within Echvi_0124 at 124.809 kb on - strand, within Echvi_0124 at 124.911 kb on - strand, within Echvi_0124 at 124.948 kb on - strand, within Echvi_0124 at 124.977 kb on + strand, within Echvi_0124 at 125.005 kb on + strand, within Echvi_0124 at 125.055 kb on + strand, within Echvi_0124 at 125.067 kb on + strand, within Echvi_0124
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.01 mg/ml remove 123,315 + -0.2 123,429 + -0.5 123,472 + +0.5 123,499 - -1.8 123,499 - -0.3 123,499 - -0.1 123,654 + Echvi_0123 0.25 -0.0 123,654 + Echvi_0123 0.25 -1.1 123,655 - Echvi_0123 0.25 +0.6 123,688 + Echvi_0123 0.29 -0.4 123,688 + Echvi_0123 0.29 +0.1 123,689 - Echvi_0123 0.29 -2.8 123,689 - Echvi_0123 0.29 -0.7 123,689 - Echvi_0123 0.29 -1.5 123,689 - Echvi_0123 0.29 -1.3 123,722 - Echvi_0123 0.33 -1.0 123,954 - Echvi_0123 0.61 +0.3 123,995 + Echvi_0123 0.66 -1.1 124,025 - Echvi_0123 0.69 +0.7 124,164 + Echvi_0123 0.86 +0.2 124,199 - Echvi_0123 0.90 +0.1 124,329 - +0.2 124,347 + -1.0 124,347 + +1.5 124,491 - Echvi_0124 0.17 +0.9 124,614 + Echvi_0124 0.28 -0.7 124,625 + Echvi_0124 0.29 -0.8 124,647 + Echvi_0124 0.31 +0.5 124,672 + Echvi_0124 0.33 -0.2 124,673 - Echvi_0124 0.33 -0.5 124,673 - Echvi_0124 0.33 +1.8 124,676 + Echvi_0124 0.33 +1.5 124,677 - Echvi_0124 0.33 +0.9 124,677 - Echvi_0124 0.33 +0.8 124,808 + Echvi_0124 0.45 -0.5 124,808 + Echvi_0124 0.45 -0.5 124,809 - Echvi_0124 0.45 +0.7 124,809 - Echvi_0124 0.45 +0.7 124,911 - Echvi_0124 0.54 -1.8 124,948 - Echvi_0124 0.57 -2.0 124,977 + Echvi_0124 0.59 -0.1 125,005 + Echvi_0124 0.62 -0.5 125,055 + Echvi_0124 0.66 +0.6 125,067 + Echvi_0124 0.67 +0.1
Or see this region's nucleotide sequence