Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_0757

Experiment: M9 with casaminos and trichloroethylene 76.3 uM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_0755 and EX28DRAFT_0756 are separated by 75 nucleotidesEX28DRAFT_0756 and EX28DRAFT_0757 are separated by 3 nucleotidesEX28DRAFT_0757 and EX28DRAFT_0758 are separated by 23 nucleotidesEX28DRAFT_0758 and EX28DRAFT_0759 are separated by 123 nucleotides EX28DRAFT_0755: EX28DRAFT_0755 - ribonuclease D, at 752,753 to 753,880 _0755 EX28DRAFT_0756: EX28DRAFT_0756 - cell division topological specificity factor MinE, at 753,956 to 754,225 _0756 EX28DRAFT_0757: EX28DRAFT_0757 - septum site-determining protein MinD, at 754,229 to 755,041 _0757 EX28DRAFT_0758: EX28DRAFT_0758 - septum site-determining protein MinC, at 755,065 to 755,772 _0758 EX28DRAFT_0759: EX28DRAFT_0759 - Uncharacterized protein conserved in bacteria, at 755,896 to 756,171 _0759 Position (kb) 754 755 756Strain fitness (log2 ratio) -2 -1 0 1 2at 753.383 kb on - strand, within EX28DRAFT_0755at 753.501 kb on - strand, within EX28DRAFT_0755at 753.502 kb on + strand, within EX28DRAFT_0755at 753.853 kb on + strandat 753.901 kb on - strandat 753.910 kb on - strandat 754.352 kb on - strand, within EX28DRAFT_0757at 754.427 kb on - strand, within EX28DRAFT_0757at 754.791 kb on + strand, within EX28DRAFT_0757at 754.859 kb on + strand, within EX28DRAFT_0757at 755.030 kb on - strandat 755.206 kb on + strand, within EX28DRAFT_0758at 755.264 kb on + strand, within EX28DRAFT_0758at 755.267 kb on - strand, within EX28DRAFT_0758at 755.319 kb on + strand, within EX28DRAFT_0758at 755.550 kb on + strand, within EX28DRAFT_0758at 755.728 kb on + strandat 755.739 kb on + strandat 755.794 kb on - strandat 755.797 kb on - strandat 755.844 kb on + strandat 755.845 kb on - strandat 755.856 kb on + strandat 755.912 kb on - strandat 755.919 kb on + strandat 755.938 kb on + strand, within EX28DRAFT_0759at 755.944 kb on + strand, within EX28DRAFT_0759at 755.945 kb on - strand, within EX28DRAFT_0759at 755.988 kb on - strand, within EX28DRAFT_0759

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 with casaminos and trichloroethylene 76.3 uM
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753,383 - EX28DRAFT_0755 0.56 -1.8
753,501 - EX28DRAFT_0755 0.66 +0.7
753,502 + EX28DRAFT_0755 0.66 +0.0
753,853 + +0.1
753,901 - -0.7
753,910 - +0.1
754,352 - EX28DRAFT_0757 0.15 -1.7
754,427 - EX28DRAFT_0757 0.24 -1.1
754,791 + EX28DRAFT_0757 0.69 -0.9
754,859 + EX28DRAFT_0757 0.77 -0.2
755,030 - -0.6
755,206 + EX28DRAFT_0758 0.20 +1.4
755,264 + EX28DRAFT_0758 0.28 -1.3
755,267 - EX28DRAFT_0758 0.29 -0.5
755,319 + EX28DRAFT_0758 0.36 +2.3
755,550 + EX28DRAFT_0758 0.69 -0.3
755,728 + -1.5
755,739 + -0.4
755,794 - +0.4
755,797 - +0.6
755,844 + -0.7
755,845 - -0.3
755,856 + +0.2
755,912 - +0.3
755,919 + -0.3
755,938 + EX28DRAFT_0759 0.15 -0.3
755,944 + EX28DRAFT_0759 0.17 -0.8
755,945 - EX28DRAFT_0759 0.18 -1.2
755,988 - EX28DRAFT_0759 0.33 +0.5

Or see this region's nucleotide sequence