Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_21025 and CA264_21030 are separated by 35 nucleotides CA264_21030 and CA264_21035 are separated by 104 nucleotides CA264_21035 and CA264_21040 overlap by 4 nucleotides
CA264_21025: CA264_21025 - conjugative transposon protein TraN, at 66,357 to 67,145
_21025
CA264_21030: CA264_21030 - hypothetical protein, at 67,181 to 67,600
_21030
CA264_21035: CA264_21035 - mobilization protein, at 67,705 to 69,672
_21035
CA264_21040: CA264_21040 - transcriptional regulator, at 69,669 to 70,019
_21040
Position (kb)
67
68
69
70 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 66.771 kb on - strand, within CA264_21025 at 66.771 kb on - strand, within CA264_21025 at 66.819 kb on + strand, within CA264_21025 at 66.819 kb on + strand, within CA264_21025 at 66.819 kb on + strand, within CA264_21025 at 66.819 kb on + strand, within CA264_21025 at 66.820 kb on - strand, within CA264_21025 at 66.820 kb on - strand, within CA264_21025 at 66.822 kb on - strand, within CA264_21025 at 66.851 kb on - strand, within CA264_21025 at 66.857 kb on + strand, within CA264_21025 at 66.881 kb on + strand, within CA264_21025 at 67.114 kb on - strand at 67.141 kb on + strand at 67.142 kb on - strand at 67.176 kb on + strand at 67.181 kb on - strand at 67.209 kb on - strand at 67.293 kb on - strand, within CA264_21030 at 67.322 kb on + strand, within CA264_21030 at 67.325 kb on - strand, within CA264_21030 at 67.371 kb on - strand, within CA264_21030 at 67.455 kb on + strand, within CA264_21030 at 67.456 kb on - strand, within CA264_21030 at 67.456 kb on - strand, within CA264_21030 at 67.539 kb on + strand, within CA264_21030 at 67.540 kb on - strand, within CA264_21030 at 67.540 kb on - strand, within CA264_21030 at 67.668 kb on + strand at 67.668 kb on + strand at 67.668 kb on + strand at 67.676 kb on - strand at 67.695 kb on - strand at 67.704 kb on + strand at 67.755 kb on + strand at 67.756 kb on - strand at 67.768 kb on - strand at 67.781 kb on + strand at 67.782 kb on - strand at 67.782 kb on - strand at 67.782 kb on - strand at 67.782 kb on - strand at 67.782 kb on - strand at 67.798 kb on - strand at 67.812 kb on + strand at 67.812 kb on + strand at 67.813 kb on - strand at 67.816 kb on + strand at 67.816 kb on + strand at 67.817 kb on - strand at 67.845 kb on - strand at 67.845 kb on - strand at 67.861 kb on + strand at 67.861 kb on + strand at 67.874 kb on - strand at 67.874 kb on - strand at 67.874 kb on - strand at 67.874 kb on - strand at 67.965 kb on + strand, within CA264_21035 at 68.077 kb on + strand, within CA264_21035 at 68.077 kb on + strand, within CA264_21035 at 68.077 kb on + strand, within CA264_21035 at 68.117 kb on + strand, within CA264_21035 at 68.118 kb on - strand, within CA264_21035 at 68.118 kb on - strand, within CA264_21035 at 68.142 kb on + strand, within CA264_21035 at 68.143 kb on - strand, within CA264_21035 at 68.144 kb on + strand, within CA264_21035 at 68.145 kb on - strand, within CA264_21035 at 68.248 kb on + strand, within CA264_21035 at 68.248 kb on + strand, within CA264_21035 at 68.248 kb on + strand, within CA264_21035 at 68.248 kb on + strand, within CA264_21035 at 68.248 kb on + strand, within CA264_21035 at 68.249 kb on - strand, within CA264_21035 at 68.251 kb on + strand, within CA264_21035 at 68.251 kb on + strand, within CA264_21035 at 68.394 kb on + strand, within CA264_21035 at 68.394 kb on + strand, within CA264_21035 at 68.394 kb on + strand, within CA264_21035 at 68.413 kb on - strand, within CA264_21035 at 68.413 kb on - strand, within CA264_21035 at 68.440 kb on + strand, within CA264_21035 at 68.443 kb on + strand, within CA264_21035 at 68.449 kb on + strand, within CA264_21035 at 68.461 kb on - strand, within CA264_21035 at 68.554 kb on + strand, within CA264_21035 at 68.686 kb on + strand, within CA264_21035 at 68.735 kb on + strand, within CA264_21035 at 68.736 kb on - strand, within CA264_21035 at 68.749 kb on - strand, within CA264_21035 at 68.758 kb on + strand, within CA264_21035 at 68.758 kb on + strand, within CA264_21035 at 68.759 kb on - strand, within CA264_21035 at 68.830 kb on + strand, within CA264_21035 at 68.830 kb on + strand, within CA264_21035 at 68.830 kb on + strand, within CA264_21035 at 68.830 kb on + strand, within CA264_21035 at 68.831 kb on - strand, within CA264_21035 at 68.832 kb on + strand, within CA264_21035 at 68.832 kb on + strand, within CA264_21035 at 68.833 kb on - strand, within CA264_21035 at 68.883 kb on + strand, within CA264_21035 at 69.109 kb on - strand, within CA264_21035 at 69.115 kb on + strand, within CA264_21035 at 69.116 kb on - strand, within CA264_21035 at 69.116 kb on - strand, within CA264_21035 at 69.119 kb on + strand, within CA264_21035 at 69.119 kb on + strand, within CA264_21035 at 69.119 kb on + strand, within CA264_21035 at 69.120 kb on - strand, within CA264_21035 at 69.120 kb on - strand, within CA264_21035 at 69.164 kb on + strand, within CA264_21035 at 69.164 kb on + strand, within CA264_21035 at 69.164 kb on + strand, within CA264_21035 at 69.164 kb on + strand, within CA264_21035 at 69.165 kb on - strand, within CA264_21035 at 69.192 kb on - strand, within CA264_21035 at 69.257 kb on + strand, within CA264_21035 at 69.258 kb on - strand, within CA264_21035 at 69.279 kb on + strand, within CA264_21035 at 69.315 kb on + strand, within CA264_21035 at 69.361 kb on - strand, within CA264_21035 at 69.449 kb on + strand, within CA264_21035 at 69.449 kb on + strand, within CA264_21035 at 69.469 kb on + strand, within CA264_21035 at 69.469 kb on + strand, within CA264_21035 at 69.470 kb on - strand, within CA264_21035 at 69.481 kb on + strand at 69.481 kb on + strand at 69.530 kb on + strand at 69.550 kb on + strand at 69.631 kb on - strand at 69.662 kb on + strand at 69.669 kb on - strand at 69.676 kb on + strand at 69.682 kb on + strand at 69.778 kb on + strand, within CA264_21040 at 69.823 kb on + strand, within CA264_21040 at 69.823 kb on + strand, within CA264_21040 at 69.997 kb on + strand at 70.017 kb on + strand at 70.018 kb on - strand at 70.051 kb on - strand at 70.060 kb on + strand at 70.063 kb on + strand at 70.063 kb on + strand at 70.065 kb on + strand at 70.160 kb on - strand at 70.199 kb on - strand at 70.343 kb on + strand at 70.343 kb on + strand at 70.344 kb on - strand at 70.361 kb on - strand at 70.370 kb on + strand at 70.370 kb on + strand at 70.391 kb on + strand at 70.399 kb on + strand at 70.400 kb on - strand at 70.402 kb on - strand at 70.420 kb on - strand at 70.458 kb on - strand at 70.500 kb on + strand at 70.500 kb on + strand at 70.500 kb on + strand at 70.515 kb on + strand at 70.533 kb on - strand at 70.571 kb on - strand at 70.574 kb on - strand at 70.579 kb on + strand at 70.581 kb on + strand at 70.582 kb on - strand at 70.582 kb on - strand at 70.582 kb on - strand at 70.585 kb on + strand at 70.585 kb on + strand at 70.586 kb on - strand at 70.586 kb on - strand at 70.586 kb on - strand at 70.587 kb on + strand at 70.587 kb on + strand at 70.587 kb on + strand at 70.588 kb on - strand at 70.588 kb on - strand at 70.631 kb on - strand at 70.631 kb on - strand at 70.634 kb on + strand at 70.635 kb on - strand at 70.635 kb on - strand at 70.638 kb on - strand at 70.638 kb on - strand at 70.641 kb on + strand at 70.641 kb on + strand at 70.642 kb on - strand at 70.671 kb on + strand at 70.671 kb on + strand at 70.672 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 66,771 - CA264_21025 0.52 -0.3 66,771 - CA264_21025 0.52 +0.2 66,819 + CA264_21025 0.59 -0.1 66,819 + CA264_21025 0.59 +0.3 66,819 + CA264_21025 0.59 +0.0 66,819 + CA264_21025 0.59 +0.7 66,820 - CA264_21025 0.59 -0.9 66,820 - CA264_21025 0.59 +0.5 66,822 - CA264_21025 0.59 +0.1 66,851 - CA264_21025 0.63 +0.0 66,857 + CA264_21025 0.63 +1.3 66,881 + CA264_21025 0.66 -0.1 67,114 - -0.3 67,141 + +2.0 67,142 - +0.3 67,176 + -0.3 67,181 - -0.2 67,209 - -1.2 67,293 - CA264_21030 0.27 +1.0 67,322 + CA264_21030 0.34 -0.2 67,325 - CA264_21030 0.34 -0.1 67,371 - CA264_21030 0.45 +0.6 67,455 + CA264_21030 0.65 -0.2 67,456 - CA264_21030 0.65 -0.5 67,456 - CA264_21030 0.65 -0.3 67,539 + CA264_21030 0.85 +0.8 67,540 - CA264_21030 0.85 -0.2 67,540 - CA264_21030 0.85 -0.3 67,668 + -0.0 67,668 + +0.3 67,668 + -1.4 67,676 - +0.4 67,695 - -0.4 67,704 + +0.0 67,755 + +0.0 67,756 - +1.1 67,768 - +1.0 67,781 + +0.6 67,782 - -1.0 67,782 - -0.6 67,782 - +0.6 67,782 - +1.7 67,782 - +1.3 67,798 - -0.4 67,812 + -0.8 67,812 + +0.4 67,813 - -0.8 67,816 + -0.2 67,816 + +0.3 67,817 - -0.6 67,845 - -0.3 67,845 - +1.3 67,861 + -0.1 67,861 + +0.9 67,874 - -1.1 67,874 - -1.0 67,874 - -0.6 67,874 - -0.0 67,965 + CA264_21035 0.13 +0.6 68,077 + CA264_21035 0.19 -0.5 68,077 + CA264_21035 0.19 +0.8 68,077 + CA264_21035 0.19 +0.1 68,117 + CA264_21035 0.21 +0.3 68,118 - CA264_21035 0.21 -0.4 68,118 - CA264_21035 0.21 +0.7 68,142 + CA264_21035 0.22 -0.4 68,143 - CA264_21035 0.22 -0.2 68,144 + CA264_21035 0.22 +1.4 68,145 - CA264_21035 0.22 +0.4 68,248 + CA264_21035 0.28 +1.9 68,248 + CA264_21035 0.28 -0.3 68,248 + CA264_21035 0.28 +1.2 68,248 + CA264_21035 0.28 -0.2 68,248 + CA264_21035 0.28 +0.9 68,249 - CA264_21035 0.28 -0.1 68,251 + CA264_21035 0.28 +0.4 68,251 + CA264_21035 0.28 +0.4 68,394 + CA264_21035 0.35 +0.1 68,394 + CA264_21035 0.35 -0.5 68,394 + CA264_21035 0.35 -0.2 68,413 - CA264_21035 0.36 -0.8 68,413 - CA264_21035 0.36 -0.4 68,440 + CA264_21035 0.37 +0.2 68,443 + CA264_21035 0.38 +1.2 68,449 + CA264_21035 0.38 -2.2 68,461 - CA264_21035 0.38 -1.8 68,554 + CA264_21035 0.43 -0.7 68,686 + CA264_21035 0.50 +0.4 68,735 + CA264_21035 0.52 -0.0 68,736 - CA264_21035 0.52 -0.9 68,749 - CA264_21035 0.53 +0.2 68,758 + CA264_21035 0.54 +0.2 68,758 + CA264_21035 0.54 -1.2 68,759 - CA264_21035 0.54 -0.1 68,830 + CA264_21035 0.57 +0.5 68,830 + CA264_21035 0.57 +0.4 68,830 + CA264_21035 0.57 +0.4 68,830 + CA264_21035 0.57 -0.6 68,831 - CA264_21035 0.57 +0.6 68,832 + CA264_21035 0.57 +0.3 68,832 + CA264_21035 0.57 +0.2 68,833 - CA264_21035 0.57 +0.6 68,883 + CA264_21035 0.60 +0.8 69,109 - CA264_21035 0.71 -0.1 69,115 + CA264_21035 0.72 -0.5 69,116 - CA264_21035 0.72 -0.1 69,116 - CA264_21035 0.72 +1.1 69,119 + CA264_21035 0.72 +0.4 69,119 + CA264_21035 0.72 +0.6 69,119 + CA264_21035 0.72 -0.5 69,120 - CA264_21035 0.72 +0.1 69,120 - CA264_21035 0.72 -0.6 69,164 + CA264_21035 0.74 +0.0 69,164 + CA264_21035 0.74 +0.0 69,164 + CA264_21035 0.74 +0.1 69,164 + CA264_21035 0.74 +0.3 69,165 - CA264_21035 0.74 -0.3 69,192 - CA264_21035 0.76 -0.5 69,257 + CA264_21035 0.79 -1.9 69,258 - CA264_21035 0.79 -0.4 69,279 + CA264_21035 0.80 -0.2 69,315 + CA264_21035 0.82 -0.6 69,361 - CA264_21035 0.84 +0.7 69,449 + CA264_21035 0.89 -0.3 69,449 + CA264_21035 0.89 +0.1 69,469 + CA264_21035 0.90 +0.3 69,469 + CA264_21035 0.90 +0.3 69,470 - CA264_21035 0.90 -0.8 69,481 + +0.2 69,481 + -0.3 69,530 + +0.3 69,550 + -0.6 69,631 - -0.1 69,662 + +0.5 69,669 - -0.4 69,676 + +1.3 69,682 + -2.7 69,778 + CA264_21040 0.31 +0.3 69,823 + CA264_21040 0.44 -0.7 69,823 + CA264_21040 0.44 -1.1 69,997 + -1.3 70,017 + +0.1 70,018 - -0.3 70,051 - -0.4 70,060 + -2.6 70,063 + -1.1 70,063 + -1.5 70,065 + -0.2 70,160 - +0.0 70,199 - -0.5 70,343 + -1.2 70,343 + -0.1 70,344 - +0.7 70,361 - -0.5 70,370 + -1.1 70,370 + -0.0 70,391 + -0.2 70,399 + +0.2 70,400 - +0.4 70,402 - -0.2 70,420 - +0.3 70,458 - -0.4 70,500 + -0.1 70,500 + +0.9 70,500 + -0.4 70,515 + +0.7 70,533 - -0.1 70,571 - -0.2 70,574 - -0.2 70,579 + -1.2 70,581 + -0.5 70,582 - +0.1 70,582 - -0.1 70,582 - -0.0 70,585 + -1.4 70,585 + -0.1 70,586 - +0.3 70,586 - +0.8 70,586 - -0.9 70,587 + -0.1 70,587 + -0.6 70,587 + -0.9 70,588 - +0.3 70,588 - -0.1 70,631 - +0.6 70,631 - +0.0 70,634 + -0.6 70,635 - -0.8 70,635 - -1.0 70,638 - +0.3 70,638 - +0.3 70,641 + -0.8 70,641 + -0.7 70,642 - -0.7 70,671 + +1.0 70,671 + -1.4 70,672 - +0.1
Or see this region's nucleotide sequence