Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_20310 and CA264_20315 are separated by 236 nucleotides CA264_20315 and CA264_20320 are separated by 166 nucleotides CA264_20320 and CA264_20325 are separated by 72 nucleotides
CA264_20310: CA264_20310 - TVP38/TMEM64 family protein, at 4,680,347 to 4,681,069
_20310
CA264_20315: CA264_20315 - cystathionine gamma-synthase, at 4,681,306 to 4,682,445
_20315
CA264_20320: CA264_20320 - hypothetical protein, at 4,682,612 to 4,683,136
_20320
CA264_20325: CA264_20325 - cell envelope biogenesis protein OmpA, at 4,683,209 to 4,683,919
_20325
Position (kb)
4681
4682
4683 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4680.677 kb on + strand, within CA264_20310 at 4680.678 kb on - strand, within CA264_20310 at 4680.763 kb on - strand, within CA264_20310 at 4680.786 kb on + strand, within CA264_20310 at 4680.854 kb on - strand, within CA264_20310 at 4680.890 kb on - strand, within CA264_20310 at 4680.946 kb on - strand, within CA264_20310 at 4680.957 kb on - strand, within CA264_20310 at 4680.959 kb on + strand, within CA264_20310 at 4680.959 kb on + strand, within CA264_20310 at 4680.960 kb on - strand, within CA264_20310 at 4680.960 kb on - strand, within CA264_20310 at 4681.140 kb on - strand at 4681.151 kb on + strand at 4681.205 kb on + strand at 4681.243 kb on + strand at 4681.244 kb on - strand at 4681.244 kb on - strand at 4681.245 kb on + strand at 4681.245 kb on + strand at 4681.246 kb on - strand at 4681.288 kb on - strand at 4681.288 kb on - strand at 4681.288 kb on - strand at 4681.292 kb on - strand at 4681.294 kb on - strand at 4681.327 kb on - strand at 4681.377 kb on + strand at 4681.377 kb on + strand at 4681.381 kb on + strand at 4681.382 kb on - strand at 4681.396 kb on + strand at 4681.397 kb on - strand at 4681.397 kb on - strand at 4681.429 kb on + strand, within CA264_20315 at 4681.598 kb on - strand, within CA264_20315 at 4681.635 kb on + strand, within CA264_20315 at 4681.635 kb on + strand, within CA264_20315 at 4681.636 kb on - strand, within CA264_20315 at 4681.639 kb on + strand, within CA264_20315 at 4681.640 kb on - strand, within CA264_20315 at 4681.647 kb on + strand, within CA264_20315 at 4681.785 kb on + strand, within CA264_20315 at 4681.786 kb on - strand, within CA264_20315 at 4681.835 kb on - strand, within CA264_20315 at 4681.891 kb on + strand, within CA264_20315 at 4681.913 kb on + strand, within CA264_20315 at 4681.914 kb on - strand, within CA264_20315 at 4682.123 kb on - strand, within CA264_20315 at 4682.478 kb on + strand at 4682.478 kb on + strand at 4682.479 kb on - strand at 4682.504 kb on - strand at 4682.568 kb on + strand at 4682.569 kb on - strand at 4682.578 kb on + strand at 4682.592 kb on - strand at 4682.611 kb on - strand at 4682.633 kb on + strand at 4682.696 kb on - strand, within CA264_20320 at 4682.773 kb on + strand, within CA264_20320 at 4682.935 kb on + strand, within CA264_20320 at 4682.936 kb on - strand, within CA264_20320 at 4682.940 kb on - strand, within CA264_20320 at 4682.973 kb on + strand, within CA264_20320 at 4682.973 kb on + strand, within CA264_20320 at 4682.999 kb on + strand, within CA264_20320 at 4683.000 kb on - strand, within CA264_20320 at 4683.044 kb on - strand, within CA264_20320 at 4683.044 kb on - strand, within CA264_20320 at 4683.134 kb on + strand at 4683.203 kb on + strand at 4683.204 kb on - strand at 4683.207 kb on + strand at 4683.208 kb on - strand at 4683.208 kb on - strand at 4683.211 kb on - strand at 4683.284 kb on - strand, within CA264_20325 at 4683.301 kb on + strand, within CA264_20325 at 4683.347 kb on + strand, within CA264_20325 at 4683.443 kb on - strand, within CA264_20325
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 4,680,677 + CA264_20310 0.46 +0.4 4,680,678 - CA264_20310 0.46 -1.4 4,680,763 - CA264_20310 0.58 +0.6 4,680,786 + CA264_20310 0.61 +0.1 4,680,854 - CA264_20310 0.70 -0.0 4,680,890 - CA264_20310 0.75 +0.1 4,680,946 - CA264_20310 0.83 +0.8 4,680,957 - CA264_20310 0.84 -0.0 4,680,959 + CA264_20310 0.85 -0.0 4,680,959 + CA264_20310 0.85 -0.5 4,680,960 - CA264_20310 0.85 +0.6 4,680,960 - CA264_20310 0.85 +0.7 4,681,140 - -0.4 4,681,151 + +0.7 4,681,205 + -0.2 4,681,243 + -0.3 4,681,244 - +0.2 4,681,244 - +0.8 4,681,245 + -0.3 4,681,245 + -0.1 4,681,246 - -0.0 4,681,288 - -0.7 4,681,288 - -0.1 4,681,288 - -0.2 4,681,292 - +0.7 4,681,294 - -0.6 4,681,327 - -0.6 4,681,377 + -0.0 4,681,377 + +0.1 4,681,381 + -0.9 4,681,382 - -0.5 4,681,396 + +0.8 4,681,397 - +1.0 4,681,397 - +0.6 4,681,429 + CA264_20315 0.11 -0.8 4,681,598 - CA264_20315 0.26 -0.5 4,681,635 + CA264_20315 0.29 -0.8 4,681,635 + CA264_20315 0.29 -0.3 4,681,636 - CA264_20315 0.29 -0.4 4,681,639 + CA264_20315 0.29 +0.1 4,681,640 - CA264_20315 0.29 +0.8 4,681,647 + CA264_20315 0.30 -0.8 4,681,785 + CA264_20315 0.42 -0.3 4,681,786 - CA264_20315 0.42 -1.0 4,681,835 - CA264_20315 0.46 -0.5 4,681,891 + CA264_20315 0.51 +0.1 4,681,913 + CA264_20315 0.53 -0.0 4,681,914 - CA264_20315 0.53 -0.5 4,682,123 - CA264_20315 0.72 -1.1 4,682,478 + -1.2 4,682,478 + -0.0 4,682,479 - -0.0 4,682,504 - -1.5 4,682,568 + -0.2 4,682,569 - -0.1 4,682,578 + +0.2 4,682,592 - +0.2 4,682,611 - -0.6 4,682,633 + +0.1 4,682,696 - CA264_20320 0.16 +1.8 4,682,773 + CA264_20320 0.31 +0.9 4,682,935 + CA264_20320 0.62 +0.3 4,682,936 - CA264_20320 0.62 +0.2 4,682,940 - CA264_20320 0.62 -1.3 4,682,973 + CA264_20320 0.69 +0.3 4,682,973 + CA264_20320 0.69 -1.0 4,682,999 + CA264_20320 0.74 -0.2 4,683,000 - CA264_20320 0.74 -0.6 4,683,044 - CA264_20320 0.82 -0.7 4,683,044 - CA264_20320 0.82 -0.3 4,683,134 + +1.7 4,683,203 + -1.0 4,683,204 - -0.9 4,683,207 + +0.1 4,683,208 - -0.1 4,683,208 - -0.8 4,683,211 - +1.8 4,683,284 - CA264_20325 0.11 -0.4 4,683,301 + CA264_20325 0.13 +0.0 4,683,347 + CA264_20325 0.19 -1.8 4,683,443 - CA264_20325 0.33 +0.5
Or see this region's nucleotide sequence