Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_19050
Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Cisplatin 0.025 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,426,867 | + | CA264_19045 | 0.36 | -1.3 | |
4,427,042 | + | CA264_19045 | 0.51 | -0.7 | |
4,427,096 | + | CA264_19045 | 0.56 | -1.7 | |
4,427,155 | - | CA264_19045 | 0.61 | +1.1 | |
4,427,304 | - | CA264_19045 | 0.74 | +0.3 | |
4,427,339 | - | CA264_19045 | 0.77 | +0.0 | |
4,427,391 | + | CA264_19045 | 0.82 | -0.3 | |
4,427,700 | - | -0.1 | |||
4,427,703 | + | -0.1 | |||
4,427,703 | + | +0.7 | |||
4,427,749 | + | -1.1 | |||
4,427,767 | + | -0.0 | |||
4,427,833 | - | -0.4 | |||
4,427,844 | + | -2.9 | |||
4,427,844 | + | -0.9 | |||
4,427,845 | - | +0.0 | |||
4,427,845 | - | -0.7 | |||
4,428,590 | + | +0.3 | |||
4,428,616 | - | -0.3 | |||
4,428,626 | + | +1.0 | |||
4,428,627 | - | -0.4 | |||
4,428,635 | + | -0.4 | |||
4,428,636 | - | +0.2 | |||
4,428,732 | - | CA264_19055 | 0.10 | -0.1 | |
4,428,824 | - | CA264_19055 | 0.20 | +0.1 | |
4,428,854 | - | CA264_19055 | 0.23 | -0.5 | |
4,428,888 | - | CA264_19055 | 0.26 | +1.4 | |
4,428,911 | + | CA264_19055 | 0.29 | -0.6 | |
4,428,911 | + | CA264_19055 | 0.29 | -2.4 | |
4,428,911 | + | CA264_19055 | 0.29 | -0.7 | |
4,428,939 | + | CA264_19055 | 0.32 | +1.0 | |
4,429,180 | + | CA264_19055 | 0.56 | -0.6 | |
4,429,229 | + | CA264_19055 | 0.61 | +1.0 | |
4,429,322 | - | CA264_19055 | 0.71 | +0.5 |
Or see this region's nucleotide sequence