Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17465 and CA264_17470 are separated by 104 nucleotides CA264_17470 and CA264_17475 are separated by 33 nucleotides CA264_17475 and CA264_17480 are separated by 134 nucleotides
CA264_17465: CA264_17465 - hypothetical protein, at 4,071,248 to 4,071,571
_17465
CA264_17470: CA264_17470 - hypothetical protein, at 4,071,676 to 4,072,308
_17470
CA264_17475: CA264_17475 - DNA replication and repair protein RecF, at 4,072,342 to 4,073,454
_17475
CA264_17480: CA264_17480 - pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha, at 4,073,589 to 4,074,635
_17480
Position (kb)
4072
4073
4074 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 4071.585 kb on - strand at 4071.585 kb on - strand at 4071.617 kb on + strand at 4071.619 kb on + strand at 4071.641 kb on - strand at 4071.645 kb on + strand at 4071.645 kb on + strand at 4071.645 kb on + strand at 4071.645 kb on + strand at 4071.646 kb on - strand at 4071.650 kb on + strand at 4071.650 kb on + strand at 4071.650 kb on + strand at 4071.650 kb on + strand at 4071.650 kb on + strand at 4071.651 kb on - strand at 4071.651 kb on - strand at 4071.651 kb on - strand at 4071.651 kb on - strand at 4071.714 kb on + strand at 4071.714 kb on + strand at 4071.715 kb on - strand at 4071.727 kb on + strand at 4071.727 kb on + strand at 4071.727 kb on + strand at 4071.735 kb on + strand at 4071.751 kb on + strand, within CA264_17470 at 4071.751 kb on + strand, within CA264_17470 at 4071.752 kb on - strand, within CA264_17470 at 4071.818 kb on - strand, within CA264_17470 at 4071.820 kb on - strand, within CA264_17470 at 4071.820 kb on - strand, within CA264_17470 at 4071.820 kb on - strand, within CA264_17470 at 4071.862 kb on - strand, within CA264_17470 at 4071.874 kb on + strand, within CA264_17470 at 4071.874 kb on + strand, within CA264_17470 at 4071.875 kb on - strand, within CA264_17470 at 4071.875 kb on - strand, within CA264_17470 at 4071.880 kb on + strand, within CA264_17470 at 4071.902 kb on + strand, within CA264_17470 at 4071.931 kb on - strand, within CA264_17470 at 4071.944 kb on - strand, within CA264_17470 at 4071.944 kb on - strand, within CA264_17470 at 4071.954 kb on + strand, within CA264_17470 at 4071.954 kb on + strand, within CA264_17470 at 4071.954 kb on + strand, within CA264_17470 at 4071.954 kb on + strand, within CA264_17470 at 4071.954 kb on + strand, within CA264_17470 at 4071.954 kb on + strand, within CA264_17470 at 4071.954 kb on + strand, within CA264_17470 at 4071.955 kb on - strand, within CA264_17470 at 4071.955 kb on - strand, within CA264_17470 at 4071.955 kb on - strand, within CA264_17470 at 4071.955 kb on - strand, within CA264_17470 at 4071.955 kb on - strand, within CA264_17470 at 4071.993 kb on + strand, within CA264_17470 at 4071.993 kb on + strand, within CA264_17470 at 4071.994 kb on - strand, within CA264_17470 at 4072.009 kb on + strand, within CA264_17470 at 4072.039 kb on - strand, within CA264_17470 at 4072.042 kb on + strand, within CA264_17470 at 4072.043 kb on - strand, within CA264_17470 at 4072.043 kb on - strand, within CA264_17470 at 4072.043 kb on - strand, within CA264_17470 at 4072.065 kb on + strand, within CA264_17470 at 4072.066 kb on - strand, within CA264_17470 at 4072.090 kb on + strand, within CA264_17470 at 4072.090 kb on + strand, within CA264_17470 at 4072.091 kb on - strand, within CA264_17470 at 4072.147 kb on + strand, within CA264_17470 at 4072.147 kb on + strand, within CA264_17470 at 4072.147 kb on + strand, within CA264_17470 at 4072.147 kb on + strand, within CA264_17470 at 4072.148 kb on - strand, within CA264_17470 at 4072.148 kb on - strand, within CA264_17470 at 4072.149 kb on + strand, within CA264_17470 at 4072.150 kb on - strand, within CA264_17470 at 4072.156 kb on + strand, within CA264_17470 at 4072.186 kb on + strand, within CA264_17470 at 4072.199 kb on + strand, within CA264_17470 at 4072.203 kb on + strand, within CA264_17470 at 4072.204 kb on - strand, within CA264_17470 at 4072.204 kb on - strand, within CA264_17470 at 4072.262 kb on - strand at 4072.270 kb on + strand at 4072.270 kb on + strand at 4072.344 kb on - strand at 4072.396 kb on - strand at 4072.577 kb on - strand, within CA264_17475 at 4072.610 kb on + strand, within CA264_17475 at 4072.778 kb on + strand, within CA264_17475 at 4072.789 kb on + strand, within CA264_17475 at 4072.820 kb on + strand, within CA264_17475 at 4072.988 kb on + strand, within CA264_17475 at 4072.988 kb on + strand, within CA264_17475 at 4072.988 kb on + strand, within CA264_17475 at 4072.989 kb on - strand, within CA264_17475 at 4073.201 kb on - strand, within CA264_17475 at 4073.321 kb on + strand, within CA264_17475 at 4073.383 kb on - strand at 4073.414 kb on + strand at 4073.439 kb on + strand at 4073.464 kb on - strand at 4073.496 kb on + strand at 4073.514 kb on + strand at 4073.516 kb on + strand at 4073.552 kb on - strand at 4073.554 kb on - strand at 4073.582 kb on - strand at 4074.061 kb on + strand, within CA264_17480
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 4,071,585 - +0.3 4,071,585 - -0.1 4,071,617 + +0.1 4,071,619 + -0.5 4,071,641 - +1.5 4,071,645 + -1.0 4,071,645 + -0.4 4,071,645 + -1.4 4,071,645 + -0.6 4,071,646 - +0.0 4,071,650 + -0.8 4,071,650 + -0.6 4,071,650 + -1.9 4,071,650 + -0.7 4,071,650 + +0.0 4,071,651 - +0.2 4,071,651 - +0.4 4,071,651 - -0.9 4,071,651 - +0.2 4,071,714 + -0.3 4,071,714 + -0.8 4,071,715 - -0.1 4,071,727 + +0.2 4,071,727 + -1.1 4,071,727 + +2.2 4,071,735 + -0.9 4,071,751 + CA264_17470 0.12 -0.2 4,071,751 + CA264_17470 0.12 -0.7 4,071,752 - CA264_17470 0.12 +0.8 4,071,818 - CA264_17470 0.22 -2.8 4,071,820 - CA264_17470 0.23 +0.6 4,071,820 - CA264_17470 0.23 -0.9 4,071,820 - CA264_17470 0.23 -0.8 4,071,862 - CA264_17470 0.29 -1.8 4,071,874 + CA264_17470 0.31 -0.8 4,071,874 + CA264_17470 0.31 -0.3 4,071,875 - CA264_17470 0.31 +0.6 4,071,875 - CA264_17470 0.31 -0.1 4,071,880 + CA264_17470 0.32 +1.7 4,071,902 + CA264_17470 0.36 -0.1 4,071,931 - CA264_17470 0.40 +0.0 4,071,944 - CA264_17470 0.42 +0.6 4,071,944 - CA264_17470 0.42 +1.3 4,071,954 + CA264_17470 0.44 -1.9 4,071,954 + CA264_17470 0.44 -0.6 4,071,954 + CA264_17470 0.44 -0.7 4,071,954 + CA264_17470 0.44 -0.2 4,071,954 + CA264_17470 0.44 -1.1 4,071,954 + CA264_17470 0.44 -0.8 4,071,954 + CA264_17470 0.44 -0.2 4,071,955 - CA264_17470 0.44 +1.3 4,071,955 - CA264_17470 0.44 -0.6 4,071,955 - CA264_17470 0.44 -0.8 4,071,955 - CA264_17470 0.44 +1.7 4,071,955 - CA264_17470 0.44 -1.2 4,071,993 + CA264_17470 0.50 -0.7 4,071,993 + CA264_17470 0.50 -1.3 4,071,994 - CA264_17470 0.50 -0.6 4,072,009 + CA264_17470 0.53 -1.8 4,072,039 - CA264_17470 0.57 -0.9 4,072,042 + CA264_17470 0.58 -0.2 4,072,043 - CA264_17470 0.58 -1.5 4,072,043 - CA264_17470 0.58 -0.3 4,072,043 - CA264_17470 0.58 +0.0 4,072,065 + CA264_17470 0.61 -0.8 4,072,066 - CA264_17470 0.62 +0.3 4,072,090 + CA264_17470 0.65 -0.8 4,072,090 + CA264_17470 0.65 -1.4 4,072,091 - CA264_17470 0.66 -0.2 4,072,147 + CA264_17470 0.74 -0.5 4,072,147 + CA264_17470 0.74 -0.5 4,072,147 + CA264_17470 0.74 +0.8 4,072,147 + CA264_17470 0.74 -0.8 4,072,148 - CA264_17470 0.75 -1.1 4,072,148 - CA264_17470 0.75 -0.5 4,072,149 + CA264_17470 0.75 -1.6 4,072,150 - CA264_17470 0.75 -1.1 4,072,156 + CA264_17470 0.76 -1.2 4,072,186 + CA264_17470 0.81 -0.5 4,072,199 + CA264_17470 0.83 +0.8 4,072,203 + CA264_17470 0.83 -0.4 4,072,204 - CA264_17470 0.83 +0.7 4,072,204 - CA264_17470 0.83 +0.0 4,072,262 - -0.1 4,072,270 + -0.9 4,072,270 + -1.4 4,072,344 - -0.4 4,072,396 - -2.9 4,072,577 - CA264_17475 0.21 -2.9 4,072,610 + CA264_17475 0.24 -0.5 4,072,778 + CA264_17475 0.39 -3.4 4,072,789 + CA264_17475 0.40 -3.9 4,072,820 + CA264_17475 0.43 -3.1 4,072,988 + CA264_17475 0.58 -1.3 4,072,988 + CA264_17475 0.58 -3.2 4,072,988 + CA264_17475 0.58 -4.1 4,072,989 - CA264_17475 0.58 -1.8 4,073,201 - CA264_17475 0.77 -1.5 4,073,321 + CA264_17475 0.88 -3.4 4,073,383 - -1.5 4,073,414 + -2.0 4,073,439 + -2.3 4,073,464 - -1.7 4,073,496 + -1.1 4,073,514 + -1.0 4,073,516 + -1.6 4,073,552 - -2.9 4,073,554 - -2.7 4,073,582 - -0.6 4,074,061 + CA264_17480 0.45 +0.5
Or see this region's nucleotide sequence