Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_14810 and CA264_14815 are separated by 457 nucleotides CA264_14815 and CA264_14820 are separated by 158 nucleotides CA264_14820 and CA264_14825 are separated by 69 nucleotides
CA264_14810: CA264_14810 - hypothetical protein, at 3,478,184 to 3,478,888
_14810
CA264_14815: CA264_14815 - transcriptional regulator, at 3,479,346 to 3,479,579
_14815
CA264_14820: CA264_14820 - hypothetical protein, at 3,479,738 to 3,480,067
_14820
CA264_14825: CA264_14825 - hypothetical protein, at 3,480,137 to 3,480,547
_14825
Position (kb)
3479
3480 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 3478.354 kb on + strand, within CA264_14810 at 3478.362 kb on + strand, within CA264_14810 at 3478.363 kb on - strand, within CA264_14810 at 3478.397 kb on - strand, within CA264_14810 at 3478.397 kb on - strand, within CA264_14810 at 3478.397 kb on - strand, within CA264_14810 at 3478.400 kb on - strand, within CA264_14810 at 3478.479 kb on + strand, within CA264_14810 at 3478.484 kb on + strand, within CA264_14810 at 3478.491 kb on + strand, within CA264_14810 at 3478.492 kb on - strand at 3478.497 kb on + strand, within CA264_14810 at 3478.497 kb on + strand, within CA264_14810 at 3478.497 kb on + strand, within CA264_14810 at 3478.497 kb on + strand, within CA264_14810 at 3478.498 kb on - strand, within CA264_14810 at 3478.501 kb on + strand, within CA264_14810 at 3478.508 kb on + strand, within CA264_14810 at 3478.509 kb on - strand, within CA264_14810 at 3478.509 kb on - strand, within CA264_14810 at 3478.596 kb on + strand, within CA264_14810 at 3478.627 kb on - strand, within CA264_14810 at 3478.629 kb on + strand, within CA264_14810 at 3478.669 kb on + strand, within CA264_14810 at 3478.669 kb on - strand, within CA264_14810 at 3478.670 kb on - strand, within CA264_14810 at 3478.685 kb on + strand, within CA264_14810 at 3478.688 kb on - strand, within CA264_14810 at 3478.701 kb on + strand, within CA264_14810 at 3478.702 kb on - strand, within CA264_14810 at 3478.716 kb on + strand, within CA264_14810 at 3478.717 kb on - strand, within CA264_14810 at 3478.721 kb on - strand, within CA264_14810 at 3478.764 kb on + strand, within CA264_14810 at 3478.772 kb on + strand, within CA264_14810 at 3478.784 kb on + strand, within CA264_14810 at 3478.786 kb on + strand, within CA264_14810 at 3478.786 kb on + strand, within CA264_14810 at 3478.787 kb on - strand, within CA264_14810 at 3478.787 kb on - strand, within CA264_14810 at 3478.846 kb on + strand at 3478.868 kb on + strand at 3478.869 kb on - strand at 3478.871 kb on - strand at 3478.871 kb on - strand at 3478.898 kb on - strand at 3478.898 kb on - strand at 3478.901 kb on + strand at 3478.902 kb on - strand at 3478.903 kb on + strand at 3478.904 kb on - strand at 3478.904 kb on - strand at 3478.904 kb on - strand at 3478.904 kb on - strand at 3478.904 kb on - strand at 3478.904 kb on - strand at 3478.912 kb on - strand at 3478.925 kb on - strand at 3478.969 kb on + strand at 3478.969 kb on + strand at 3478.970 kb on - strand at 3478.974 kb on - strand at 3479.003 kb on + strand at 3479.012 kb on - strand at 3479.039 kb on + strand at 3479.063 kb on - strand at 3479.068 kb on + strand at 3479.088 kb on - strand at 3479.088 kb on - strand at 3479.088 kb on - strand at 3479.089 kb on + strand at 3479.089 kb on + strand at 3479.089 kb on + strand at 3479.090 kb on - strand at 3479.090 kb on - strand at 3479.101 kb on + strand at 3479.102 kb on - strand at 3479.129 kb on - strand at 3479.130 kb on + strand at 3479.131 kb on - strand at 3479.134 kb on - strand at 3479.148 kb on - strand at 3479.159 kb on + strand at 3479.174 kb on + strand at 3479.174 kb on + strand at 3479.179 kb on + strand at 3479.194 kb on + strand at 3479.194 kb on + strand at 3479.217 kb on - strand at 3479.220 kb on + strand at 3479.284 kb on + strand at 3479.284 kb on + strand at 3479.284 kb on + strand at 3479.284 kb on + strand at 3479.285 kb on - strand at 3479.285 kb on - strand at 3479.298 kb on + strand at 3479.298 kb on + strand at 3479.302 kb on + strand at 3479.302 kb on + strand at 3479.318 kb on + strand at 3479.318 kb on + strand at 3479.330 kb on - strand at 3479.340 kb on + strand at 3479.341 kb on - strand at 3479.342 kb on + strand at 3479.342 kb on + strand at 3479.342 kb on + strand at 3479.377 kb on - strand, within CA264_14815 at 3479.495 kb on - strand, within CA264_14815 at 3479.562 kb on + strand at 3479.610 kb on + strand at 3479.631 kb on - strand at 3479.664 kb on - strand at 3479.737 kb on + strand at 3479.737 kb on + strand at 3479.738 kb on - strand at 3479.765 kb on - strand at 3479.822 kb on + strand, within CA264_14820 at 3479.822 kb on + strand, within CA264_14820 at 3479.823 kb on - strand, within CA264_14820 at 3479.823 kb on - strand, within CA264_14820 at 3479.823 kb on - strand, within CA264_14820 at 3479.833 kb on - strand, within CA264_14820 at 3479.858 kb on + strand, within CA264_14820 at 3479.858 kb on + strand, within CA264_14820 at 3479.858 kb on + strand, within CA264_14820 at 3479.858 kb on + strand, within CA264_14820 at 3479.859 kb on - strand, within CA264_14820 at 3479.859 kb on - strand, within CA264_14820 at 3479.891 kb on + strand, within CA264_14820 at 3479.891 kb on + strand, within CA264_14820 at 3479.891 kb on + strand, within CA264_14820 at 3479.893 kb on + strand, within CA264_14820 at 3479.894 kb on - strand, within CA264_14820 at 3479.896 kb on + strand, within CA264_14820 at 3479.896 kb on + strand, within CA264_14820 at 3479.896 kb on + strand, within CA264_14820 at 3479.897 kb on - strand, within CA264_14820 at 3479.897 kb on - strand, within CA264_14820 at 3479.897 kb on - strand, within CA264_14820 at 3479.897 kb on - strand, within CA264_14820 at 3479.897 kb on - strand, within CA264_14820 at 3479.897 kb on - strand, within CA264_14820 at 3479.924 kb on - strand, within CA264_14820 at 3479.933 kb on + strand, within CA264_14820 at 3480.050 kb on + strand at 3480.050 kb on + strand at 3480.050 kb on + strand at 3480.051 kb on - strand at 3480.051 kb on - strand at 3480.051 kb on - strand at 3480.054 kb on + strand at 3480.054 kb on + strand at 3480.054 kb on + strand at 3480.054 kb on + strand at 3480.054 kb on + strand at 3480.055 kb on - strand at 3480.065 kb on + strand at 3480.074 kb on + strand at 3480.074 kb on + strand at 3480.074 kb on + strand at 3480.075 kb on - strand at 3480.075 kb on - strand at 3480.075 kb on - strand at 3480.075 kb on - strand at 3480.075 kb on - strand at 3480.075 kb on - strand at 3480.079 kb on - strand at 3480.151 kb on - strand at 3480.153 kb on + strand at 3480.156 kb on + strand at 3480.156 kb on + strand at 3480.157 kb on - strand at 3480.157 kb on - strand at 3480.232 kb on - strand, within CA264_14825 at 3480.255 kb on + strand, within CA264_14825 at 3480.255 kb on + strand, within CA264_14825 at 3480.256 kb on - strand, within CA264_14825 at 3480.256 kb on - strand, within CA264_14825 at 3480.261 kb on - strand, within CA264_14825 at 3480.283 kb on + strand, within CA264_14825 at 3480.285 kb on + strand, within CA264_14825 at 3480.286 kb on - strand, within CA264_14825 at 3480.286 kb on - strand, within CA264_14825 at 3480.286 kb on - strand, within CA264_14825 at 3480.286 kb on - strand, within CA264_14825 at 3480.290 kb on + strand, within CA264_14825 at 3480.291 kb on - strand, within CA264_14825 at 3480.297 kb on + strand, within CA264_14825 at 3480.308 kb on + strand, within CA264_14825 at 3480.308 kb on + strand, within CA264_14825 at 3480.309 kb on - strand, within CA264_14825 at 3480.314 kb on + strand, within CA264_14825 at 3480.314 kb on + strand, within CA264_14825 at 3480.315 kb on - strand, within CA264_14825 at 3480.315 kb on - strand, within CA264_14825 at 3480.315 kb on - strand, within CA264_14825 at 3480.450 kb on + strand, within CA264_14825 at 3480.450 kb on + strand, within CA264_14825 at 3480.450 kb on + strand, within CA264_14825 at 3480.450 kb on + strand, within CA264_14825 at 3480.451 kb on - strand, within CA264_14825 at 3480.451 kb on - strand, within CA264_14825 at 3480.523 kb on + strand at 3480.524 kb on - strand at 3480.524 kb on - strand at 3480.525 kb on + strand at 3480.530 kb on - strand at 3480.554 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 3,478,354 + CA264_14810 0.24 -1.1 3,478,362 + CA264_14810 0.25 +1.2 3,478,363 - CA264_14810 0.25 -0.7 3,478,397 - CA264_14810 0.30 +0.9 3,478,397 - CA264_14810 0.30 +2.2 3,478,397 - CA264_14810 0.30 +1.1 3,478,400 - CA264_14810 0.31 -0.4 3,478,479 + CA264_14810 0.42 -1.0 3,478,484 + CA264_14810 0.43 -0.2 3,478,491 + CA264_14810 0.44 -1.7 3,478,492 - +0.1 3,478,497 + CA264_14810 0.44 -1.4 3,478,497 + CA264_14810 0.44 -1.3 3,478,497 + CA264_14810 0.44 +0.0 3,478,497 + CA264_14810 0.44 -0.5 3,478,498 - CA264_14810 0.45 -0.2 3,478,501 + CA264_14810 0.45 -0.2 3,478,508 + CA264_14810 0.46 +1.3 3,478,509 - CA264_14810 0.46 -0.6 3,478,509 - CA264_14810 0.46 -1.0 3,478,596 + CA264_14810 0.58 +0.1 3,478,627 - CA264_14810 0.63 -1.0 3,478,629 + CA264_14810 0.63 -2.0 3,478,669 + CA264_14810 0.69 -0.4 3,478,669 - CA264_14810 0.69 -0.2 3,478,670 - CA264_14810 0.69 -0.4 3,478,685 + CA264_14810 0.71 +0.9 3,478,688 - CA264_14810 0.71 +0.4 3,478,701 + CA264_14810 0.73 -0.5 3,478,702 - CA264_14810 0.73 +0.1 3,478,716 + CA264_14810 0.75 -0.5 3,478,717 - CA264_14810 0.76 +0.1 3,478,721 - CA264_14810 0.76 +0.9 3,478,764 + CA264_14810 0.82 -1.1 3,478,772 + CA264_14810 0.83 -0.9 3,478,784 + CA264_14810 0.85 -1.3 3,478,786 + CA264_14810 0.85 -0.2 3,478,786 + CA264_14810 0.85 -0.1 3,478,787 - CA264_14810 0.86 -0.7 3,478,787 - CA264_14810 0.86 -0.2 3,478,846 + -0.9 3,478,868 + -0.6 3,478,869 - -0.7 3,478,871 - +1.1 3,478,871 - +1.2 3,478,898 - -0.0 3,478,898 - -0.9 3,478,901 + -1.7 3,478,902 - -0.2 3,478,903 + +0.1 3,478,904 - -3.3 3,478,904 - -0.3 3,478,904 - +0.2 3,478,904 - -0.4 3,478,904 - -0.5 3,478,904 - +1.9 3,478,912 - -0.8 3,478,925 - +0.2 3,478,969 + -0.7 3,478,969 + -1.1 3,478,970 - -1.0 3,478,974 - -2.2 3,479,003 + -0.9 3,479,012 - -0.2 3,479,039 + -1.6 3,479,063 - -0.6 3,479,068 + -1.4 3,479,088 - +0.6 3,479,088 - -0.5 3,479,088 - -1.4 3,479,089 + -2.4 3,479,089 + -1.7 3,479,089 + -2.1 3,479,090 - -0.7 3,479,090 - -0.0 3,479,101 + -2.2 3,479,102 - +0.0 3,479,129 - -0.7 3,479,130 + -3.0 3,479,131 - -0.9 3,479,134 - -0.3 3,479,148 - -1.4 3,479,159 + -1.7 3,479,174 + -1.2 3,479,174 + -2.1 3,479,179 + -2.4 3,479,194 + -0.5 3,479,194 + -1.4 3,479,217 - -1.0 3,479,220 + -2.5 3,479,284 + -1.4 3,479,284 + -0.2 3,479,284 + -1.3 3,479,284 + -4.1 3,479,285 - +0.4 3,479,285 - -0.9 3,479,298 + +0.3 3,479,298 + -2.4 3,479,302 + -1.6 3,479,302 + -1.3 3,479,318 + -1.9 3,479,318 + -3.1 3,479,330 - +0.2 3,479,340 + -0.3 3,479,341 - -1.2 3,479,342 + -0.4 3,479,342 + -2.7 3,479,342 + -1.1 3,479,377 - CA264_14815 0.13 -1.0 3,479,495 - CA264_14815 0.64 -0.9 3,479,562 + -4.0 3,479,610 + -3.7 3,479,631 - -0.8 3,479,664 - -0.2 3,479,737 + -2.1 3,479,737 + -4.8 3,479,738 - -1.6 3,479,765 - +0.5 3,479,822 + CA264_14820 0.25 -1.9 3,479,822 + CA264_14820 0.25 -4.4 3,479,823 - CA264_14820 0.26 -1.2 3,479,823 - CA264_14820 0.26 -2.2 3,479,823 - CA264_14820 0.26 +0.0 3,479,833 - CA264_14820 0.29 -0.9 3,479,858 + CA264_14820 0.36 +0.6 3,479,858 + CA264_14820 0.36 -3.0 3,479,858 + CA264_14820 0.36 -3.7 3,479,858 + CA264_14820 0.36 -2.6 3,479,859 - CA264_14820 0.37 -0.2 3,479,859 - CA264_14820 0.37 -1.3 3,479,891 + CA264_14820 0.46 -2.7 3,479,891 + CA264_14820 0.46 +0.1 3,479,891 + CA264_14820 0.46 -2.7 3,479,893 + CA264_14820 0.47 -0.8 3,479,894 - CA264_14820 0.47 -1.1 3,479,896 + CA264_14820 0.48 -4.3 3,479,896 + CA264_14820 0.48 -2.9 3,479,896 + CA264_14820 0.48 -0.8 3,479,897 - CA264_14820 0.48 -1.1 3,479,897 - CA264_14820 0.48 -0.3 3,479,897 - CA264_14820 0.48 +1.9 3,479,897 - CA264_14820 0.48 -0.7 3,479,897 - CA264_14820 0.48 -0.2 3,479,897 - CA264_14820 0.48 +1.9 3,479,924 - CA264_14820 0.56 -2.1 3,479,933 + CA264_14820 0.59 -2.3 3,480,050 + -0.4 3,480,050 + -2.2 3,480,050 + -3.2 3,480,051 - +0.6 3,480,051 - -1.3 3,480,051 - -0.8 3,480,054 + -1.9 3,480,054 + -1.7 3,480,054 + -0.8 3,480,054 + -1.7 3,480,054 + -1.3 3,480,055 - -0.3 3,480,065 + -3.5 3,480,074 + +1.1 3,480,074 + -2.9 3,480,074 + -3.5 3,480,075 - -2.0 3,480,075 - -3.4 3,480,075 - -0.7 3,480,075 - +0.1 3,480,075 - -2.2 3,480,075 - -0.1 3,480,079 - -2.1 3,480,151 - -0.7 3,480,153 + -0.9 3,480,156 + -2.5 3,480,156 + -3.5 3,480,157 - -1.5 3,480,157 - +0.0 3,480,232 - CA264_14825 0.23 -1.1 3,480,255 + CA264_14825 0.29 +2.6 3,480,255 + CA264_14825 0.29 -2.7 3,480,256 - CA264_14825 0.29 -1.9 3,480,256 - CA264_14825 0.29 -0.4 3,480,261 - CA264_14825 0.30 -0.3 3,480,283 + CA264_14825 0.36 -2.8 3,480,285 + CA264_14825 0.36 -4.0 3,480,286 - CA264_14825 0.36 -0.5 3,480,286 - CA264_14825 0.36 -0.3 3,480,286 - CA264_14825 0.36 -1.4 3,480,286 - CA264_14825 0.36 -1.2 3,480,290 + CA264_14825 0.37 -1.1 3,480,291 - CA264_14825 0.37 -0.4 3,480,297 + CA264_14825 0.39 -2.3 3,480,308 + CA264_14825 0.42 -3.2 3,480,308 + CA264_14825 0.42 -0.2 3,480,309 - CA264_14825 0.42 +1.5 3,480,314 + CA264_14825 0.43 -0.4 3,480,314 + CA264_14825 0.43 -1.5 3,480,315 - CA264_14825 0.43 -0.4 3,480,315 - CA264_14825 0.43 +1.4 3,480,315 - CA264_14825 0.43 +0.1 3,480,450 + CA264_14825 0.76 -2.3 3,480,450 + CA264_14825 0.76 -3.1 3,480,450 + CA264_14825 0.76 -2.8 3,480,450 + CA264_14825 0.76 -3.7 3,480,451 - CA264_14825 0.76 -0.8 3,480,451 - CA264_14825 0.76 -1.4 3,480,523 + -1.1 3,480,524 - -0.5 3,480,524 - -0.7 3,480,525 + -3.6 3,480,530 - +1.8 3,480,554 - -2.4
Or see this region's nucleotide sequence