Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_11760

Experiment: m.b. Cisplatin 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_11755 and CA264_11760 are separated by 1 nucleotidesCA264_11760 and CA264_11765 are separated by 0 nucleotides CA264_11755: CA264_11755 - ATP-binding protein, at 2,739,507 to 2,740,979 _11755 CA264_11760: CA264_11760 - hypothetical protein, at 2,740,981 to 2,741,688 _11760 CA264_11765: CA264_11765 - DNA (cytosine-5-)-methyltransferase, at 2,741,689 to 2,742,744 _11765 Position (kb) 2740 2741 2742Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 2740.007 kb on + strand, within CA264_11755at 2740.099 kb on - strand, within CA264_11755at 2740.112 kb on + strand, within CA264_11755at 2740.123 kb on + strand, within CA264_11755at 2740.123 kb on + strand, within CA264_11755at 2740.124 kb on - strand, within CA264_11755at 2740.210 kb on + strand, within CA264_11755at 2740.210 kb on + strand, within CA264_11755at 2740.227 kb on + strand, within CA264_11755at 2740.227 kb on + strand, within CA264_11755at 2740.242 kb on - strand, within CA264_11755at 2740.289 kb on + strand, within CA264_11755at 2740.289 kb on + strand, within CA264_11755at 2740.290 kb on - strand, within CA264_11755at 2740.290 kb on - strand, within CA264_11755at 2740.337 kb on + strand, within CA264_11755at 2740.368 kb on + strand, within CA264_11755at 2740.369 kb on - strand, within CA264_11755at 2740.369 kb on - strand, within CA264_11755at 2740.371 kb on - strand, within CA264_11755at 2740.403 kb on + strand, within CA264_11755at 2740.473 kb on + strand, within CA264_11755at 2740.518 kb on + strand, within CA264_11755at 2740.577 kb on + strand, within CA264_11755at 2740.605 kb on + strand, within CA264_11755at 2740.606 kb on - strand, within CA264_11755at 2740.606 kb on - strand, within CA264_11755at 2740.711 kb on - strand, within CA264_11755at 2740.766 kb on + strand, within CA264_11755at 2740.766 kb on + strand, within CA264_11755at 2740.766 kb on + strand, within CA264_11755at 2740.860 kb on - strandat 2740.860 kb on - strandat 2740.889 kb on + strandat 2740.895 kb on - strandat 2740.999 kb on + strandat 2741.017 kb on + strandat 2741.132 kb on + strand, within CA264_11760at 2741.194 kb on + strand, within CA264_11760at 2741.194 kb on + strand, within CA264_11760at 2741.195 kb on - strand, within CA264_11760at 2741.217 kb on + strand, within CA264_11760at 2741.248 kb on + strand, within CA264_11760at 2741.248 kb on + strand, within CA264_11760at 2741.511 kb on + strand, within CA264_11760at 2741.550 kb on + strand, within CA264_11760at 2741.550 kb on + strand, within CA264_11760at 2741.695 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml
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2,740,007 + CA264_11755 0.34 +0.4
2,740,099 - CA264_11755 0.40 -0.2
2,740,112 + CA264_11755 0.41 -0.5
2,740,123 + CA264_11755 0.42 -1.3
2,740,123 + CA264_11755 0.42 -0.3
2,740,124 - CA264_11755 0.42 -1.6
2,740,210 + CA264_11755 0.48 +0.1
2,740,210 + CA264_11755 0.48 -0.3
2,740,227 + CA264_11755 0.49 +0.8
2,740,227 + CA264_11755 0.49 +0.5
2,740,242 - CA264_11755 0.50 -0.6
2,740,289 + CA264_11755 0.53 -1.0
2,740,289 + CA264_11755 0.53 +0.2
2,740,290 - CA264_11755 0.53 -1.8
2,740,290 - CA264_11755 0.53 +0.3
2,740,337 + CA264_11755 0.56 +0.8
2,740,368 + CA264_11755 0.58 +0.6
2,740,369 - CA264_11755 0.59 +0.4
2,740,369 - CA264_11755 0.59 -1.2
2,740,371 - CA264_11755 0.59 +0.3
2,740,403 + CA264_11755 0.61 +0.2
2,740,473 + CA264_11755 0.66 -1.0
2,740,518 + CA264_11755 0.69 -0.5
2,740,577 + CA264_11755 0.73 -0.3
2,740,605 + CA264_11755 0.75 +0.5
2,740,606 - CA264_11755 0.75 +0.6
2,740,606 - CA264_11755 0.75 +0.1
2,740,711 - CA264_11755 0.82 -1.2
2,740,766 + CA264_11755 0.85 -0.2
2,740,766 + CA264_11755 0.85 -0.2
2,740,766 + CA264_11755 0.85 -0.1
2,740,860 - -2.8
2,740,860 - -1.9
2,740,889 + -0.1
2,740,895 - -0.0
2,740,999 + -2.3
2,741,017 + -1.7
2,741,132 + CA264_11760 0.21 -2.7
2,741,194 + CA264_11760 0.30 -0.2
2,741,194 + CA264_11760 0.30 -1.9
2,741,195 - CA264_11760 0.30 -1.0
2,741,217 + CA264_11760 0.33 -0.4
2,741,248 + CA264_11760 0.38 -1.3
2,741,248 + CA264_11760 0.38 -1.5
2,741,511 + CA264_11760 0.75 -4.1
2,741,550 + CA264_11760 0.80 -2.5
2,741,550 + CA264_11760 0.80 -0.0
2,741,695 - +1.0

Or see this region's nucleotide sequence