Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_10360

Experiment: m.b. Cisplatin 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_10355 and CA264_10360 are separated by 85 nucleotidesCA264_10360 and CA264_10365 overlap by 4 nucleotidesCA264_10365 and CA264_10370 are separated by 543 nucleotides CA264_10355: CA264_10355 - hypothetical protein, at 2,407,468 to 2,408,946 _10355 CA264_10360: CA264_10360 - hypothetical protein, at 2,409,032 to 2,410,042 _10360 CA264_10365: CA264_10365 - hypothetical protein, at 2,410,039 to 2,410,245 _10365 CA264_10370: CA264_10370 - hypothetical protein, at 2,410,789 to 2,412,804 _10370 Position (kb) 2409 2410 2411Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2408.033 kb on + strand, within CA264_10355at 2408.054 kb on + strand, within CA264_10355at 2408.055 kb on - strand, within CA264_10355at 2408.055 kb on - strand, within CA264_10355at 2408.082 kb on + strand, within CA264_10355at 2408.091 kb on + strand, within CA264_10355at 2408.150 kb on - strand, within CA264_10355at 2408.164 kb on - strand, within CA264_10355at 2408.222 kb on + strand, within CA264_10355at 2408.296 kb on - strand, within CA264_10355at 2408.309 kb on + strand, within CA264_10355at 2408.310 kb on - strand, within CA264_10355at 2408.310 kb on - strand, within CA264_10355at 2408.330 kb on + strand, within CA264_10355at 2408.330 kb on + strand, within CA264_10355at 2408.331 kb on - strand, within CA264_10355at 2408.411 kb on - strand, within CA264_10355at 2408.414 kb on - strand, within CA264_10355at 2408.474 kb on + strand, within CA264_10355at 2408.508 kb on + strand, within CA264_10355at 2408.509 kb on - strand, within CA264_10355at 2408.518 kb on + strand, within CA264_10355at 2408.602 kb on + strand, within CA264_10355at 2408.603 kb on - strand, within CA264_10355at 2408.606 kb on + strand, within CA264_10355at 2408.606 kb on + strand, within CA264_10355at 2408.606 kb on + strand, within CA264_10355at 2408.607 kb on - strand, within CA264_10355at 2408.607 kb on - strand, within CA264_10355at 2408.614 kb on + strand, within CA264_10355at 2408.624 kb on - strand, within CA264_10355at 2408.671 kb on + strand, within CA264_10355at 2408.677 kb on - strand, within CA264_10355at 2408.712 kb on + strand, within CA264_10355at 2408.713 kb on - strand, within CA264_10355at 2408.735 kb on + strand, within CA264_10355at 2408.736 kb on - strand, within CA264_10355at 2408.807 kb on - strandat 2408.941 kb on - strandat 2408.951 kb on - strandat 2409.225 kb on + strand, within CA264_10360at 2409.315 kb on + strand, within CA264_10360at 2409.315 kb on + strand, within CA264_10360at 2409.315 kb on + strand, within CA264_10360at 2409.327 kb on + strand, within CA264_10360at 2409.327 kb on + strand, within CA264_10360at 2409.427 kb on + strand, within CA264_10360at 2409.498 kb on + strand, within CA264_10360at 2409.498 kb on + strand, within CA264_10360at 2409.498 kb on + strand, within CA264_10360at 2409.505 kb on + strand, within CA264_10360at 2409.561 kb on + strand, within CA264_10360at 2409.645 kb on + strand, within CA264_10360at 2409.714 kb on + strand, within CA264_10360at 2410.126 kb on + strand, within CA264_10365at 2410.187 kb on + strand, within CA264_10365at 2410.348 kb on + strandat 2410.377 kb on + strandat 2410.436 kb on + strandat 2410.436 kb on + strandat 2410.445 kb on + strandat 2410.476 kb on + strandat 2410.477 kb on - strandat 2410.477 kb on - strandat 2410.477 kb on - strandat 2410.484 kb on - strandat 2410.484 kb on - strandat 2410.535 kb on + strandat 2410.544 kb on + strandat 2410.544 kb on + strandat 2410.547 kb on + strandat 2410.548 kb on - strandat 2410.593 kb on + strandat 2410.626 kb on + strandat 2410.656 kb on + strandat 2410.680 kb on + strandat 2410.744 kb on + strandat 2410.748 kb on + strandat 2410.748 kb on + strandat 2410.748 kb on + strandat 2410.749 kb on - strandat 2410.749 kb on - strandat 2410.760 kb on + strandat 2410.760 kb on + strandat 2410.760 kb on + strandat 2410.761 kb on - strandat 2410.766 kb on + strandat 2410.778 kb on + strandat 2410.778 kb on + strandat 2410.782 kb on + strandat 2410.791 kb on - strandat 2410.810 kb on + strandat 2410.850 kb on + strandat 2410.850 kb on + strandat 2410.851 kb on - strandat 2410.864 kb on + strandat 2410.866 kb on + strandat 2410.867 kb on - strandat 2410.867 kb on - strandat 2410.906 kb on - strandat 2410.918 kb on - strandat 2410.918 kb on - strandat 2410.977 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml
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2,408,033 + CA264_10355 0.38 +0.0
2,408,054 + CA264_10355 0.40 -0.0
2,408,055 - CA264_10355 0.40 -0.1
2,408,055 - CA264_10355 0.40 -0.2
2,408,082 + CA264_10355 0.42 -0.3
2,408,091 + CA264_10355 0.42 -1.0
2,408,150 - CA264_10355 0.46 -0.5
2,408,164 - CA264_10355 0.47 -0.5
2,408,222 + CA264_10355 0.51 -2.6
2,408,296 - CA264_10355 0.56 +0.4
2,408,309 + CA264_10355 0.57 -0.4
2,408,310 - CA264_10355 0.57 -0.0
2,408,310 - CA264_10355 0.57 -1.1
2,408,330 + CA264_10355 0.58 -0.4
2,408,330 + CA264_10355 0.58 -0.6
2,408,331 - CA264_10355 0.58 +0.3
2,408,411 - CA264_10355 0.64 -0.8
2,408,414 - CA264_10355 0.64 +0.6
2,408,474 + CA264_10355 0.68 -0.3
2,408,508 + CA264_10355 0.70 -2.7
2,408,509 - CA264_10355 0.70 -0.6
2,408,518 + CA264_10355 0.71 -1.3
2,408,602 + CA264_10355 0.77 -1.1
2,408,603 - CA264_10355 0.77 -0.4
2,408,606 + CA264_10355 0.77 +0.3
2,408,606 + CA264_10355 0.77 +0.1
2,408,606 + CA264_10355 0.77 +0.1
2,408,607 - CA264_10355 0.77 -0.7
2,408,607 - CA264_10355 0.77 -0.0
2,408,614 + CA264_10355 0.77 -0.7
2,408,624 - CA264_10355 0.78 -0.9
2,408,671 + CA264_10355 0.81 -0.1
2,408,677 - CA264_10355 0.82 -1.4
2,408,712 + CA264_10355 0.84 -0.3
2,408,713 - CA264_10355 0.84 -0.3
2,408,735 + CA264_10355 0.86 +0.3
2,408,736 - CA264_10355 0.86 -0.3
2,408,807 - -2.3
2,408,941 - -1.6
2,408,951 - -0.0
2,409,225 + CA264_10360 0.19 -1.6
2,409,315 + CA264_10360 0.28 -3.1
2,409,315 + CA264_10360 0.28 -1.6
2,409,315 + CA264_10360 0.28 -2.8
2,409,327 + CA264_10360 0.29 -0.4
2,409,327 + CA264_10360 0.29 -2.5
2,409,427 + CA264_10360 0.39 -2.7
2,409,498 + CA264_10360 0.46 -1.4
2,409,498 + CA264_10360 0.46 -2.8
2,409,498 + CA264_10360 0.46 -0.1
2,409,505 + CA264_10360 0.47 -2.2
2,409,561 + CA264_10360 0.52 -2.4
2,409,645 + CA264_10360 0.61 -1.7
2,409,714 + CA264_10360 0.67 -1.7
2,410,126 + CA264_10365 0.42 +0.3
2,410,187 + CA264_10365 0.71 -0.9
2,410,348 + -2.7
2,410,377 + -1.3
2,410,436 + -0.5
2,410,436 + -0.8
2,410,445 + -0.2
2,410,476 + +0.0
2,410,477 - -0.7
2,410,477 - -0.3
2,410,477 - -1.0
2,410,484 - -3.2
2,410,484 - -2.6
2,410,535 + +0.5
2,410,544 + -1.2
2,410,544 + +0.1
2,410,547 + -0.4
2,410,548 - -2.9
2,410,593 + -0.0
2,410,626 + +0.2
2,410,656 + -2.3
2,410,680 + -0.9
2,410,744 + +0.2
2,410,748 + +0.4
2,410,748 + +1.8
2,410,748 + -0.3
2,410,749 - +0.3
2,410,749 - -0.6
2,410,760 + -1.4
2,410,760 + -0.4
2,410,760 + -1.4
2,410,761 - -0.1
2,410,766 + -0.8
2,410,778 + -1.9
2,410,778 + -0.4
2,410,782 + -0.2
2,410,791 - -0.6
2,410,810 + +0.1
2,410,850 + -1.1
2,410,850 + -0.1
2,410,851 - +2.1
2,410,864 + -0.3
2,410,866 + +0.2
2,410,867 - +0.3
2,410,867 - -0.1
2,410,906 - -0.2
2,410,918 - -0.4
2,410,918 - -0.6
2,410,977 - -1.4

Or see this region's nucleotide sequence