Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09870 and CA264_09875 are separated by 139 nucleotides CA264_09875 and CA264_09880 overlap by 14 nucleotides
CA264_09870: CA264_09870 - hypothetical protein, at 2,297,364 to 2,298,143
_09870
CA264_09875: CA264_09875 - hypothetical protein, at 2,298,283 to 2,299,863
_09875
CA264_09880: CA264_09880 - hypothetical protein, at 2,299,850 to 2,301,601
_09880
Position (kb)
2298
2299
2300 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2297.283 kb on - strand at 2297.283 kb on - strand at 2297.284 kb on + strand at 2297.285 kb on - strand at 2297.290 kb on + strand at 2297.386 kb on - strand at 2297.388 kb on + strand at 2297.481 kb on + strand, within CA264_09870 at 2297.521 kb on + strand, within CA264_09870 at 2297.522 kb on - strand, within CA264_09870 at 2297.522 kb on - strand, within CA264_09870 at 2297.542 kb on + strand, within CA264_09870 at 2297.542 kb on + strand, within CA264_09870 at 2297.542 kb on + strand, within CA264_09870 at 2297.698 kb on - strand, within CA264_09870 at 2297.698 kb on - strand, within CA264_09870 at 2297.822 kb on - strand, within CA264_09870 at 2297.830 kb on - strand, within CA264_09870 at 2297.834 kb on - strand, within CA264_09870 at 2297.876 kb on + strand, within CA264_09870 at 2297.876 kb on + strand, within CA264_09870 at 2297.877 kb on - strand, within CA264_09870 at 2297.880 kb on + strand, within CA264_09870 at 2297.927 kb on - strand, within CA264_09870 at 2298.039 kb on + strand, within CA264_09870 at 2298.039 kb on + strand, within CA264_09870 at 2298.039 kb on + strand, within CA264_09870 at 2298.040 kb on - strand, within CA264_09870 at 2298.040 kb on - strand, within CA264_09870 at 2298.040 kb on - strand, within CA264_09870 at 2298.098 kb on + strand at 2298.099 kb on - strand at 2298.104 kb on + strand at 2298.106 kb on + strand at 2298.142 kb on - strand at 2298.200 kb on + strand at 2298.213 kb on + strand at 2298.213 kb on + strand at 2298.221 kb on + strand at 2298.284 kb on + strand at 2298.285 kb on - strand at 2298.320 kb on - strand at 2298.320 kb on - strand at 2298.364 kb on + strand at 2298.377 kb on + strand at 2298.449 kb on + strand, within CA264_09875 at 2298.450 kb on - strand, within CA264_09875 at 2298.521 kb on + strand, within CA264_09875 at 2298.521 kb on + strand, within CA264_09875 at 2298.522 kb on - strand, within CA264_09875 at 2298.524 kb on + strand, within CA264_09875 at 2298.524 kb on + strand, within CA264_09875 at 2298.530 kb on + strand, within CA264_09875 at 2298.597 kb on + strand, within CA264_09875 at 2298.599 kb on + strand, within CA264_09875 at 2298.600 kb on - strand, within CA264_09875 at 2298.603 kb on + strand, within CA264_09875 at 2298.604 kb on - strand, within CA264_09875 at 2298.604 kb on - strand, within CA264_09875 at 2298.617 kb on + strand, within CA264_09875 at 2298.617 kb on + strand, within CA264_09875 at 2298.711 kb on + strand, within CA264_09875 at 2298.711 kb on + strand, within CA264_09875 at 2298.744 kb on + strand, within CA264_09875 at 2298.745 kb on - strand, within CA264_09875 at 2298.752 kb on + strand, within CA264_09875 at 2298.752 kb on + strand, within CA264_09875 at 2298.753 kb on - strand, within CA264_09875 at 2298.753 kb on - strand, within CA264_09875 at 2298.988 kb on - strand, within CA264_09875 at 2299.001 kb on - strand, within CA264_09875 at 2299.001 kb on - strand, within CA264_09875 at 2299.076 kb on + strand, within CA264_09875 at 2299.076 kb on - strand, within CA264_09875 at 2299.209 kb on - strand, within CA264_09875 at 2299.209 kb on - strand, within CA264_09875 at 2299.263 kb on + strand, within CA264_09875 at 2299.292 kb on + strand, within CA264_09875 at 2299.292 kb on + strand, within CA264_09875 at 2299.295 kb on - strand, within CA264_09875 at 2299.295 kb on - strand, within CA264_09875 at 2299.295 kb on - strand, within CA264_09875 at 2299.313 kb on + strand, within CA264_09875 at 2299.313 kb on + strand, within CA264_09875 at 2299.317 kb on + strand, within CA264_09875 at 2299.317 kb on + strand, within CA264_09875 at 2299.320 kb on - strand, within CA264_09875 at 2299.499 kb on + strand, within CA264_09875 at 2299.499 kb on + strand, within CA264_09875 at 2299.502 kb on + strand, within CA264_09875 at 2299.502 kb on + strand, within CA264_09875 at 2299.503 kb on - strand, within CA264_09875 at 2299.503 kb on - strand, within CA264_09875 at 2299.503 kb on - strand, within CA264_09875 at 2299.503 kb on - strand, within CA264_09875 at 2299.505 kb on + strand, within CA264_09875 at 2299.549 kb on - strand, within CA264_09875 at 2299.630 kb on + strand, within CA264_09875 at 2299.630 kb on + strand, within CA264_09875 at 2299.631 kb on - strand, within CA264_09875 at 2299.637 kb on - strand, within CA264_09875 at 2299.719 kb on - strand at 2299.719 kb on - strand at 2299.742 kb on + strand at 2299.743 kb on - strand at 2299.743 kb on - strand at 2299.811 kb on - strand at 2299.863 kb on + strand at 2299.864 kb on - strand at 2299.864 kb on - strand at 2299.877 kb on - strand at 2299.939 kb on + strand at 2299.944 kb on + strand at 2300.020 kb on + strand at 2300.040 kb on + strand, within CA264_09880 at 2300.041 kb on - strand, within CA264_09880 at 2300.041 kb on - strand, within CA264_09880 at 2300.157 kb on + strand, within CA264_09880 at 2300.157 kb on + strand, within CA264_09880 at 2300.157 kb on + strand, within CA264_09880 at 2300.157 kb on + strand, within CA264_09880 at 2300.158 kb on - strand, within CA264_09880 at 2300.161 kb on + strand, within CA264_09880 at 2300.181 kb on + strand, within CA264_09880 at 2300.181 kb on + strand, within CA264_09880 at 2300.199 kb on + strand, within CA264_09880 at 2300.200 kb on - strand, within CA264_09880 at 2300.219 kb on + strand, within CA264_09880 at 2300.231 kb on + strand, within CA264_09880 at 2300.311 kb on - strand, within CA264_09880 at 2300.338 kb on + strand, within CA264_09880 at 2300.358 kb on + strand, within CA264_09880 at 2300.358 kb on + strand, within CA264_09880 at 2300.359 kb on - strand, within CA264_09880 at 2300.359 kb on - strand, within CA264_09880 at 2300.360 kb on + strand, within CA264_09880 at 2300.360 kb on + strand, within CA264_09880 at 2300.361 kb on - strand, within CA264_09880 at 2300.361 kb on - strand, within CA264_09880 at 2300.440 kb on - strand, within CA264_09880 at 2300.446 kb on - strand, within CA264_09880 at 2300.469 kb on - strand, within CA264_09880 at 2300.503 kb on - strand, within CA264_09880 at 2300.538 kb on + strand, within CA264_09880 at 2300.538 kb on + strand, within CA264_09880 at 2300.598 kb on + strand, within CA264_09880 at 2300.598 kb on + strand, within CA264_09880 at 2300.631 kb on - strand, within CA264_09880 at 2300.643 kb on + strand, within CA264_09880 at 2300.787 kb on - strand, within CA264_09880 at 2300.813 kb on + strand, within CA264_09880 at 2300.814 kb on - strand, within CA264_09880
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 2,297,283 - +0.4 2,297,283 - -1.0 2,297,284 + +0.2 2,297,285 - -1.7 2,297,290 + -1.3 2,297,386 - -1.6 2,297,388 + -1.0 2,297,481 + CA264_09870 0.15 -0.1 2,297,521 + CA264_09870 0.20 +0.6 2,297,522 - CA264_09870 0.20 +0.4 2,297,522 - CA264_09870 0.20 -1.1 2,297,542 + CA264_09870 0.23 +0.3 2,297,542 + CA264_09870 0.23 -0.1 2,297,542 + CA264_09870 0.23 +0.2 2,297,698 - CA264_09870 0.43 +0.6 2,297,698 - CA264_09870 0.43 -1.3 2,297,822 - CA264_09870 0.59 +0.8 2,297,830 - CA264_09870 0.60 -0.6 2,297,834 - CA264_09870 0.60 -0.9 2,297,876 + CA264_09870 0.66 +0.3 2,297,876 + CA264_09870 0.66 +0.9 2,297,877 - CA264_09870 0.66 -0.6 2,297,880 + CA264_09870 0.66 +0.2 2,297,927 - CA264_09870 0.72 -0.4 2,298,039 + CA264_09870 0.87 +0.3 2,298,039 + CA264_09870 0.87 -0.2 2,298,039 + CA264_09870 0.87 -0.3 2,298,040 - CA264_09870 0.87 -0.9 2,298,040 - CA264_09870 0.87 +0.0 2,298,040 - CA264_09870 0.87 +0.7 2,298,098 + -0.7 2,298,099 - -0.5 2,298,104 + -0.0 2,298,106 + -0.1 2,298,142 - -0.2 2,298,200 + -1.4 2,298,213 + -0.9 2,298,213 + -0.1 2,298,221 + +0.4 2,298,284 + +0.6 2,298,285 - -1.2 2,298,320 - -0.7 2,298,320 - -0.7 2,298,364 + -0.9 2,298,377 + -0.6 2,298,449 + CA264_09875 0.10 -2.5 2,298,450 - CA264_09875 0.11 -0.1 2,298,521 + CA264_09875 0.15 -1.4 2,298,521 + CA264_09875 0.15 +0.4 2,298,522 - CA264_09875 0.15 +0.0 2,298,524 + CA264_09875 0.15 -1.3 2,298,524 + CA264_09875 0.15 +0.5 2,298,530 + CA264_09875 0.16 -1.2 2,298,597 + CA264_09875 0.20 +0.9 2,298,599 + CA264_09875 0.20 +1.6 2,298,600 - CA264_09875 0.20 -0.5 2,298,603 + CA264_09875 0.20 -1.0 2,298,604 - CA264_09875 0.20 -0.8 2,298,604 - CA264_09875 0.20 -0.1 2,298,617 + CA264_09875 0.21 -0.4 2,298,617 + CA264_09875 0.21 -1.7 2,298,711 + CA264_09875 0.27 -0.1 2,298,711 + CA264_09875 0.27 -0.5 2,298,744 + CA264_09875 0.29 -1.0 2,298,745 - CA264_09875 0.29 -0.5 2,298,752 + CA264_09875 0.30 +0.7 2,298,752 + CA264_09875 0.30 +0.1 2,298,753 - CA264_09875 0.30 -0.6 2,298,753 - CA264_09875 0.30 +0.1 2,298,988 - CA264_09875 0.45 -0.3 2,299,001 - CA264_09875 0.45 -0.8 2,299,001 - CA264_09875 0.45 -0.2 2,299,076 + CA264_09875 0.50 -0.1 2,299,076 - CA264_09875 0.50 +0.3 2,299,209 - CA264_09875 0.59 +0.4 2,299,209 - CA264_09875 0.59 -1.4 2,299,263 + CA264_09875 0.62 +1.3 2,299,292 + CA264_09875 0.64 -0.2 2,299,292 + CA264_09875 0.64 -1.5 2,299,295 - CA264_09875 0.64 -0.1 2,299,295 - CA264_09875 0.64 +1.0 2,299,295 - CA264_09875 0.64 -0.1 2,299,313 + CA264_09875 0.65 -0.4 2,299,313 + CA264_09875 0.65 -0.6 2,299,317 + CA264_09875 0.65 -0.6 2,299,317 + CA264_09875 0.65 -2.1 2,299,320 - CA264_09875 0.66 +0.1 2,299,499 + CA264_09875 0.77 -0.6 2,299,499 + CA264_09875 0.77 -0.6 2,299,502 + CA264_09875 0.77 +1.2 2,299,502 + CA264_09875 0.77 +0.4 2,299,503 - CA264_09875 0.77 -0.2 2,299,503 - CA264_09875 0.77 -0.3 2,299,503 - CA264_09875 0.77 +1.3 2,299,503 - CA264_09875 0.77 -0.1 2,299,505 + CA264_09875 0.77 -1.7 2,299,549 - CA264_09875 0.80 +0.1 2,299,630 + CA264_09875 0.85 +0.1 2,299,630 + CA264_09875 0.85 +1.3 2,299,631 - CA264_09875 0.85 -1.0 2,299,637 - CA264_09875 0.86 +1.1 2,299,719 - +0.5 2,299,719 - +0.1 2,299,742 + +1.6 2,299,743 - -1.3 2,299,743 - +0.8 2,299,811 - -2.5 2,299,863 + -0.3 2,299,864 - -1.3 2,299,864 - -0.0 2,299,877 - +0.4 2,299,939 + -0.2 2,299,944 + -0.2 2,300,020 + -0.1 2,300,040 + CA264_09880 0.11 -0.2 2,300,041 - CA264_09880 0.11 +0.7 2,300,041 - CA264_09880 0.11 -1.6 2,300,157 + CA264_09880 0.18 -0.2 2,300,157 + CA264_09880 0.18 +1.0 2,300,157 + CA264_09880 0.18 -0.6 2,300,157 + CA264_09880 0.18 +0.1 2,300,158 - CA264_09880 0.18 +0.2 2,300,161 + CA264_09880 0.18 -0.9 2,300,181 + CA264_09880 0.19 +0.4 2,300,181 + CA264_09880 0.19 +0.0 2,300,199 + CA264_09880 0.20 +1.3 2,300,200 - CA264_09880 0.20 -0.7 2,300,219 + CA264_09880 0.21 -0.5 2,300,231 + CA264_09880 0.22 +0.6 2,300,311 - CA264_09880 0.26 -0.4 2,300,338 + CA264_09880 0.28 -0.6 2,300,358 + CA264_09880 0.29 +0.1 2,300,358 + CA264_09880 0.29 +0.0 2,300,359 - CA264_09880 0.29 -0.1 2,300,359 - CA264_09880 0.29 -0.7 2,300,360 + CA264_09880 0.29 +0.9 2,300,360 + CA264_09880 0.29 -0.4 2,300,361 - CA264_09880 0.29 -1.0 2,300,361 - CA264_09880 0.29 -1.8 2,300,440 - CA264_09880 0.34 -0.0 2,300,446 - CA264_09880 0.34 -0.1 2,300,469 - CA264_09880 0.35 -1.1 2,300,503 - CA264_09880 0.37 -1.9 2,300,538 + CA264_09880 0.39 -0.2 2,300,538 + CA264_09880 0.39 -0.1 2,300,598 + CA264_09880 0.43 -0.4 2,300,598 + CA264_09880 0.43 +0.1 2,300,631 - CA264_09880 0.45 -0.0 2,300,643 + CA264_09880 0.45 +2.4 2,300,787 - CA264_09880 0.53 -1.6 2,300,813 + CA264_09880 0.55 -0.1 2,300,814 - CA264_09880 0.55 +0.4
Or see this region's nucleotide sequence