Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_04975 and CA264_04980 are separated by 244 nucleotides CA264_04980 and CA264_04985 overlap by 1 nucleotides CA264_04985 and CA264_04990 are separated by 3 nucleotides
CA264_04975: CA264_04975 - hypothetical protein, at 1,155,434 to 1,156,057
_04975
CA264_04980: CA264_04980 - tRNA(5-methylaminomethyl-2-thiouridine)- methyltransferase, at 1,156,302 to 1,157,429
_04980
CA264_04985: CA264_04985 - hypothetical protein, at 1,157,429 to 1,158,184
_04985
CA264_04990: CA264_04990 - T9SS C-terminal target domain-containing protein, at 1,158,188 to 1,159,852
_04990
Position (kb)
1156
1157
1158 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1155.316 kb on - strand at 1155.394 kb on - strand at 1155.414 kb on + strand at 1155.414 kb on + strand at 1155.446 kb on + strand at 1156.049 kb on + strand at 1156.213 kb on + strand at 1156.221 kb on + strand at 1156.221 kb on + strand at 1156.222 kb on - strand at 1156.222 kb on - strand at 1156.222 kb on - strand at 1156.249 kb on - strand at 1156.288 kb on + strand at 1156.289 kb on - strand at 1157.396 kb on + strand at 1157.406 kb on + strand at 1157.531 kb on + strand, within CA264_04985 at 1157.562 kb on - strand, within CA264_04985 at 1157.568 kb on + strand, within CA264_04985 at 1157.583 kb on - strand, within CA264_04985 at 1157.669 kb on + strand, within CA264_04985 at 1157.730 kb on - strand, within CA264_04985 at 1157.862 kb on - strand, within CA264_04985 at 1157.895 kb on - strand, within CA264_04985 at 1157.913 kb on - strand, within CA264_04985 at 1157.913 kb on - strand, within CA264_04985 at 1157.913 kb on - strand, within CA264_04985 at 1157.914 kb on + strand, within CA264_04985 at 1157.914 kb on + strand, within CA264_04985 at 1157.914 kb on + strand, within CA264_04985 at 1157.915 kb on - strand, within CA264_04985 at 1157.915 kb on - strand, within CA264_04985 at 1157.915 kb on - strand, within CA264_04985 at 1157.918 kb on + strand, within CA264_04985 at 1157.919 kb on - strand, within CA264_04985 at 1158.035 kb on + strand, within CA264_04985 at 1158.036 kb on - strand, within CA264_04985 at 1158.059 kb on + strand, within CA264_04985 at 1158.059 kb on + strand, within CA264_04985 at 1158.068 kb on + strand, within CA264_04985 at 1158.069 kb on - strand, within CA264_04985 at 1158.083 kb on + strand, within CA264_04985 at 1158.116 kb on + strand at 1158.121 kb on + strand at 1158.182 kb on + strand at 1158.187 kb on + strand at 1158.187 kb on + strand at 1158.188 kb on - strand at 1158.207 kb on - strand at 1158.207 kb on - strand at 1158.256 kb on + strand at 1158.257 kb on - strand at 1158.264 kb on + strand at 1158.282 kb on + strand at 1158.286 kb on - strand at 1158.287 kb on + strand at 1158.288 kb on - strand at 1158.314 kb on + strand at 1158.314 kb on + strand at 1158.314 kb on + strand at 1158.420 kb on - strand, within CA264_04990
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 1,155,316 - -0.2 1,155,394 - +0.8 1,155,414 + +0.6 1,155,414 + +1.4 1,155,446 + +0.5 1,156,049 + -0.7 1,156,213 + +1.7 1,156,221 + -0.7 1,156,221 + -0.2 1,156,222 - -0.2 1,156,222 - +0.0 1,156,222 - +2.3 1,156,249 - -0.4 1,156,288 + -0.3 1,156,289 - +1.0 1,157,396 + -0.4 1,157,406 + -0.9 1,157,531 + CA264_04985 0.13 -1.7 1,157,562 - CA264_04985 0.18 -0.4 1,157,568 + CA264_04985 0.18 -1.9 1,157,583 - CA264_04985 0.20 -0.5 1,157,669 + CA264_04985 0.32 +0.8 1,157,730 - CA264_04985 0.40 -1.5 1,157,862 - CA264_04985 0.57 -0.3 1,157,895 - CA264_04985 0.62 -0.4 1,157,913 - CA264_04985 0.64 +0.8 1,157,913 - CA264_04985 0.64 -1.9 1,157,913 - CA264_04985 0.64 -0.0 1,157,914 + CA264_04985 0.64 -2.1 1,157,914 + CA264_04985 0.64 -1.4 1,157,914 + CA264_04985 0.64 -0.2 1,157,915 - CA264_04985 0.64 +0.2 1,157,915 - CA264_04985 0.64 -1.9 1,157,915 - CA264_04985 0.64 -0.1 1,157,918 + CA264_04985 0.65 -2.3 1,157,919 - CA264_04985 0.65 +1.6 1,158,035 + CA264_04985 0.80 -1.4 1,158,036 - CA264_04985 0.80 -0.6 1,158,059 + CA264_04985 0.83 -1.9 1,158,059 + CA264_04985 0.83 -1.8 1,158,068 + CA264_04985 0.85 -1.1 1,158,069 - CA264_04985 0.85 -1.2 1,158,083 + CA264_04985 0.87 -1.5 1,158,116 + -0.9 1,158,121 + -1.6 1,158,182 + +0.0 1,158,187 + -1.0 1,158,187 + -1.9 1,158,188 - -0.1 1,158,207 - +0.3 1,158,207 - +2.2 1,158,256 + -0.7 1,158,257 - -0.2 1,158,264 + +0.6 1,158,282 + +0.9 1,158,286 - +0.2 1,158,287 + -0.6 1,158,288 - -0.5 1,158,314 + +0.8 1,158,314 + +1.4 1,158,314 + +0.4 1,158,420 - CA264_04990 0.14 +0.9
Or see this region's nucleotide sequence