Strain Fitness in Magnetospirillum magneticum AMB-1 around AMB_RS15785

Experiment: 150_mag_1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAMB_RS15780 and AMB_RS15785 are separated by 32 nucleotidesAMB_RS15785 and AMB_RS15790 are separated by 18 nucleotidesAMB_RS15790 and AMB_RS15795 are separated by 12 nucleotides AMB_RS15780: AMB_RS15780 - elongation factor Tu, at 3,377,433 to 3,378,623 _RS15780 AMB_RS15785: AMB_RS15785 - elongation factor G, at 3,378,656 to 3,380,740 _RS15785 AMB_RS15790: AMB_RS15790 - 30S ribosomal protein S7, at 3,380,759 to 3,381,229 _RS15790 AMB_RS15795: AMB_RS15795 - 30S ribosomal protein S12, at 3,381,242 to 3,381,613 _RS15795 Position (kb) 3378 3379 3380 3381Strain fitness (log2 ratio) -1 0 1at 3378.645 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 150_mag_1
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3,378,645 + -0.7

Or see this region's nucleotide sequence