Strain Fitness in Magnetospirillum magneticum AMB-1 around AMB_RS04945

Experiment: 150_mag_1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	150_mag_1
1,026,493	-		AMB_RS23165	0.74	-4.2
1,026,705	+		AMB_RS23165	0.89	-0.8
1,026,705	+		AMB_RS23165	0.89	-0.4
1,026,706	-		AMB_RS23165	0.89	-1.2
1,026,706	-		AMB_RS23165	0.89	-3.1
1,026,799	-				-4.2
1,026,894	+				-0.3
1,026,894	+				-0.1
1,026,895	-				-3.5
1,026,895	-				-1.7
1,026,983	+				-3.0
1,026,983	+				-2.2
1,026,983	+				-2.3
1,027,080	+		AMB_RS04945	0.16	-3.4
1,027,080	+		AMB_RS04945	0.16	-1.9
1,027,080	+		AMB_RS04945	0.16	-2.5
1,027,080	+		AMB_RS04945	0.16	-0.3
1,027,081	-		AMB_RS04945	0.16	-1.7
1,027,081	-		AMB_RS04945	0.16	-2.6
1,027,081	-		AMB_RS04945	0.16	-1.7
1,027,081	-		AMB_RS04945	0.16	-3.7
1,027,081	-		AMB_RS04945	0.16	-5.1
1,027,081	-		AMB_RS04945	0.16	-3.6
1,027,081	-		AMB_RS04945	0.16	-2.2
1,027,116	+		AMB_RS04945	0.19	-3.0
1,027,116	+		AMB_RS04945	0.19	-2.2
1,027,117	-		AMB_RS04945	0.19	-4.6
1,027,117	-		AMB_RS04945	0.19	-1.6
1,027,117	-		AMB_RS04945	0.19	-2.2
1,027,325	+		AMB_RS04945	0.39	-2.4
1,027,333	+		AMB_RS04945	0.40	-1.4
1,027,333	+		AMB_RS04945	0.40	-3.6
1,027,334	-		AMB_RS04945	0.40	-2.1
1,027,334	-		AMB_RS04945	0.40	-2.4
1,027,421	+		AMB_RS04945	0.48	-3.6
1,027,421	+		AMB_RS04945	0.48	-4.3
1,027,422	-		AMB_RS04945	0.48	-1.7
1,027,422	-		AMB_RS04945	0.48	-1.8
1,027,422	-		AMB_RS04945	0.48	-4.0
1,027,422	-		AMB_RS04945	0.48	-3.0
1,027,466	+		AMB_RS04945	0.52	-4.1
1,027,488	+		AMB_RS04945	0.55	-3.2
1,027,488	+		AMB_RS04945	0.55	-2.2
1,027,488	+		AMB_RS04945	0.55	-1.6
1,027,488	+		AMB_RS04945	0.55	-2.9
1,027,488	+		AMB_RS04945	0.55	-2.8
1,027,488	+		AMB_RS04945	0.55	-2.6
1,027,488	+		AMB_RS04945	0.55	-2.8
1,027,488	+		AMB_RS04945	0.55	-2.3
1,027,488	+		AMB_RS04945	0.55	-2.8
1,027,488	+		AMB_RS04945	0.55	-0.8
1,027,488	+		AMB_RS04945	0.55	-3.0
1,027,488	+		AMB_RS04945	0.55	-1.7
1,027,488	+		AMB_RS04945	0.55	-2.6
1,027,488	+		AMB_RS04945	0.55	-3.8
1,027,488	+		AMB_RS04945	0.55	-5.3
1,027,488	+		AMB_RS04945	0.55	-4.3
1,027,488	+		AMB_RS04945	0.55	-1.3
1,027,488	+		AMB_RS04945	0.55	-2.4
1,027,488	+		AMB_RS04945	0.55	-4.8
1,027,488	+		AMB_RS04945	0.55	-3.4
1,027,489	-		AMB_RS04945	0.55	-2.5
1,027,489	-		AMB_RS04945	0.55	-4.4
1,027,489	-		AMB_RS04945	0.55	-4.3
1,027,489	-		AMB_RS04945	0.55	-3.6
1,027,489	-		AMB_RS04945	0.55	-4.0
1,027,489	-		AMB_RS04945	0.55	-2.8
1,027,489	-		AMB_RS04945	0.55	-1.6
1,027,489	-		AMB_RS04945	0.55	-3.2
1,027,489	-		AMB_RS04945	0.55	-0.3
1,027,489	-		AMB_RS04945	0.55	-2.5
1,027,489	-		AMB_RS04945	0.55	-2.0
1,027,489	-		AMB_RS04945	0.55	-4.1
1,027,489	-		AMB_RS04945	0.55	-2.8
1,027,489	-		AMB_RS04945	0.55	-4.6
1,027,489	-		AMB_RS04945	0.55	-3.3
1,027,489	-		AMB_RS04945	0.55	-3.6
1,027,489	-		AMB_RS04945	0.55	+0.6
1,027,489	-		AMB_RS04945	0.55	-3.1
1,027,489	-		AMB_RS04945	0.55	-1.7
1,027,489	-		AMB_RS04945	0.55	-3.2
1,027,489	-		AMB_RS04945	0.55	-0.4
1,027,489	-		AMB_RS04945	0.55	-1.3
1,027,489	-		AMB_RS04945	0.55	-2.5
1,027,489	-		AMB_RS04945	0.55	-2.6
1,027,489	-		AMB_RS04945	0.55	-3.8
1,027,489	-		AMB_RS04945	0.55	-3.1
1,027,700	+		AMB_RS04945	0.75	-1.0
1,027,744	-		AMB_RS04945	0.79	-1.6
1,027,813	-		AMB_RS04945	0.86	-3.5
1,027,813	-		AMB_RS04945	0.86	-3.0
1,027,813	-		AMB_RS04945	0.86	-0.7
1,027,813	-		AMB_RS04945	0.86	-4.1
1,027,813	-		AMB_RS04945	0.86	-1.0
1,027,813	-		AMB_RS04945	0.86	-2.3
1,027,926	+				-0.4
1,027,926	+				-1.0
1,027,926	+				-0.1
1,027,927	-				-2.8
1,027,978	+				-1.0
1,027,993	+				-0.3
1,028,005	+				-1.0
1,028,005	+				-0.9
1,028,005	+				-2.2
1,028,006	-				-2.6
1,028,006	-				-4.1
1,028,006	-				-1.7
1,028,021	+				-3.7
1,028,021	+				-1.7
1,028,021	+				-3.9
1,028,021	+				-3.1
1,028,021	+				-2.8
1,028,021	+				-4.0
1,028,021	+				-2.4
1,028,022	-				-4.3
1,028,022	-				-3.6
1,028,022	-				-3.9
1,028,022	-				-2.2
1,028,022	-				-3.0
1,028,022	-				-3.0
1,028,022	-				-4.2
1,028,022	-				-3.4
1,028,085	+		AMB_RS04950	0.29	-1.0
1,028,085	+		AMB_RS04950	0.29	-3.9
1,028,085	+		AMB_RS04950	0.29	-3.6
1,028,085	+		AMB_RS04950	0.29	-3.5
1,028,086	-		AMB_RS04950	0.29	-0.4
1,028,086	-		AMB_RS04950	0.29	-2.5
1,028,086	-		AMB_RS04950	0.29	-1.5
1,028,086	-		AMB_RS04950	0.29	-2.5
1,028,086	-		AMB_RS04950	0.29	-3.6
1,028,086	-		AMB_RS04950	0.29	-1.9
1,028,086	-		AMB_RS04950	0.29	-1.4
1,028,086	-		AMB_RS04950	0.29	-3.1
1,028,147	+		AMB_RS04950	0.55	-2.7
1,028,147	+		AMB_RS04950	0.55	-2.7
1,028,148	-		AMB_RS04950	0.55	-3.3
1,028,148	-		AMB_RS04950	0.55	-1.7
1,028,299	+				-1.7
1,028,299	+				-2.6
1,028,299	+				+0.1
1,028,299	+				-1.2
1,028,299	+				-2.7
1,028,299	+				-3.0
1,028,299	+				-1.8
1,028,299	+				-3.3
1,028,299	+				-1.4
1,028,300	-				-2.3
1,028,300	-				-2.9
1,028,300	-				-2.8
1,028,300	-				+0.6
1,028,300	-				-3.7
1,028,300	-				-3.0
1,028,362	+				-2.5
1,028,363	-				-4.7
1,028,363	-				-2.9
1,028,363	-				-3.2
1,028,363	-				-3.8
1,028,363	-				-1.6
1,028,363	-				-3.2
1,028,371	+				-1.9
1,028,371	+				-2.6
1,028,371	+				-2.0
1,028,372	-				-2.5
1,028,372	-				-3.1
1,028,372	-				-1.7
1,028,372	-				-1.4
1,028,372	-				-2.8
1,028,372	-				-3.1
1,028,439	+		AMB_RS04955	0.14	-3.0
1,028,439	+		AMB_RS04955	0.14	-3.8
1,028,439	+		AMB_RS04955	0.14	-3.8
1,028,439	+		AMB_RS04955	0.14	+0.6
1,028,439	+		AMB_RS04955	0.14	-3.5
1,028,439	+		AMB_RS04955	0.14	-1.2
1,028,439	+		AMB_RS04955	0.14	-3.3
1,028,439	+		AMB_RS04955	0.14	-2.1
1,028,439	+		AMB_RS04955	0.14	-1.9
1,028,439	+		AMB_RS04955	0.14	-3.7
1,028,439	+		AMB_RS04955	0.14	-3.8
1,028,439	+		AMB_RS04955	0.14	-3.4
1,028,439	+		AMB_RS04955	0.14	-3.1
1,028,439	+		AMB_RS04955	0.14	-1.4
1,028,440	-		AMB_RS04955	0.14	-3.1
1,028,440	-		AMB_RS04955	0.14	-3.6
1,028,440	-		AMB_RS04955	0.14	-4.7
1,028,440	-		AMB_RS04955	0.14	-0.4
1,028,440	-		AMB_RS04955	0.14	-4.4
1,028,440	-		AMB_RS04955	0.14	-2.9
1,028,440	-		AMB_RS04955	0.14	-3.6
1,028,440	-		AMB_RS04955	0.14	-3.3
1,028,592	+		AMB_RS04955	0.30	-2.0
1,028,592	+		AMB_RS04955	0.30	+0.6
1,028,593	-		AMB_RS04955	0.30	-3.8
1,028,593	-		AMB_RS04955	0.30	-2.3
1,028,703	+		AMB_RS04955	0.42	-3.1
1,028,703	+		AMB_RS04955	0.42	-4.2
1,028,703	+		AMB_RS04955	0.42	-3.6
1,028,703	+		AMB_RS04955	0.42	-3.2
1,028,703	+		AMB_RS04955	0.42	-3.3
1,028,703	+		AMB_RS04955	0.42	-1.1
1,028,703	+		AMB_RS04955	0.42	-2.6
1,028,703	+		AMB_RS04955	0.42	-2.0
1,028,703	+		AMB_RS04955	0.42	-3.4
1,028,703	+		AMB_RS04955	0.42	-2.8
1,028,703	+		AMB_RS04955	0.42	-2.7
1,028,703	+		AMB_RS04955	0.42	-3.9
1,028,703	+		AMB_RS04955	0.42	-4.1
1,028,703	+		AMB_RS04955	0.42	-3.0
1,028,703	+		AMB_RS04955	0.42	-4.8
1,028,703	+		AMB_RS04955	0.42	-3.3
1,028,703	+		AMB_RS04955	0.42	-2.2
1,028,703	+		AMB_RS04955	0.42	-4.3
1,028,703	+		AMB_RS04955	0.42	-2.5
1,028,703	+		AMB_RS04955	0.42	-3.6
1,028,704	-		AMB_RS04955	0.42	-4.0
1,028,704	-		AMB_RS04955	0.42	-0.7
1,028,704	-		AMB_RS04955	0.42	-2.0
1,028,704	-		AMB_RS04955	0.42	-3.5
1,028,704	-		AMB_RS04955	0.42	-3.1
1,028,704	-		AMB_RS04955	0.42	-3.7
1,028,704	-		AMB_RS04955	0.42	-4.7
1,028,704	-		AMB_RS04955	0.42	-1.4
1,028,704	-		AMB_RS04955	0.42	-3.6
1,028,704	-		AMB_RS04955	0.42	-2.7
1,028,704	-		AMB_RS04955	0.42	-4.0
1,028,704	-		AMB_RS04955	0.42	-3.2
1,028,704	-		AMB_RS04955	0.42	-4.0
1,028,704	-		AMB_RS04955	0.42	-2.7
1,028,704	-		AMB_RS04955	0.42	-3.7
1,028,704	-		AMB_RS04955	0.42	-4.2
1,028,704	-		AMB_RS04955	0.42	-2.3
1,028,704	-		AMB_RS04955	0.42	-2.6
1,028,704	-		AMB_RS04955	0.42	-3.0
1,028,704	-		AMB_RS04955	0.42	-3.3
1,028,709	+		AMB_RS04955	0.42	-3.1
1,028,710	-		AMB_RS04955	0.42	-1.1
1,028,710	-		AMB_RS04955	0.42	-2.7
1,028,826	+		AMB_RS04955	0.55	-3.9
1,028,826	+		AMB_RS04955	0.55	-4.9
1,028,826	+		AMB_RS04955	0.55	-2.7
1,028,826	+		AMB_RS04955	0.55	-3.8
1,028,826	+		AMB_RS04955	0.55	-3.3
1,028,826	+		AMB_RS04955	0.55	-4.5
1,028,827	-		AMB_RS04955	0.55	-3.8
1,028,827	-		AMB_RS04955	0.55	-4.3
1,028,827	-		AMB_RS04955	0.55	-4.4
1,028,916	+		AMB_RS04955	0.64	-0.4
1,028,916	+		AMB_RS04955	0.64	-4.2
1,028,917	-		AMB_RS04955	0.64	-1.0
1,028,937	-		AMB_RS04955	0.66	-4.2