Strain Fitness in Bosea sp. OAE506 around ABIE41_RS07930

Experiment: D-Ribose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE41_RS07925 and ABIE41_RS07930 are separated by 296 nucleotidesABIE41_RS07930 and ABIE41_RS07935 are separated by 146 nucleotidesABIE41_RS07935 and ABIE41_RS07940 overlap by 4 nucleotides ABIE41_RS07925: ABIE41_RS07925 - TerC family protein, at 1,629,868 to 1,630,878 _RS07925 ABIE41_RS07930: ABIE41_RS07930 - ABC transporter substrate-binding protein, at 1,631,175 to 1,632,236 _RS07930 ABIE41_RS07935: ABIE41_RS07935 - ABC transporter ATP-binding protein, at 1,632,383 to 1,633,177 _RS07935 ABIE41_RS07940: ABIE41_RS07940 - ABC transporter permease, at 1,633,174 to 1,633,944 _RS07940 Position (kb) 1631 1632 1633Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 1630.241 kb on + strand, within ABIE41_RS07925at 1630.241 kb on + strand, within ABIE41_RS07925at 1630.241 kb on + strand, within ABIE41_RS07925at 1630.359 kb on + strand, within ABIE41_RS07925at 1630.359 kb on + strand, within ABIE41_RS07925at 1630.359 kb on + strand, within ABIE41_RS07925at 1630.360 kb on - strand, within ABIE41_RS07925at 1630.360 kb on - strand, within ABIE41_RS07925at 1630.442 kb on + strand, within ABIE41_RS07925at 1630.443 kb on - strand, within ABIE41_RS07925at 1630.443 kb on - strand, within ABIE41_RS07925at 1630.532 kb on + strand, within ABIE41_RS07925at 1630.625 kb on + strand, within ABIE41_RS07925at 1630.626 kb on - strand, within ABIE41_RS07925at 1630.626 kb on - strand, within ABIE41_RS07925at 1630.721 kb on + strand, within ABIE41_RS07925at 1630.721 kb on + strand, within ABIE41_RS07925at 1630.721 kb on + strand, within ABIE41_RS07925at 1630.721 kb on + strand, within ABIE41_RS07925at 1630.721 kb on + strand, within ABIE41_RS07925at 1630.721 kb on + strand, within ABIE41_RS07925at 1630.721 kb on + strand, within ABIE41_RS07925at 1630.721 kb on + strand, within ABIE41_RS07925at 1630.722 kb on - strand, within ABIE41_RS07925at 1630.722 kb on - strand, within ABIE41_RS07925at 1630.722 kb on - strand, within ABIE41_RS07925at 1630.722 kb on - strand, within ABIE41_RS07925at 1630.722 kb on - strand, within ABIE41_RS07925at 1630.890 kb on + strandat 1630.890 kb on + strandat 1630.891 kb on - strandat 1630.968 kb on + strandat 1631.170 kb on + strandat 1631.170 kb on + strandat 1631.170 kb on + strandat 1631.170 kb on + strandat 1631.170 kb on + strandat 1631.171 kb on - strandat 1631.171 kb on - strandat 1631.370 kb on + strand, within ABIE41_RS07930at 1631.370 kb on + strand, within ABIE41_RS07930at 1631.371 kb on - strand, within ABIE41_RS07930at 1631.454 kb on + strand, within ABIE41_RS07930at 1631.454 kb on + strand, within ABIE41_RS07930at 1631.454 kb on + strand, within ABIE41_RS07930at 1631.454 kb on + strand, within ABIE41_RS07930at 1631.454 kb on + strand, within ABIE41_RS07930at 1631.454 kb on + strand, within ABIE41_RS07930at 1631.454 kb on + strand, within ABIE41_RS07930at 1631.454 kb on + strand, within ABIE41_RS07930at 1631.454 kb on + strand, within ABIE41_RS07930at 1631.454 kb on + strand, within ABIE41_RS07930at 1631.454 kb on + strand, within ABIE41_RS07930at 1631.455 kb on - strand, within ABIE41_RS07930at 1631.455 kb on - strand, within ABIE41_RS07930at 1631.455 kb on - strand, within ABIE41_RS07930at 1631.455 kb on - strand, within ABIE41_RS07930at 1631.455 kb on - strand, within ABIE41_RS07930at 1631.455 kb on - strand, within ABIE41_RS07930at 1631.455 kb on - strand, within ABIE41_RS07930at 1631.455 kb on - strand, within ABIE41_RS07930at 1631.455 kb on - strand, within ABIE41_RS07930at 1631.455 kb on - strand, within ABIE41_RS07930at 1631.455 kb on - strand, within ABIE41_RS07930at 1631.455 kb on - strand, within ABIE41_RS07930at 1631.455 kb on - strand, within ABIE41_RS07930at 1631.455 kb on - strand, within ABIE41_RS07930at 1631.541 kb on + strand, within ABIE41_RS07930at 1631.542 kb on - strand, within ABIE41_RS07930at 1631.790 kb on + strand, within ABIE41_RS07930at 1631.790 kb on + strand, within ABIE41_RS07930at 1631.790 kb on + strand, within ABIE41_RS07930at 1631.790 kb on + strand, within ABIE41_RS07930at 1631.790 kb on + strand, within ABIE41_RS07930at 1631.791 kb on - strand, within ABIE41_RS07930at 1631.791 kb on - strand, within ABIE41_RS07930at 1631.791 kb on - strand, within ABIE41_RS07930at 1631.791 kb on - strand, within ABIE41_RS07930at 1631.791 kb on - strand, within ABIE41_RS07930at 1631.854 kb on - strand, within ABIE41_RS07930at 1632.303 kb on + strandat 1632.304 kb on - strandat 1632.304 kb on - strandat 1632.429 kb on - strandat 1632.429 kb on - strandat 1632.740 kb on + strand, within ABIE41_RS07935at 1632.740 kb on + strand, within ABIE41_RS07935at 1632.741 kb on - strand, within ABIE41_RS07935at 1632.741 kb on - strand, within ABIE41_RS07935at 1632.741 kb on - strand, within ABIE41_RS07935at 1633.106 kb on + strandat 1633.106 kb on + strandat 1633.106 kb on + strandat 1633.106 kb on + strandat 1633.106 kb on + strandat 1633.106 kb on + strandat 1633.107 kb on - strandat 1633.107 kb on - strandat 1633.128 kb on + strandat 1633.150 kb on + strandat 1633.207 kb on + strandat 1633.207 kb on + strandat 1633.207 kb on + strandat 1633.207 kb on + strandat 1633.208 kb on - strandat 1633.208 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Ribose (C)
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1,630,241 + ABIE41_RS07925 0.37 -0.4
1,630,241 + ABIE41_RS07925 0.37 -0.9
1,630,241 + ABIE41_RS07925 0.37 -1.1
1,630,359 + ABIE41_RS07925 0.49 -0.5
1,630,359 + ABIE41_RS07925 0.49 +3.3
1,630,359 + ABIE41_RS07925 0.49 -1.1
1,630,360 - ABIE41_RS07925 0.49 +0.2
1,630,360 - ABIE41_RS07925 0.49 -0.2
1,630,442 + ABIE41_RS07925 0.57 -1.6
1,630,443 - ABIE41_RS07925 0.57 -0.2
1,630,443 - ABIE41_RS07925 0.57 +0.5
1,630,532 + ABIE41_RS07925 0.66 +0.3
1,630,625 + ABIE41_RS07925 0.75 -1.0
1,630,626 - ABIE41_RS07925 0.75 +0.9
1,630,626 - ABIE41_RS07925 0.75 -0.1
1,630,721 + ABIE41_RS07925 0.84 -2.1
1,630,721 + ABIE41_RS07925 0.84 -0.1
1,630,721 + ABIE41_RS07925 0.84 +0.3
1,630,721 + ABIE41_RS07925 0.84 -0.4
1,630,721 + ABIE41_RS07925 0.84 -0.9
1,630,721 + ABIE41_RS07925 0.84 -0.7
1,630,721 + ABIE41_RS07925 0.84 -1.0
1,630,721 + ABIE41_RS07925 0.84 -0.4
1,630,722 - ABIE41_RS07925 0.84 -1.0
1,630,722 - ABIE41_RS07925 0.84 -1.0
1,630,722 - ABIE41_RS07925 0.84 +0.1
1,630,722 - ABIE41_RS07925 0.84 -0.6
1,630,722 - ABIE41_RS07925 0.84 +0.1
1,630,890 + +1.3
1,630,890 + +0.3
1,630,891 - +0.0
1,630,968 + -0.6
1,631,170 + -0.4
1,631,170 + -0.2
1,631,170 + -0.2
1,631,170 + -2.0
1,631,170 + -0.0
1,631,171 - +0.7
1,631,171 - -3.1
1,631,370 + ABIE41_RS07930 0.18 -0.6
1,631,370 + ABIE41_RS07930 0.18 -0.4
1,631,371 - ABIE41_RS07930 0.18 -0.1
1,631,454 + ABIE41_RS07930 0.26 +0.3
1,631,454 + ABIE41_RS07930 0.26 +0.5
1,631,454 + ABIE41_RS07930 0.26 -0.8
1,631,454 + ABIE41_RS07930 0.26 -0.5
1,631,454 + ABIE41_RS07930 0.26 +0.3
1,631,454 + ABIE41_RS07930 0.26 -0.1
1,631,454 + ABIE41_RS07930 0.26 -0.1
1,631,454 + ABIE41_RS07930 0.26 -0.5
1,631,454 + ABIE41_RS07930 0.26 -1.0
1,631,454 + ABIE41_RS07930 0.26 +0.2
1,631,454 + ABIE41_RS07930 0.26 +0.1
1,631,455 - ABIE41_RS07930 0.26 +0.5
1,631,455 - ABIE41_RS07930 0.26 -1.3
1,631,455 - ABIE41_RS07930 0.26 -0.5
1,631,455 - ABIE41_RS07930 0.26 +0.2
1,631,455 - ABIE41_RS07930 0.26 -0.3
1,631,455 - ABIE41_RS07930 0.26 +0.1
1,631,455 - ABIE41_RS07930 0.26 -0.7
1,631,455 - ABIE41_RS07930 0.26 +0.9
1,631,455 - ABIE41_RS07930 0.26 -0.3
1,631,455 - ABIE41_RS07930 0.26 -0.9
1,631,455 - ABIE41_RS07930 0.26 -0.6
1,631,455 - ABIE41_RS07930 0.26 -0.4
1,631,455 - ABIE41_RS07930 0.26 -1.3
1,631,455 - ABIE41_RS07930 0.26 +0.1
1,631,541 + ABIE41_RS07930 0.34 +2.6
1,631,542 - ABIE41_RS07930 0.35 +1.8
1,631,790 + ABIE41_RS07930 0.58 +0.9
1,631,790 + ABIE41_RS07930 0.58 -0.9
1,631,790 + ABIE41_RS07930 0.58 -0.2
1,631,790 + ABIE41_RS07930 0.58 +0.6
1,631,790 + ABIE41_RS07930 0.58 -0.3
1,631,791 - ABIE41_RS07930 0.58 -0.4
1,631,791 - ABIE41_RS07930 0.58 -0.1
1,631,791 - ABIE41_RS07930 0.58 -0.4
1,631,791 - ABIE41_RS07930 0.58 +0.2
1,631,791 - ABIE41_RS07930 0.58 +0.5
1,631,854 - ABIE41_RS07930 0.64 +0.1
1,632,303 + -0.2
1,632,304 - +0.2
1,632,304 - +0.0
1,632,429 - +0.6
1,632,429 - +0.3
1,632,740 + ABIE41_RS07935 0.45 -0.1
1,632,740 + ABIE41_RS07935 0.45 -0.8
1,632,741 - ABIE41_RS07935 0.45 -0.8
1,632,741 - ABIE41_RS07935 0.45 -0.6
1,632,741 - ABIE41_RS07935 0.45 +0.8
1,633,106 + -0.2
1,633,106 + -0.7
1,633,106 + -0.2
1,633,106 + -1.5
1,633,106 + +0.0
1,633,106 + +0.7
1,633,107 - -2.8
1,633,107 - -0.6
1,633,128 + -0.1
1,633,150 + +1.0
1,633,207 + +0.6
1,633,207 + -1.0
1,633,207 + -1.0
1,633,207 + +0.3
1,633,208 - -0.8
1,633,208 - -0.3

Or see this region's nucleotide sequence