Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS06035 and ABID97_RS06040 are separated by 100 nucleotides ABID97_RS06040 and ABID97_RS06045 overlap by 4 nucleotides ABID97_RS06045 and ABID97_RS06050 overlap by 4 nucleotides
ABID97_RS06035: ABID97_RS06035 - UdgX family uracil-DNA binding protein, at 1,276,495 to 1,277,961
_RS06035
ABID97_RS06040: ABID97_RS06040 - dihydroorotase, at 1,278,062 to 1,279,093
_RS06040
ABID97_RS06045: ABID97_RS06045 - NYN domain-containing protein, at 1,279,090 to 1,279,932
_RS06045
ABID97_RS06050: ABID97_RS06050 - DUF3025 domain-containing protein, at 1,279,929 to 1,280,672
_RS06050
Position (kb) 1278
1279
1280 Strain fitness (log2 ratio) -1
0
1 at 1277.137 kb on + strand, within ABID97_RS06035 at 1277.137 kb on + strand, within ABID97_RS06035 at 1277.137 kb on + strand, within ABID97_RS06035 at 1277.137 kb on + strand, within ABID97_RS06035 at 1277.138 kb on - strand, within ABID97_RS06035 at 1277.138 kb on - strand, within ABID97_RS06035 at 1277.140 kb on + strand, within ABID97_RS06035 at 1277.141 kb on - strand, within ABID97_RS06035 at 1277.141 kb on - strand, within ABID97_RS06035 at 1277.590 kb on + strand, within ABID97_RS06035 at 1277.591 kb on - strand, within ABID97_RS06035 at 1277.621 kb on - strand, within ABID97_RS06035 at 1278.858 kb on - strand, within ABID97_RS06040 at 1278.884 kb on + strand, within ABID97_RS06040 at 1279.210 kb on + strand, within ABID97_RS06045 at 1279.211 kb on - strand, within ABID97_RS06045 at 1279.484 kb on - strand, within ABID97_RS06045 at 1279.484 kb on - strand, within ABID97_RS06045
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 1,277,137 + ABID97_RS06035 0.44 -0.3 1,277,137 + ABID97_RS06035 0.44 +0.6 1,277,137 + ABID97_RS06035 0.44 -0.0 1,277,137 + ABID97_RS06035 0.44 -1.1 1,277,138 - ABID97_RS06035 0.44 +0.2 1,277,138 - ABID97_RS06035 0.44 -0.7 1,277,140 + ABID97_RS06035 0.44 -0.9 1,277,141 - ABID97_RS06035 0.44 +0.5 1,277,141 - ABID97_RS06035 0.44 +0.1 1,277,590 + ABID97_RS06035 0.75 +0.5 1,277,591 - ABID97_RS06035 0.75 +0.1 1,277,621 - ABID97_RS06035 0.77 -0.3 1,278,858 - ABID97_RS06040 0.77 +1.2 1,278,884 + ABID97_RS06040 0.80 +0.6 1,279,210 + ABID97_RS06045 0.14 +0.2 1,279,211 - ABID97_RS06045 0.14 -0.2 1,279,484 - ABID97_RS06045 0.47 +0.4 1,279,484 - ABID97_RS06045 0.47 -0.4
Or see this region's nucleotide sequence