Strain Fitness in Escherichia coli BW25113 around b1378

Experiment: casaminos (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	casaminos (C)
1,434,295	+	ompN	b1377	0.45	+0.2
1,434,347	-	ompN	b1377	0.50	+0.0
1,434,357	-	ompN	b1377	0.51	+0.4
1,434,397	+	ompN	b1377	0.54	-0.2
1,434,523	+	ompN	b1377	0.65	+0.0
1,434,523	+	ompN	b1377	0.65	+1.5
1,434,570	+	ompN	b1377	0.69	-0.2
1,434,633	+	ompN	b1377	0.75	-0.6
1,434,656	+	ompN	b1377	0.77	-0.0
1,434,753	+	ompN	b1377	0.85	+0.7
1,434,808	+				-0.8
1,435,326	-				+0.3
1,435,374	-				+1.0
1,435,571	+				+1.2
1,435,584	+				-0.2
1,435,584	+				+0.5
1,435,609	-				+0.4
1,435,887	-	ydbK	b1378	0.17	-1.1
1,435,887	-	ydbK	b1378	0.17	+0.6
1,435,915	-	ydbK	b1378	0.18	+0.1
1,435,915	-	ydbK	b1378	0.18	-1.2
1,436,058	+	ydbK	b1378	0.22	+0.2
1,436,279	+	ydbK	b1378	0.28	-0.2
1,436,310	-	ydbK	b1378	0.29	-0.1
1,436,510	-	ydbK	b1378	0.35	+0.1
1,436,561	+	ydbK	b1378	0.36	+1.1
1,436,643	+	ydbK	b1378	0.39	+0.4
1,436,748	-	ydbK	b1378	0.42	+0.2
1,436,857	-	ydbK	b1378	0.45	-0.3
1,437,029	-	ydbK	b1378	0.50	+0.4
1,437,120	+	ydbK	b1378	0.52	-0.7
1,437,120	+	ydbK	b1378	0.52	+0.5
1,437,254	-	ydbK	b1378	0.56	-0.8
1,437,369	+	ydbK	b1378	0.59	-1.2
1,437,799	-	ydbK	b1378	0.71	-3.6
1,437,832	+	ydbK	b1378	0.72	+0.4
1,438,460	+				+0.4
1,438,501	+				-0.7
1,438,540	-				-0.2
1,438,709	-				+0.8
1,438,815	+				-0.6
1,438,823	-				-0.2
1,438,926	-				-0.3
1,438,926	-				-0.2
1,438,997	+				-0.1
1,438,998	-				-0.5
1,439,084	-				+0.2
1,439,084	-				+0.3
1,439,137	-	ydbJ	b4529	0.21	+0.3
1,439,365	+				+0.4
1,439,401	-	hslJ	b1379	0.13	+0.4
1,439,561	-	hslJ	b1379	0.51	-0.2
1,439,561	-	hslJ	b1379	0.51	+0.2
1,439,591	+	hslJ	b1379	0.58	+0.7
1,439,591	+	hslJ	b1379	0.58	+0.7
1,439,654	+	hslJ	b1379	0.73	+0.6